RNA–Protein interactions for RNA: ENST00000498810.1

CDK11A-222, Transcript of cyclin dependent kinase 11A, human

TSL 2

Gene CDK11A, Length 574 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK11A-222	ENST00000498810	KIF9	Q9HAQ2	790 aa		11.34	□□□□□ -0.59
CDK11A-222	ENST00000498810	CRTAC1	Q9NQ79	661 aa		11.34	□□□□□ -0.59
CDK11A-222	ENST00000498810	FAM86C1	Q9NVL1	165 aa		11.34	□□□□□ -0.59
CDK11A-222	ENST00000498810	PCDHA5	Q9Y5H7	936 aa		11.34	□□□□□ -0.59
CDK11A-222	ENST00000498810	PIAS3	Q9Y6X2	628 aa		11.34	□□□□□ -0.59
CDK11A-222	ENST00000498810	TRAV19	A0A0A6YYK7	116 aa		11.33	□□□□□ -0.6
CDK11A-222	ENST00000498810	BICDL2	A1A5D9	508 aa		11.33	□□□□□ -0.6
CDK11A-222	ENST00000498810		F8VP50	259 aa		11.33	□□□□□ -0.6
CDK11A-222	ENST00000498810	BIN1	O00499	593 aa		11.33	□□□□□ -0.6
CDK11A-222	ENST00000498810	MAN2B1	O00754	1011 aa		11.33	□□□□□ -0.6
CDK11A-222	ENST00000498810	SLC16A3	O15427	465 aa	Known RBP	11.33	□□□□□ -0.6
CDK11A-222	ENST00000498810	PI15	O43692	258 aa		11.33	□□□□□ -0.6
CDK11A-222	ENST00000498810	NOL4	O94818	638 aa		11.33	□□□□□ -0.6
CDK11A-222	ENST00000498810	C4BPA	P04003	597 aa	Known RBP	11.33	□□□□□ -0.6
CDK11A-222	ENST00000498810	NPR3	P17342	541 aa		11.33	□□□□□ -0.6
CDK11A-222	ENST00000498810	CD58	P19256	250 aa		11.33	□□□□□ -0.6
CDK11A-222	ENST00000498810	CD72	P21854	359 aa		11.33	□□□□□ -0.6
CDK11A-222	ENST00000498810	CTSO	P43234	321 aa	Predicted RBP	11.33	□□□□□ -0.6
CDK11A-222	ENST00000498810	CDH8	P55286	799 aa		11.33	□□□□□ -0.6
CDK11A-222	ENST00000498810	LRRC63	Q05C16	580 aa		11.33	□□□□□ -0.6
CDK11A-222	ENST00000498810	ARHGAP29	Q52LW3	1261 aa		11.33	□□□□□ -0.6
CDK11A-222	ENST00000498810	WDR44	Q5JSH3	913 aa		11.33	□□□□□ -0.6
CDK11A-222	ENST00000498810	KRT39	Q6A163	491 aa		11.33	□□□□□ -0.6
CDK11A-222	ENST00000498810	SPOPL	Q6IQ16	392 aa		11.33	□□□□□ -0.6
CDK11A-222	ENST00000498810	FAM171B	Q6P995	826 aa		11.33	□□□□□ -0.6
CDK11A-222	ENST00000498810	CMTM8	Q8IZV2	173 aa		11.33	□□□□□ -0.6
CDK11A-222	ENST00000498810	CELF5	Q8N6W0	485 aa	Known RBP	11.33	□□□□□ -0.6
CDK11A-222	ENST00000498810	ENGASE	Q8NFI3	743 aa		11.33	□□□□□ -0.6
CDK11A-222	ENST00000498810	TMEM174	Q8WUU8	243 aa		11.33	□□□□□ -0.6
CDK11A-222	ENST00000498810	TRMT2B	Q96GJ1	504 aa	Known RBP	11.33	□□□□□ -0.6
CDK11A-222	ENST00000498810	SMARCD1	Q96GM5	515 aa		11.33	□□□□□ -0.6
CDK11A-222	ENST00000498810	SLITRK1	Q96PX8	696 aa		11.33	□□□□□ -0.6
CDK11A-222	ENST00000498810	INSM2	Q96T92	566 aa	Predicted RBP	11.33	□□□□□ -0.6
CDK11A-222	ENST00000498810	PKMYT1	Q99640	499 aa		11.33	□□□□□ -0.6
CDK11A-222	ENST00000498810	MKNK1	Q9BUB5	465 aa		11.33	□□□□□ -0.6
CDK11A-222	ENST00000498810	NIF3L1	Q9GZT8	377 aa		11.33	□□□□□ -0.6
CDK11A-222	ENST00000498810	SMG9	Q9H0W8	520 aa	Known RBP	11.33	□□□□□ -0.6
CDK11A-222	ENST00000498810	GZF1	Q9H116	711 aa	Predicted RBP	11.33	□□□□□ -0.6
CDK11A-222	ENST00000498810	XYLT2	Q9H1B5	865 aa		11.33	□□□□□ -0.6
CDK11A-222	ENST00000498810	TRPV4	Q9HBA0	871 aa		11.33	□□□□□ -0.6
CDK11A-222	ENST00000498810	TMEM8A	Q9HCN3	771 aa		11.33	□□□□□ -0.6
CDK11A-222	ENST00000498810	LTB4R2	Q9NPC1	389 aa		11.33	□□□□□ -0.6
CDK11A-222	ENST00000498810	KRT82	Q9NSB4	513 aa		11.33	□□□□□ -0.6
CDK11A-222	ENST00000498810	SPATA6	Q9NWH7	488 aa	Predicted RBP	11.33	□□□□□ -0.6
CDK11A-222	ENST00000498810	TRPM5	Q9NZQ8	1165 aa		11.33	□□□□□ -0.6
CDK11A-222	ENST00000498810	CTNND2	Q9UQB3	1225 aa		11.33	□□□□□ -0.6
CDK11A-222	ENST00000498810	TRIM49B	A6NDI0	452 aa		11.32	□□□□□ -0.6
CDK11A-222	ENST00000498810	FAM170B	A6NMN3	283 aa		11.32	□□□□□ -0.6
CDK11A-222	ENST00000498810	CHAD	O15335	359 aa		11.32	□□□□□ -0.6
CDK11A-222	ENST00000498810	VNN1	O95497	513 aa		11.32	□□□□□ -0.6
CDK11A-222	ENST00000498810	PRAMEF12	O95522	483 aa		11.32	□□□□□ -0.6
CDK11A-222	ENST00000498810	ASS1	P00966	412 aa	Known RBP	11.32	□□□□□ -0.6
CDK11A-222	ENST00000498810	FAM163B	P0C2L3	166 aa		11.32	□□□□□ -0.6
CDK11A-222	ENST00000498810	USP17L7	P0C7H9	530 aa		11.32	□□□□□ -0.6
CDK11A-222	ENST00000498810	MAGEA9	P43362	315 aa		11.32	□□□□□ -0.6
CDK11A-222	ENST00000498810	NDST1	P52848	882 aa		11.32	□□□□□ -0.6
CDK11A-222	ENST00000498810	STARD6	P59095	220 aa		11.32	□□□□□ -0.6
CDK11A-222	ENST00000498810	UBE2H	P62256	183 aa		11.32	□□□□□ -0.6
CDK11A-222	ENST00000498810	CLDN10	P78369	228 aa		11.32	□□□□□ -0.6
CDK11A-222	ENST00000498810	FKBP3	Q00688	224 aa	Known RBP	11.32	□□□□□ -0.6
CDK11A-222	ENST00000498810	PTS	Q03393	145 aa		11.32	□□□□□ -0.6
CDK11A-222	ENST00000498810	ORC1	Q13415	861 aa		11.32	□□□□□ -0.6
CDK11A-222	ENST00000498810	ANGPT1	Q15389	498 aa		11.32	□□□□□ -0.6
CDK11A-222	ENST00000498810	TXNDC8	Q6A555	127 aa		11.32	□□□□□ -0.6
CDK11A-222	ENST00000498810	ACOT1	Q86TX2	421 aa		11.32	□□□□□ -0.6
CDK11A-222	ENST00000498810	FAM35A	Q86V20	835 aa		11.32	□□□□□ -0.6
CDK11A-222	ENST00000498810	TTC8	Q8TAM2	541 aa		11.32	□□□□□ -0.6
CDK11A-222	ENST00000498810	TAS1R2	Q8TE23	839 aa		11.32	□□□□□ -0.6
CDK11A-222	ENST00000498810	FAM3C	Q92520	227 aa		11.32	□□□□□ -0.6
CDK11A-222	ENST00000498810	JAKMIP2	Q96AA8	810 aa		11.32	□□□□□ -0.6
CDK11A-222	ENST00000498810	MSANTD3	Q96H12	275 aa		11.32	□□□□□ -0.6
CDK11A-222	ENST00000498810	SPATA17	Q96L03	361 aa		11.32	□□□□□ -0.6
CDK11A-222	ENST00000498810	CEP295NL	Q96MC4	621 aa		11.32	□□□□□ -0.6
CDK11A-222	ENST00000498810	ZNF518B	Q9C0D4	1074 aa		11.32	□□□□□ -0.6
CDK11A-222	ENST00000498810	NACA2	Q9H009	215 aa		11.32	□□□□□ -0.6
CDK11A-222	ENST00000498810	ZNF395	Q9H8N7	513 aa	Predicted RBP	11.32	□□□□□ -0.6
CDK11A-222	ENST00000498810	VRTN	Q9H8Y1	702 aa		11.32	□□□□□ -0.6
CDK11A-222	ENST00000498810	DMAP1	Q9NPF5	467 aa	Predicted RBP	11.32	□□□□□ -0.6
CDK11A-222	ENST00000498810	FAM49B	Q9NUQ9	324 aa		11.32	□□□□□ -0.6
CDK11A-222	ENST00000498810	OBP2A	Q9NY56	170 aa		11.32	□□□□□ -0.6
CDK11A-222	ENST00000498810	MAN1B1	Q9UKM7	699 aa		11.32	□□□□□ -0.6
CDK11A-222	ENST00000498810	CLDN5	O00501	218 aa		11.31	□□□□□ -0.6
CDK11A-222	ENST00000498810	LAMTOR5	O43504	91 aa		11.31	□□□□□ -0.6
CDK11A-222	ENST00000498810	GADD45B	O75293	160 aa	Predicted RBP	11.31	□□□□□ -0.6
CDK11A-222	ENST00000498810	RTN3	O95197	1032 aa	Predicted RBP	11.31	□□□□□ -0.6
CDK11A-222	ENST00000498810	CCDC130	P13994	396 aa		11.31	□□□□□ -0.6
CDK11A-222	ENST00000498810	HMGA1	P17096	107 aa	Known RBP	11.31	□□□□□ -0.6
CDK11A-222	ENST00000498810	CCNE1	P24864	410 aa		11.31	□□□□□ -0.6
CDK11A-222	ENST00000498810	ADORA2B	P29275	332 aa		11.31	□□□□□ -0.6
CDK11A-222	ENST00000498810	GTF2H1	P32780	548 aa		11.31	□□□□□ -0.6
CDK11A-222	ENST00000498810	PTGIR	P43119	386 aa		11.31	□□□□□ -0.6
CDK11A-222	ENST00000498810	IFNAR2	P48551	515 aa		11.31	□□□□□ -0.6
CDK11A-222	ENST00000498810	MCCD1	P59942	119 aa	Predicted RBP	11.31	□□□□□ -0.6
CDK11A-222	ENST00000498810	ENPEP	Q07075	957 aa		11.31	□□□□□ -0.6
CDK11A-222	ENST00000498810	PPP3CA	Q08209	521 aa		11.31	□□□□□ -0.6
CDK11A-222	ENST00000498810	TCF15	Q12870	199 aa		11.31	□□□□□ -0.6
CDK11A-222	ENST00000498810	ZCWPW2	Q504Y3	356 aa		11.31	□□□□□ -0.6
CDK11A-222	ENST00000498810	C1orf228	Q6PIY5	440 aa		11.31	□□□□□ -0.6
CDK11A-222	ENST00000498810	ZC3H14	Q6PJT7	736 aa	Known RBP	11.31	□□□□□ -0.6
CDK11A-222	ENST00000498810	LIMS2	Q7Z4I7	341 aa		11.31	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 21 ms