RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 KAZNQ674X7 775 aa8.46□□□□□ -1.06
PDZRN3-212ENST00000498048 TXNRD3NBQ6F5E7 133 aa8.46□□□□□ -1.06
PDZRN3-212ENST00000498048 TTC27Q6P3X3 843 aa8.46□□□□□ -1.06
PDZRN3-212ENST00000498048 FBXO46Q6PJ61 603 aaPredicted RBP8.46□□□□□ -1.06
PDZRN3-212ENST00000498048 MFSD7Q6UXD7 560 aa8.46□□□□□ -1.06
PDZRN3-212ENST00000498048 SND1Q7KZF4 910 aaKnown RBP eCLIP8.46□□□□□ -1.06
PDZRN3-212ENST00000498048 CTU1Q7Z7A3 348 aaKnown RBP8.46□□□□□ -1.06
PDZRN3-212ENST00000498048 TMEM110Q86TL2 294 aa8.46□□□□□ -1.06
PDZRN3-212ENST00000498048 RTN4RL1Q86UN2 441 aaPredicted RBP8.46□□□□□ -1.06
PDZRN3-212ENST00000498048 PIGZQ86VD9 579 aa8.46□□□□□ -1.06
PDZRN3-212ENST00000498048 NPAS4Q8IUM7 802 aa8.46□□□□□ -1.06
PDZRN3-212ENST00000498048 RCOR2Q8IZ40 523 aa8.46□□□□□ -1.06
PDZRN3-212ENST00000498048 KRT222Q8N1A0 295 aa8.46□□□□□ -1.06
PDZRN3-212ENST00000498048 DBF4BQ8NFT6 615 aa8.46□□□□□ -1.06
PDZRN3-212ENST00000498048 FAM172AQ8WUF8 416 aa8.46□□□□□ -1.06
PDZRN3-212ENST00000498048 C1orf54Q8WWF1 131 aa8.46□□□□□ -1.06
PDZRN3-212ENST00000498048 IFT81Q8WYA0 676 aa8.46□□□□□ -1.06
PDZRN3-212ENST00000498048 ATG4AQ8WYN0 398 aa8.46□□□□□ -1.06
PDZRN3-212ENST00000498048 HSPH1Q92598 858 aa8.46□□□□□ -1.06
PDZRN3-212ENST00000498048 CAVIN3Q969G5 261 aa8.46□□□□□ -1.06
PDZRN3-212ENST00000498048 FAM149B1Q96BN6 582 aa8.46□□□□□ -1.06
PDZRN3-212ENST00000498048 PCED1BQ96HM7 432 aa8.46□□□□□ -1.06
PDZRN3-212ENST00000498048 SCLYQ96I15 445 aa8.46□□□□□ -1.06
PDZRN3-212ENST00000498048 ZNF333Q96JL9 665 aa8.46□□□□□ -1.06
PDZRN3-212ENST00000498048 CFAP57Q96MR6 1250 aa8.46□□□□□ -1.06
PDZRN3-212ENST00000498048 PEBP4Q96S96 227 aa8.46□□□□□ -1.06
PDZRN3-212ENST00000498048 HINFPQ9BQA5 517 aa8.46□□□□□ -1.06
PDZRN3-212ENST00000498048 HEMGNQ9BXL5 484 aa8.46□□□□□ -1.06
PDZRN3-212ENST00000498048 FUT8Q9BYC5 575 aa8.46□□□□□ -1.06
PDZRN3-212ENST00000498048 MRPL9Q9BYD2 267 aaKnown RBP8.46□□□□□ -1.06
PDZRN3-212ENST00000498048 B3GNT5Q9BYG0 378 aa8.46□□□□□ -1.06
PDZRN3-212ENST00000498048 TRIM31Q9BZY9 425 aa8.46□□□□□ -1.06
PDZRN3-212ENST00000498048 DCLK3Q9C098 648 aa8.46□□□□□ -1.06
PDZRN3-212ENST00000498048 FAM114A2Q9NRY5 505 aa8.46□□□□□ -1.06
PDZRN3-212ENST00000498048 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.46□□□□□ -1.06
PDZRN3-212ENST00000498048 KANSL3Q9P2N6 904 aa8.46□□□□□ -1.06
PDZRN3-212ENST00000498048 PCSK1NQ9UHG2 260 aa8.46□□□□□ -1.06
PDZRN3-212ENST00000498048 PCYOX1Q9UHG3 505 aa8.46□□□□□ -1.06
PDZRN3-212ENST00000498048 NFU1Q9UMS0 254 aa8.46□□□□□ -1.06
PDZRN3-212ENST00000498048 USP18Q9UMW8 372 aa8.46□□□□□ -1.06
PDZRN3-212ENST00000498048 PCDHB7Q9Y5E2 793 aa8.46□□□□□ -1.06
PDZRN3-212ENST00000498048 PCDHGA4Q9Y5G9 962 aa8.46□□□□□ -1.06
PDZRN3-212ENST00000498048 ANKRD36A6QL64 1941 aa8.46□□□□□ -1.06
PDZRN3-212ENST00000498048 BRCA2P51587 3418 aa8.45□□□□□ -1.06
PDZRN3-212ENST00000498048 CHD5Q8TDI0 1954 aa8.45□□□□□ -1.06
PDZRN3-212ENST00000498048 MYBPHLA2RUH7 354 aa8.45□□□□□ -1.06
PDZRN3-212ENST00000498048 BHMG1C9JSJ3 638 aaPredicted RBP8.45□□□□□ -1.06
PDZRN3-212ENST00000498048 DAPK3O43293 454 aa8.45□□□□□ -1.06
PDZRN3-212ENST00000498048 RRP9O43818 475 aaKnown RBP8.45□□□□□ -1.06
PDZRN3-212ENST00000498048 DDHD2O94830 711 aa8.45□□□□□ -1.06
PDZRN3-212ENST00000498048 FBXO21O94952 628 aa8.45□□□□□ -1.06
PDZRN3-212ENST00000498048 TJP3O95049 919 aa8.45□□□□□ -1.06
PDZRN3-212ENST00000498048 TRUB2O95900 331 aaKnown RBP8.45□□□□□ -1.06
PDZRN3-212ENST00000498048 IL1R2P27930 398 aa8.45□□□□□ -1.06
PDZRN3-212ENST00000498048 GBP1P32455 592 aa8.45□□□□□ -1.06
PDZRN3-212ENST00000498048 MLLT3P42568 568 aaPredicted RBP8.45□□□□□ -1.06
PDZRN3-212ENST00000498048 CDKN2BP42772 138 aa8.45□□□□□ -1.06
PDZRN3-212ENST00000498048 PTPN9P43378 593 aa8.45□□□□□ -1.06
PDZRN3-212ENST00000498048 RPL34P49207 117 aaKnown RBP8.45□□□□□ -1.06
PDZRN3-212ENST00000498048 SULT1E1P49888 294 aa8.45□□□□□ -1.06
PDZRN3-212ENST00000498048 GATMP50440 423 aa8.45□□□□□ -1.06
PDZRN3-212ENST00000498048 CCL23P55773 120 aa8.45□□□□□ -1.06
PDZRN3-212ENST00000498048 MAP3K7CLP57077 242 aa8.45□□□□□ -1.06
PDZRN3-212ENST00000498048 YWHAHQ04917 246 aaPredicted RBP8.45□□□□□ -1.06
PDZRN3-212ENST00000498048 GPS2Q13227 327 aa8.45□□□□□ -1.06
PDZRN3-212ENST00000498048 SNX1Q13596 522 aa8.45□□□□□ -1.06
PDZRN3-212ENST00000498048 KRT81Q14533 505 aa8.45□□□□□ -1.06
PDZRN3-212ENST00000498048 MAPRE1Q15691 268 aaKnown RBP8.45□□□□□ -1.06
PDZRN3-212ENST00000498048 ATP13A4Q4VNC1 1196 aa8.45□□□□□ -1.06
PDZRN3-212ENST00000498048 EFHC1Q5JVL4 640 aa8.45□□□□□ -1.06
PDZRN3-212ENST00000498048 DCLRE1AQ6PJP8 1040 aa8.45□□□□□ -1.06
PDZRN3-212ENST00000498048 CD300LGQ6UXG3 332 aa8.45□□□□□ -1.06
PDZRN3-212ENST00000498048 SLC39A5Q6ZMH5 540 aa8.45□□□□□ -1.06
PDZRN3-212ENST00000498048 CCNI2Q6ZMN8 369 aaPredicted RBP8.45□□□□□ -1.06
PDZRN3-212ENST00000498048 FAM43BQ6ZT52 329 aaPredicted RBP8.45□□□□□ -1.06
PDZRN3-212ENST00000498048 ANKRD33Q7Z3H0 272 aa8.45□□□□□ -1.06
PDZRN3-212ENST00000498048 ZNF280BQ86YH2 543 aa8.45□□□□□ -1.06
PDZRN3-212ENST00000498048 RFX6Q8HWS3 928 aa8.45□□□□□ -1.06
PDZRN3-212ENST00000498048 COLGALT2Q8IYK4 626 aa8.45□□□□□ -1.06
PDZRN3-212ENST00000498048 ZDHHC14Q8IZN3 488 aa8.45□□□□□ -1.06
PDZRN3-212ENST00000498048 THEM5Q8N1Q8 247 aa8.45□□□□□ -1.06
PDZRN3-212ENST00000498048 LRRC43Q8N309 656 aa8.45□□□□□ -1.06
PDZRN3-212ENST00000498048 OR10T2Q8NGX3 314 aa8.45□□□□□ -1.06
PDZRN3-212ENST00000498048 MYCBPAPQ8TBZ2 947 aa8.45□□□□□ -1.06
PDZRN3-212ENST00000498048 DIS3LQ8TF46 1054 aaKnown RBP8.45□□□□□ -1.06
PDZRN3-212ENST00000498048 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.45□□□□□ -1.063e-8■■■■□ 22.1
PDZRN3-212ENST00000498048 KCTD13Q8WZ19 329 aa8.45□□□□□ -1.06
PDZRN3-212ENST00000498048 HAUS1Q96CS2 278 aa8.45□□□□□ -1.06
PDZRN3-212ENST00000498048 GDAP1L1Q96MZ0 367 aa8.45□□□□□ -1.06
PDZRN3-212ENST00000498048 RUFY1Q96T51 708 aa8.45□□□□□ -1.06
PDZRN3-212ENST00000498048 NCAPGQ9BPX3 1015 aa8.45□□□□□ -1.06
PDZRN3-212ENST00000498048 RTP3Q9BQQ7 232 aa8.45□□□□□ -1.06
PDZRN3-212ENST00000498048 ACBD6Q9BR61 282 aa8.45□□□□□ -1.06
PDZRN3-212ENST00000498048 SNRNP25Q9BV90 132 aaKnown RBP8.45□□□□□ -1.06
PDZRN3-212ENST00000498048 RHOBTB2Q9BYZ6 727 aa8.45□□□□□ -1.06
PDZRN3-212ENST00000498048 LRRC19Q9H756 370 aa8.45□□□□□ -1.06
PDZRN3-212ENST00000498048 DMAP1Q9NPF5 467 aaPredicted RBP8.45□□□□□ -1.06
PDZRN3-212ENST00000498048 CHST7Q9NS84 486 aa8.45□□□□□ -1.06
PDZRN3-212ENST00000498048 HOMER3Q9NSC5 361 aa8.45□□□□□ -1.06
PDZRN3-212ENST00000498048 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms