RNA–Protein interactions for RNA: ENST00000503255.5

GYPB-203, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 486 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-203ENST00000503255 ZNF549Q6P9A3 640 aa4.3□□□□□ -1.72
GYPB-203ENST00000503255 COLCA1Q6ZS62 124 aa4.3□□□□□ -1.72
GYPB-203ENST00000503255 LIX1LQ8IVB5 337 aa4.3□□□□□ -1.72
GYPB-203ENST00000503255 SFTPA1Q8IWL2 248 aa4.3□□□□□ -1.72
GYPB-203ENST00000503255 BPIFB1Q8TDL5 484 aa4.3□□□□□ -1.72
GYPB-203ENST00000503255 CHMP4CQ96CF2 233 aa4.3□□□□□ -1.72
GYPB-203ENST00000503255 NT5C1BQ96P26 610 aa4.3□□□□□ -1.72
GYPB-203ENST00000503255 CGRRF1Q99675 332 aa4.3□□□□□ -1.72
GYPB-203ENST00000503255 PI4KBQ9UBF8 816 aa4.3□□□□□ -1.72
GYPB-203ENST00000503255 TTC3P53804 2025 aa4.29□□□□□ -1.72
GYPB-203ENST00000503255 SMAD6O43541 496 aaKnown RBP4.29□□□□□ -1.72
GYPB-203ENST00000503255 ALDH1L1O75891 902 aa4.29□□□□□ -1.72
GYPB-203ENST00000503255 ATF7P17544 494 aaPredicted RBP4.29□□□□□ -1.72
GYPB-203ENST00000503255 NEK2P51955 445 aa4.29□□□□□ -1.72
GYPB-203ENST00000503255 YPEL5P62699 121 aa4.29□□□□□ -1.72
GYPB-203ENST00000503255 ID2Q02363 134 aa4.29□□□□□ -1.72
GYPB-203ENST00000503255 PLEKHG6Q3KR16 790 aa4.29□□□□□ -1.72
GYPB-203ENST00000503255 MGAT5BQ3V5L5 792 aa4.29□□□□□ -1.72
GYPB-203ENST00000503255 UBAP2Q5T6F2 1119 aaKnown RBP4.29□□□□□ -1.72
GYPB-203ENST00000503255 RANBP10Q6VN20 620 aa4.29□□□□□ -1.72
GYPB-203ENST00000503255 GRAMD1CQ8IYS0 662 aa4.29□□□□□ -1.72
GYPB-203ENST00000503255 MAFAQ8NHW3 353 aaPredicted RBP4.29□□□□□ -1.72
GYPB-203ENST00000503255 STAG1Q8WVM7 1258 aa4.29□□□□□ -1.72
GYPB-203ENST00000503255 CTHRC1Q96CG8 243 aa4.29□□□□□ -1.72
GYPB-203ENST00000503255 HSPBAP1Q96EW2 488 aa4.29□□□□□ -1.72
GYPB-203ENST00000503255 CDK5RAP3Q96JB5 506 aa4.29□□□□□ -1.72
GYPB-203ENST00000503255 ZBTB45Q96K62 511 aaPredicted RBP4.29□□□□□ -1.72
GYPB-203ENST00000503255 LYZL4Q96KX0 146 aa4.29□□□□□ -1.72
GYPB-203ENST00000503255 MS4A7Q9GZW8 240 aaPredicted RBP4.29□□□□□ -1.72
GYPB-203ENST00000503255 DRG1Q9Y295 367 aaKnown RBP4.29□□□□□ -1.72
GYPB-203ENST00000503255 MED16Q9Y2X0 877 aa4.29□□□□□ -1.72
GYPB-203ENST00000503255 B4DGG1 531 aa4.28□□□□□ -1.72
GYPB-203ENST00000503255 OAZ2O95190 189 aa4.28□□□□□ -1.72
GYPB-203ENST00000503255 CTSAP10619 480 aa4.28□□□□□ -1.72
GYPB-203ENST00000503255 VCAM1P19320 739 aa4.28□□□□□ -1.72
GYPB-203ENST00000503255 CDKN2AP42771 156 aaKnown RBP4.28□□□□□ -1.72
GYPB-203ENST00000503255 SATB1Q01826 763 aa4.28□□□□□ -1.72
GYPB-203ENST00000503255 PTCHD4Q6ZW05 846 aa4.28□□□□□ -1.72
GYPB-203ENST00000503255 PIM3Q86V86 326 aa4.28□□□□□ -1.72
GYPB-203ENST00000503255 COL23A1Q86Y22 540 aaPredicted RBP4.28□□□□□ -1.72
GYPB-203ENST00000503255 ANKRD13BQ86YJ7 626 aa4.28□□□□□ -1.72
GYPB-203ENST00000503255 MPP5Q8N3R9 675 aa4.28□□□□□ -1.72
GYPB-203ENST00000503255 FAM234AQ9H0X4 552 aa4.28□□□□□ -1.72
GYPB-203ENST00000503255 LUC7L2Q9Y383 392 aaKnown RBP4.28□□□□□ -1.72
GYPB-203ENST00000503255 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.28□□□□□ -1.72
GYPB-203ENST00000503255 HS3ST3B1Q9Y662 390 aa4.28□□□□□ -1.72
GYPB-203ENST00000503255 PSMD9O00233 223 aa4.27□□□□□ -1.73
GYPB-203ENST00000503255 SPRY2O43597 315 aa4.27□□□□□ -1.73
GYPB-203ENST00000503255 RNF8O76064 485 aa4.27□□□□□ -1.73
GYPB-203ENST00000503255 CYP2C9P11712 490 aa4.27□□□□□ -1.73
GYPB-203ENST00000503255 CREB1P16220 341 aa4.27□□□□□ -1.73
GYPB-203ENST00000503255 CFHR1Q03591 330 aa4.27□□□□□ -1.73
GYPB-203ENST00000503255 ZNF267Q14586 743 aaPredicted RBP4.27□□□□□ -1.73
GYPB-203ENST00000503255 TTF1Q15361 905 aaPredicted RBP4.27□□□□□ -1.73
GYPB-203ENST00000503255 ZDHHC24Q6UX98 284 aa4.27□□□□□ -1.73
GYPB-203ENST00000503255 DCDC5Q6ZRR9 648 aa4.27□□□□□ -1.73
GYPB-203ENST00000503255 KCTD20Q7Z5Y7 419 aa4.27□□□□□ -1.73
GYPB-203ENST00000503255 PELI3Q8N2H9 469 aa4.27□□□□□ -1.73
GYPB-203ENST00000503255 DNAJB14Q8TBM8 379 aa4.27□□□□□ -1.73
GYPB-203ENST00000503255 RSPRY1Q96DX4 576 aa4.27□□□□□ -1.73
GYPB-203ENST00000503255 MLXIPQ9HAP2 919 aa4.27□□□□□ -1.73
GYPB-203ENST00000503255 AASDHPPTQ9NRN7 309 aa4.27□□□□□ -1.73
GYPB-203ENST00000503255 MGAT4CQ9UBM8 478 aa4.27□□□□□ -1.73
GYPB-203ENST00000503255 TCEAL9Q9UHQ7 104 aa4.27□□□□□ -1.73
GYPB-203ENST00000503255 STXBP5LQ9Y2K9 1186 aa4.27□□□□□ -1.73
GYPB-203ENST00000503255 A0A087WWL8 130 aa4.26□□□□□ -1.73
GYPB-203ENST00000503255 FAM90A8PA6NJQ4 464 aa4.26□□□□□ -1.73
GYPB-203ENST00000503255 BTN3A1O00481 513 aa4.26□□□□□ -1.73
GYPB-203ENST00000503255 TOMM40O96008 361 aa4.26□□□□□ -1.73
GYPB-203ENST00000503255 THP07101 528 aa4.26□□□□□ -1.73
GYPB-203ENST00000503255 CT47B1P0C2W7 299 aaPredicted RBP4.26□□□□□ -1.73
GYPB-203ENST00000503255 FAM90A13PP0C7W8 464 aa4.26□□□□□ -1.73
GYPB-203ENST00000503255 FAM90A24PP0C7X0 464 aa4.26□□□□□ -1.73
GYPB-203ENST00000503255 NPR1P16066 1061 aa4.26□□□□□ -1.73
GYPB-203ENST00000503255 THBS4P35443 961 aa4.26□□□□□ -1.73
GYPB-203ENST00000503255 SUMO2P61956 95 aaKnown RBP4.26□□□□□ -1.73
GYPB-203ENST00000503255 SLC14A1Q13336 389 aa4.26□□□□□ -1.73
GYPB-203ENST00000503255 MTX1Q13505 466 aa4.26□□□□□ -1.73
GYPB-203ENST00000503255 PIN1Q13526 163 aaPredicted RBP4.26□□□□□ -1.73
GYPB-203ENST00000503255 LARS2Q15031 903 aaKnown RBP4.26□□□□□ -1.73
GYPB-203ENST00000503255 ZNF585BQ52M93 769 aa4.26□□□□□ -1.73
GYPB-203ENST00000503255 TMEM240Q5SV17 173 aa4.26□□□□□ -1.73
GYPB-203ENST00000503255 GAS2L3Q86XJ1 694 aa4.26□□□□□ -1.73
GYPB-203ENST00000503255 ARFGAP1Q8N6T3 406 aa4.26□□□□□ -1.73
GYPB-203ENST00000503255 JDP2Q8WYK2 163 aa4.26□□□□□ -1.73
GYPB-203ENST00000503255 HPS3Q969F9 1004 aa4.26□□□□□ -1.73
GYPB-203ENST00000503255 HS6ST2Q96MM7 605 aa4.26□□□□□ -1.73
GYPB-203ENST00000503255 CTAGE1Q96RT6 745 aa4.26□□□□□ -1.73
GYPB-203ENST00000503255 ZBTB40Q9NUA8 1239 aa4.26□□□□□ -1.73
GYPB-203ENST00000503255 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.26□□□□□ -1.73
GYPB-203ENST00000503255 ASAP1Q9ULH1 1129 aa4.26□□□□□ -1.73
GYPB-203ENST00000503255 CLIC1O00299 241 aa4.25□□□□□ -1.73
GYPB-203ENST00000503255 U2AF1L5P0DN76 240 aaPredicted RBP4.25□□□□□ -1.73
GYPB-203ENST00000503255 KITP10721 976 aa4.25□□□□□ -1.73
GYPB-203ENST00000503255 WNT3P56703 355 aa4.25□□□□□ -1.73
GYPB-203ENST00000503255 U2AF1Q01081 240 aaKnown RBP eCLIP4.25□□□□□ -1.73
GYPB-203ENST00000503255 RHDQ02161 417 aa4.25□□□□□ -1.73
GYPB-203ENST00000503255 CCNIQ14094 377 aa4.25□□□□□ -1.73
GYPB-203ENST00000503255 FGL2Q14314 439 aa4.25□□□□□ -1.73
GYPB-203ENST00000503255 NPY5RQ15761 445 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms