RNA–Protein interactions for RNA: ENST00000503628.5

DDR1-250, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-250ENST00000503628 TMEM86AQ8N2M4 240 aa16.86■□□□□ 0.29
DDR1-250ENST00000503628 MINDY1Q8N5J2 469 aa16.86■□□□□ 0.29
DDR1-250ENST00000503628 POMGNT1Q8WZA1 660 aa16.86■□□□□ 0.29
DDR1-250ENST00000503628 DNAJC19Q96DA6 116 aa16.86■□□□□ 0.29
DDR1-250ENST00000503628 LRRC27Q9C0I9 530 aa16.86■□□□□ 0.29
DDR1-250ENST00000503628 RNF38Q9H0F5 515 aa16.86■□□□□ 0.29
DDR1-250ENST00000503628 CAPN10Q9HC96 672 aa16.86■□□□□ 0.29
DDR1-250ENST00000503628 PCDH15Q96QU1 1955 aa16.86■□□□□ 0.29
DDR1-250ENST00000503628 A0A0A0MRY4 1105 aa16.85■□□□□ 0.29
DDR1-250ENST00000503628 AP5Z1O43299 807 aa16.85■□□□□ 0.29
DDR1-250ENST00000503628 ATP2C2O75185 946 aa16.85■□□□□ 0.29
DDR1-250ENST00000503628 SLFN14P0C7P3 912 aa16.85■□□□□ 0.29
DDR1-250ENST00000503628 ADSSP30520 456 aa16.85■□□□□ 0.29
DDR1-250ENST00000503628 MAGEA11P43364 429 aa16.85■□□□□ 0.29
DDR1-250ENST00000503628 SYKP43405 635 aa16.85■□□□□ 0.29
DDR1-250ENST00000503628 NDUFA8P51970 172 aa16.85■□□□□ 0.29
DDR1-250ENST00000503628 RPL6Q02878 288 aaKnown RBP16.85■□□□□ 0.29
DDR1-250ENST00000503628 COL28A1Q2UY09 1125 aa16.85■□□□□ 0.29
DDR1-250ENST00000503628 RHBDF2Q6PJF5 856 aa16.85■□□□□ 0.29
DDR1-250ENST00000503628 NT5DC4Q86YG4 428 aa16.85■□□□□ 0.29
DDR1-250ENST00000503628 CEP57L1Q8IYX8 460 aa16.85■□□□□ 0.29
DDR1-250ENST00000503628 C1orf127Q8N9H9 656 aa16.85■□□□□ 0.29
DDR1-250ENST00000503628 FUBP3Q96I24 572 aaKnown RBP eCLIP16.85■□□□□ 0.29
DDR1-250ENST00000503628 CAMK1GQ96NX5 476 aa16.85■□□□□ 0.29
DDR1-250ENST00000503628 GOLPH3LQ9H4A5 285 aa16.85■□□□□ 0.29
DDR1-250ENST00000503628 ARHGEF4Q9NR80 690 aa16.85■□□□□ 0.29
DDR1-250ENST00000503628 TRPM5Q9NZQ8 1165 aa16.85■□□□□ 0.29
DDR1-250ENST00000503628 USP25Q9UHP3 1055 aa16.85■□□□□ 0.29
DDR1-250ENST00000503628 SNX9Q9Y5X1 595 aa16.85■□□□□ 0.29
DDR1-250ENST00000503628 PLXNB3Q9ULL4 1909 aa16.85■□□□□ 0.29
DDR1-250ENST00000503628 ARHGAP33O14559 1287 aa16.84■□□□□ 0.29
DDR1-250ENST00000503628 GABRDO14764 452 aa16.84■□□□□ 0.29
DDR1-250ENST00000503628 ACTN4O43707 911 aaKnown RBP16.84■□□□□ 0.29
DDR1-250ENST00000503628 PFKLP17858 780 aa16.84■□□□□ 0.29
DDR1-250ENST00000503628 PCSK1P29120 753 aa16.84■□□□□ 0.29
DDR1-250ENST00000503628 ABCD1P33897 745 aa16.84■□□□□ 0.29
DDR1-250ENST00000503628 EIF2DP41214 584 aaKnown RBP16.84■□□□□ 0.29
DDR1-250ENST00000503628 GRIA2P42262 883 aa16.84■□□□□ 0.29
DDR1-250ENST00000503628 TNFRSF4P43489 277 aa16.84■□□□□ 0.29
DDR1-250ENST00000503628 LHX1P48742 406 aa16.84■□□□□ 0.29
DDR1-250ENST00000503628 USP46P62068 366 aa16.84■□□□□ 0.29
DDR1-250ENST00000503628 SLC7A9P82251 487 aa16.84■□□□□ 0.29
DDR1-250ENST00000503628 KDSRQ06136 332 aa16.84■□□□□ 0.29
DDR1-250ENST00000503628 ZNF33AQ06730 810 aa16.84■□□□□ 0.29
DDR1-250ENST00000503628 HNRNPDQ14103 355 aaKnown RBP16.84■□□□□ 0.29
DDR1-250ENST00000503628 TRIP6Q15654 476 aaKnown RBP16.84■□□□□ 0.29
DDR1-250ENST00000503628 FAM171BQ6P995 826 aa16.84■□□□□ 0.29
DDR1-250ENST00000503628 ADGRF2Q8IZF7 708 aa16.84■□□□□ 0.29
DDR1-250ENST00000503628 CSGALNACT2Q8N6G5 542 aa16.84■□□□□ 0.29
DDR1-250ENST00000503628 FAM84AQ96KN4 292 aa16.84■□□□□ 0.29
DDR1-250ENST00000503628 SPATA17Q96L03 361 aa16.84■□□□□ 0.29
DDR1-250ENST00000503628 SMPD4Q9NXE4 827 aa16.84■□□□□ 0.29
DDR1-250ENST00000503628 GDAP2Q9NXN4 497 aa16.84■□□□□ 0.29
DDR1-250ENST00000503628 SERTAD1Q9UHV2 236 aa16.84■□□□□ 0.29
DDR1-250ENST00000503628 CPQQ9Y646 472 aa16.84■□□□□ 0.29
DDR1-250ENST00000503628 SLC9A3R1O14745 358 aaPredicted RBP16.83■□□□□ 0.28
DDR1-250ENST00000503628 SH3BP5O60239 455 aa16.83■□□□□ 0.28
DDR1-250ENST00000503628 BDNFP23560 247 aa16.83■□□□□ 0.28
DDR1-250ENST00000503628 GRIK1P39086 918 aa16.83■□□□□ 0.28
DDR1-250ENST00000503628 POSTNQ15063 836 aa16.83■□□□□ 0.28
DDR1-250ENST00000503628 CNNM4Q6P4Q7 775 aa16.83■□□□□ 0.28
DDR1-250ENST00000503628 SLC36A4Q6YBV0 504 aa16.83■□□□□ 0.28
DDR1-250ENST00000503628 LRRC52Q8N7C0 313 aa16.83■□□□□ 0.28
DDR1-250ENST00000503628 PNPLA1Q8N8W4 532 aa16.83■□□□□ 0.28
DDR1-250ENST00000503628 ZSWIM2Q8NEG5 633 aa16.83■□□□□ 0.28
DDR1-250ENST00000503628 CXorf38Q8TB03 319 aa16.83■□□□□ 0.28
DDR1-250ENST00000503628 CACTINQ8WUQ7 758 aaKnown RBP16.83■□□□□ 0.28
DDR1-250ENST00000503628 C7orf25Q9BPX7 421 aa16.83■□□□□ 0.28
DDR1-250ENST00000503628 FAM213AQ9BRX8 229 aa16.83■□□□□ 0.28
DDR1-250ENST00000503628 TRIM9Q9C026 710 aa16.83■□□□□ 0.28
DDR1-250ENST00000503628 ST6GALNAC4Q9H4F1 302 aa16.83■□□□□ 0.28
DDR1-250ENST00000503628 MAGEC2Q9UBF1 373 aaPredicted RBP16.83■□□□□ 0.28
DDR1-250ENST00000503628 SEL1LQ9UBV2 794 aa16.83■□□□□ 0.28
DDR1-250ENST00000503628 BPTFQ12830 3046 aa16.83■□□□□ 0.28
DDR1-250ENST00000503628 FRMD3A2A2Y4 597 aa16.82■□□□□ 0.28
DDR1-250ENST00000503628 ZNF840PA6NDX5 716 aa16.82■□□□□ 0.28
DDR1-250ENST00000503628 ABL1P00519 1130 aa16.82■□□□□ 0.28
DDR1-250ENST00000503628 KRT19P08727 400 aa16.82■□□□□ 0.28
DDR1-250ENST00000503628 ADH5P11766 374 aa16.82■□□□□ 0.28
DDR1-250ENST00000503628 IDEP14735 1019 aa16.82■□□□□ 0.28
DDR1-250ENST00000503628 GAP43P17677 238 aa16.82■□□□□ 0.28
DDR1-250ENST00000503628 GABRG2P18507 467 aa16.82■□□□□ 0.28
DDR1-250ENST00000503628 LMO2P25791 158 aa16.82■□□□□ 0.28
DDR1-250ENST00000503628 AFMP43652 599 aa16.82■□□□□ 0.28
DDR1-250ENST00000503628 SOWAHAQ2M3V2 549 aa16.82■□□□□ 0.28
DDR1-250ENST00000503628 C4orf50Q6ZRC1 276 aa16.82■□□□□ 0.28
DDR1-250ENST00000503628 DENND5BQ6ZUT9 1274 aa16.82■□□□□ 0.28
DDR1-250ENST00000503628 RABEPKQ7Z6M1 372 aa16.82■□□□□ 0.28
DDR1-250ENST00000503628 SFR1Q86XK3 245 aa16.82■□□□□ 0.28
DDR1-250ENST00000503628 CCDC65Q8IXS2 484 aa16.82■□□□□ 0.28
DDR1-250ENST00000503628 PHTF2Q8N3S3 785 aa16.82■□□□□ 0.28
DDR1-250ENST00000503628 TOP6BLQ8N6T0 577 aa16.82■□□□□ 0.28
DDR1-250ENST00000503628 KIAA1958Q8N8K9 716 aa16.82■□□□□ 0.28
DDR1-250ENST00000503628 ADAMTS14Q8WXS8 1223 aa16.82■□□□□ 0.28
DDR1-250ENST00000503628 CCDC86Q9H6F5 360 aaKnown RBP16.82■□□□□ 0.28
DDR1-250ENST00000503628 PANK4Q9NVE7 773 aa16.82■□□□□ 0.28
DDR1-250ENST00000503628 DNAAF2Q9NVR5 837 aaKnown RBP16.82■□□□□ 0.28
DDR1-250ENST00000503628 CFAP97Q9P2B7 532 aa16.82■□□□□ 0.28
DDR1-250ENST00000503628 PCDHB9Q9Y5E1 797 aa16.82■□□□□ 0.28
DDR1-250ENST00000503628 SMG1Q96Q15 3661 aaKnown RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms