RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 LMAN2Q12907 356 aa17.11■□□□□ 0.33
MUC1-220ENST00000498431 COL9A2Q14055 689 aaPredicted RBP17.11■□□□□ 0.33
MUC1-220ENST00000498431 DUOXA2Q1HG44 320 aa17.11■□□□□ 0.33
MUC1-220ENST00000498431 LY6G5CQ5SRR4 150 aa17.11■□□□□ 0.33
MUC1-220ENST00000498431 KIAA1958Q8N8K9 716 aa17.11■□□□□ 0.33
MUC1-220ENST00000498431 ZFRQ96KR1 1074 aaKnown RBP17.11■□□□□ 0.33
MUC1-220ENST00000498431 ZNF518BQ9C0D4 1074 aa17.11■□□□□ 0.33
MUC1-220ENST00000498431 POLMQ9NP87 494 aaPredicted RBP17.11■□□□□ 0.33
MUC1-220ENST00000498431 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.11■□□□□ 0.33
MUC1-220ENST00000498431 CEP192Q8TEP8 1941 aa17.11■□□□□ 0.33
MUC1-220ENST00000498431 SPAARA0A1B0GVQ0 90 aa17.1■□□□□ 0.33
MUC1-220ENST00000498431 ADH1CP00326 375 aa17.1■□□□□ 0.33
MUC1-220ENST00000498431 PTPN1P18031 435 aaKnown RBP17.1■□□□□ 0.33
MUC1-220ENST00000498431 GNL1P36915 607 aaPredicted RBP17.1■□□□□ 0.33
MUC1-220ENST00000498431 TXLNAP40222 546 aa17.1■□□□□ 0.33
MUC1-220ENST00000498431 STAT6P42226 847 aa17.1■□□□□ 0.33
MUC1-220ENST00000498431 GRIA2P42262 883 aa17.1■□□□□ 0.33
MUC1-220ENST00000498431 PPP3CCP48454 512 aa17.1■□□□□ 0.33
MUC1-220ENST00000498431 HSF5Q4G112 596 aaPredicted RBP17.1■□□□□ 0.33
MUC1-220ENST00000498431 EOGTQ5NDL2 527 aa17.1■□□□□ 0.33
MUC1-220ENST00000498431 TDRD10Q5VZ19 366 aaKnown RBP17.1■□□□□ 0.33
MUC1-220ENST00000498431 LYSMD4Q5XG99 296 aa17.1■□□□□ 0.33
MUC1-220ENST00000498431 SLC23A3Q6PIS1 610 aa17.1■□□□□ 0.33
MUC1-220ENST00000498431 TRAPPC11Q7Z392 1133 aa17.1■□□□□ 0.33
MUC1-220ENST00000498431 PIP4P1Q86T03 277 aa17.1■□□□□ 0.33
MUC1-220ENST00000498431 WDR49Q8IV35 697 aa17.1■□□□□ 0.33
MUC1-220ENST00000498431 DEFB119Q8N690 84 aa17.1■□□□□ 0.33
MUC1-220ENST00000498431 NAT16Q8N8M0 369 aa17.1■□□□□ 0.33
MUC1-220ENST00000498431 OR6B3Q8NGW1 331 aa17.1■□□□□ 0.33
MUC1-220ENST00000498431 WBP2Q969T9 261 aa17.1■□□□□ 0.33
MUC1-220ENST00000498431 B3GNT5Q9BYG0 378 aa17.1■□□□□ 0.33
MUC1-220ENST00000498431 SNX25Q9H3E2 840 aa17.1■□□□□ 0.33
MUC1-220ENST00000498431 HSPBP1Q9NZL4 362 aa17.1■□□□□ 0.33
MUC1-220ENST00000498431 PILRBQ9UKJ0 227 aa17.1■□□□□ 0.33
MUC1-220ENST00000498431 KLK13Q9UKR3 277 aa17.1■□□□□ 0.33
MUC1-220ENST00000498431 HCN2Q9UL51 889 aa17.1■□□□□ 0.33
MUC1-220ENST00000498431 LOC400499M0QZD8 3231 aa17.1■□□□□ 0.33
MUC1-220ENST00000498431 TMEM8BA6NDV4 472 aa17.09■□□□□ 0.33
MUC1-220ENST00000498431 KIAA0391O15091 583 aaKnown RBP17.09■□□□□ 0.33
MUC1-220ENST00000498431 COCHO43405 550 aa17.09■□□□□ 0.33
MUC1-220ENST00000498431 TNFRSF4P43489 277 aa17.09■□□□□ 0.33
MUC1-220ENST00000498431 SURF1Q15526 300 aa17.09■□□□□ 0.33
MUC1-220ENST00000498431 PEAR1Q5VY43 1037 aaPredicted RBP17.09■□□□□ 0.33
MUC1-220ENST00000498431 CCDC73Q6ZRK6 1079 aa17.09■□□□□ 0.33
MUC1-220ENST00000498431 ETFBKMTQ8IXQ9 262 aa17.09■□□□□ 0.33
MUC1-220ENST00000498431 PGBD3Q8N328 593 aa17.09■□□□□ 0.33
MUC1-220ENST00000498431 RDH13Q8NBN7 331 aa17.09■□□□□ 0.33
MUC1-220ENST00000498431 ZCCHC14Q8WYQ9 949 aaKnown RBP17.09■□□□□ 0.33
MUC1-220ENST00000498431 SLITRK1Q96PX8 696 aa17.09■□□□□ 0.33
MUC1-220ENST00000498431 EHD2Q9NZN4 543 aa17.09■□□□□ 0.33
MUC1-220ENST00000498431 PCDH15Q96QU1 1955 aa17.09■□□□□ 0.33
MUC1-220ENST00000498431 TRIM24O15164 1050 aa17.08■□□□□ 0.32
MUC1-220ENST00000498431 TACC1O75410 805 aa17.08■□□□□ 0.32
MUC1-220ENST00000498431 CFIP05156 583 aa17.08■□□□□ 0.32
MUC1-220ENST00000498431 DLATP10515 647 aaKnown RBP17.08■□□□□ 0.32
MUC1-220ENST00000498431 FAM193AP78312 1265 aa17.08■□□□□ 0.32
MUC1-220ENST00000498431 SIM1P81133 766 aaPredicted RBP17.08■□□□□ 0.32
MUC1-220ENST00000498431 SEMA3BQ13214 749 aa17.08■□□□□ 0.32
MUC1-220ENST00000498431 MIB1Q86YT6 1006 aa17.08■□□□□ 0.32
MUC1-220ENST00000498431 PDILTQ8N807 584 aa17.08■□□□□ 0.32
MUC1-220ENST00000498431 OR2I1PQ8NGU4 316 aa17.08■□□□□ 0.32
MUC1-220ENST00000498431 FBXO32Q969P5 355 aa17.08■□□□□ 0.32
MUC1-220ENST00000498431 ERLEC1Q96DZ1 483 aa17.08■□□□□ 0.32
MUC1-220ENST00000498431 KCNK16Q96T55 309 aa17.08■□□□□ 0.32
MUC1-220ENST00000498431 ELOVL4Q9GZR5 314 aa17.08■□□□□ 0.32
MUC1-220ENST00000498431 SLC32A1Q9H598 525 aa17.08■□□□□ 0.32
MUC1-220ENST00000498431 CHORDC1Q9UHD1 332 aaPredicted RBP17.08■□□□□ 0.32
MUC1-220ENST00000498431 NEUROG3Q9Y4Z2 214 aa17.08■□□□□ 0.32
MUC1-220ENST00000498431 E2F8A0AVK6 867 aa17.07■□□□□ 0.32
MUC1-220ENST00000498431 TBC1D3BA6NDS4 549 aa17.07■□□□□ 0.32
MUC1-220ENST00000498431 GABRG2P18507 467 aa17.07■□□□□ 0.32
MUC1-220ENST00000498431 YWHAQP27348 245 aa17.07■□□□□ 0.32
MUC1-220ENST00000498431 WASP42768 502 aa17.07■□□□□ 0.32
MUC1-220ENST00000498431 RPL6Q02878 288 aaKnown RBP17.07■□□□□ 0.32
MUC1-220ENST00000498431 SNRNP35Q16560 246 aaKnown RBP17.07■□□□□ 0.32
MUC1-220ENST00000498431 WDR72Q3MJ13 1102 aa17.07■□□□□ 0.32
MUC1-220ENST00000498431 SPDYCQ5MJ68 293 aa17.07■□□□□ 0.32
MUC1-220ENST00000498431 DDX42Q86XP3 938 aaKnown RBP eCLIP17.07■□□□□ 0.32
MUC1-220ENST00000498431 BBS7Q8IWZ6 715 aa17.07■□□□□ 0.32
MUC1-220ENST00000498431 CCDC65Q8IXS2 484 aa17.07■□□□□ 0.32
MUC1-220ENST00000498431 NUP93Q8N1F7 819 aa17.07■□□□□ 0.32
MUC1-220ENST00000498431 ZNF513Q8N8E2 541 aaPredicted RBP17.07■□□□□ 0.32
MUC1-220ENST00000498431 SCAMP5Q8TAC9 235 aa17.07■□□□□ 0.32
MUC1-220ENST00000498431 GTPBP2Q9BX10 602 aaKnown RBP17.07■□□□□ 0.32
MUC1-220ENST00000498431 BACH2Q9BYV9 841 aa17.07■□□□□ 0.32
MUC1-220ENST00000498431 GZF1Q9H116 711 aaPredicted RBP17.07■□□□□ 0.32
MUC1-220ENST00000498431 CCSER2Q9H7U1 834 aa17.07■□□□□ 0.32
MUC1-220ENST00000498431 CALCOCO1Q9P1Z2 691 aa17.07■□□□□ 0.32
MUC1-220ENST00000498431 TBC1D14Q9P2M4 693 aa17.07■□□□□ 0.32
MUC1-220ENST00000498431 ANKRD11Q6UB99 2663 aaPredicted RBP17.06■□□□□ 0.32
MUC1-220ENST00000498431 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.06■□□□□ 0.32
MUC1-220ENST00000498431 TGFB1I1O43294 461 aa17.06■□□□□ 0.32
MUC1-220ENST00000498431 TULP3O75386 442 aa17.06■□□□□ 0.32
MUC1-220ENST00000498431 TNNI1P19237 187 aa17.06■□□□□ 0.32
MUC1-220ENST00000498431 PGFP49763 221 aa17.06■□□□□ 0.32
MUC1-220ENST00000498431 TNNC1P63316 161 aa17.06■□□□□ 0.32
MUC1-220ENST00000498431 GAD2Q05329 585 aa17.06■□□□□ 0.32
MUC1-220ENST00000498431 TMEM25Q86YD3 366 aa17.06■□□□□ 0.32
MUC1-220ENST00000498431 B3GALNT2Q8NCR0 500 aa17.06■□□□□ 0.32
MUC1-220ENST00000498431 ZNF516Q92618 1163 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms