RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 EEF1DP29692 281 aaKnown RBP6.59□□□□□ -1.35
BRCA1-224ENST00000497488 THPOP40225 353 aa6.59□□□□□ -1.35
BRCA1-224ENST00000497488 ALDH3A2P51648 485 aa6.59□□□□□ -1.35
BRCA1-224ENST00000497488 HSD17B7P56937 341 aa6.59□□□□□ -1.35
BRCA1-224ENST00000497488 ATP1A4Q13733 1029 aa6.59□□□□□ -1.35
BRCA1-224ENST00000497488 ZNF484Q5JVG2 852 aa6.59□□□□□ -1.35
BRCA1-224ENST00000497488 PLEKHS1Q5SXH7 462 aa6.59□□□□□ -1.35
BRCA1-224ENST00000497488 BICRALQ6AI39 1079 aa6.59□□□□□ -1.35
BRCA1-224ENST00000497488 DGAT2L7PQ6IED9 249 aa6.59□□□□□ -1.35
BRCA1-224ENST00000497488 GALNT18Q6P9A2 607 aa6.59□□□□□ -1.35
BRCA1-224ENST00000497488 C11orf88Q6PI97 169 aa6.59□□□□□ -1.35
BRCA1-224ENST00000497488 CEP128Q6ZU80 1094 aa6.59□□□□□ -1.35
BRCA1-224ENST00000497488 RPAINQ86UA6 219 aa6.59□□□□□ -1.35
BRCA1-224ENST00000497488 PROSER1Q86XN7 944 aa6.59□□□□□ -1.35
BRCA1-224ENST00000497488 RAB11FIP4Q86YS3 637 aa6.59□□□□□ -1.35
BRCA1-224ENST00000497488 RHOT2Q8IXI1 618 aa6.59□□□□□ -1.35
BRCA1-224ENST00000497488 WDTC1Q8N5D0 677 aa6.59□□□□□ -1.35
BRCA1-224ENST00000497488 LILRA3Q8N6C8 439 aaPredicted RBP6.59□□□□□ -1.35
BRCA1-224ENST00000497488 FBXO18Q8NFZ0 1043 aa6.59□□□□□ -1.35
BRCA1-224ENST00000497488 MOSPD2Q8NHP6 518 aa6.59□□□□□ -1.35
BRCA1-224ENST00000497488 SH3RF3Q8TEJ3 882 aaPredicted RBP6.59□□□□□ -1.35
BRCA1-224ENST00000497488 PIGOQ8TEQ8 1089 aa6.59□□□□□ -1.35
BRCA1-224ENST00000497488 SCFD2Q8WU76 684 aa6.59□□□□□ -1.35
BRCA1-224ENST00000497488 WDR60Q8WVS4 1066 aa6.59□□□□□ -1.35
BRCA1-224ENST00000497488 PIGSQ96S52 555 aa6.59□□□□□ -1.35
BRCA1-224ENST00000497488 CYP4F11Q9HBI6 524 aa6.59□□□□□ -1.35
BRCA1-224ENST00000497488 XPNPEP3Q9NQH7 507 aa6.59□□□□□ -1.35
BRCA1-224ENST00000497488 GPRC5DQ9NZD1 345 aa6.59□□□□□ -1.35
BRCA1-224ENST00000497488 C5AR2Q9P296 337 aa6.59□□□□□ -1.35
BRCA1-224ENST00000497488 XPO7Q9UIA9 1087 aaKnown RBP6.59□□□□□ -1.35
BRCA1-224ENST00000497488 PLAGL2Q9UPG8 496 aa6.59□□□□□ -1.35
BRCA1-224ENST00000497488 FAM170BA6NMN3 283 aa6.58□□□□□ -1.36
BRCA1-224ENST00000497488 A8MXE2 369 aa6.58□□□□□ -1.36
BRCA1-224ENST00000497488 WNT10BO00744 389 aa6.58□□□□□ -1.36
BRCA1-224ENST00000497488 DHHO43323 396 aa6.58□□□□□ -1.36
BRCA1-224ENST00000497488 SLC4A1P02730 911 aa6.58□□□□□ -1.36
BRCA1-224ENST00000497488 CYP21A2P08686 494 aa6.58□□□□□ -1.36
BRCA1-224ENST00000497488 P4HA1P13674 534 aa6.58□□□□□ -1.36
BRCA1-224ENST00000497488 PRKCAP17252 672 aa6.58□□□□□ -1.36
BRCA1-224ENST00000497488 NOS3P29474 1203 aa6.58□□□□□ -1.36
BRCA1-224ENST00000497488 GCH1P30793 250 aa6.58□□□□□ -1.36
BRCA1-224ENST00000497488 GARSP41250 739 aaKnown RBP6.58□□□□□ -1.36
BRCA1-224ENST00000497488 MAGEA10P43363 369 aaPredicted RBP6.58□□□□□ -1.36
BRCA1-224ENST00000497488 GSK3AP49840 483 aa6.58□□□□□ -1.36
BRCA1-224ENST00000497488 PSMC6P62333 389 aa6.58□□□□□ -1.36
BRCA1-224ENST00000497488 IL13RA1P78552 427 aa6.58□□□□□ -1.36
BRCA1-224ENST00000497488 CD83Q01151 205 aa6.58□□□□□ -1.36
BRCA1-224ENST00000497488 PDCLQ13371 301 aa6.58□□□□□ -1.36
BRCA1-224ENST00000497488 KCNAB1Q14722 419 aa6.58□□□□□ -1.36
BRCA1-224ENST00000497488 KIR3DS1Q14943 382 aa6.58□□□□□ -1.36
BRCA1-224ENST00000497488 C5orf22Q49AR2 442 aa6.58□□□□□ -1.36
BRCA1-224ENST00000497488 TCP11X2Q5H9J9 407 aa6.58□□□□□ -1.36
BRCA1-224ENST00000497488 CC2D1BQ5T0F9 858 aaKnown RBP6.58□□□□□ -1.36
BRCA1-224ENST00000497488 GARNL3Q5VVW2 1013 aa6.58□□□□□ -1.36
BRCA1-224ENST00000497488 LIPMQ5VYY2 423 aa6.58□□□□□ -1.36
BRCA1-224ENST00000497488 TMC5Q6UXY8 1006 aa6.58□□□□□ -1.36
BRCA1-224ENST00000497488 UNC5DQ6UXZ4 953 aa6.58□□□□□ -1.36
BRCA1-224ENST00000497488 BTN2A1Q7KYR7 527 aa6.58□□□□□ -1.36
BRCA1-224ENST00000497488 VSIG10LQ86VR7 867 aa6.58□□□□□ -1.36
BRCA1-224ENST00000497488 ZNF619Q8N2I2 560 aa6.58□□□□□ -1.36
BRCA1-224ENST00000497488 REPS2Q8NFH8 660 aa6.58□□□□□ -1.36
BRCA1-224ENST00000497488 SMCR8Q8TEV9 937 aaPredicted RBP6.58□□□□□ -1.36
BRCA1-224ENST00000497488 SYTL4Q96C24 671 aaPredicted RBP6.58□□□□□ -1.36
BRCA1-224ENST00000497488 GRAMD1AQ96CP6 724 aa6.58□□□□□ -1.36
BRCA1-224ENST00000497488 WDR92Q96MX6 357 aa6.58□□□□□ -1.36
BRCA1-224ENST00000497488 VEZTQ9HBM0 779 aa6.58□□□□□ -1.36
BRCA1-224ENST00000497488 RXFP1Q9HBX9 757 aa6.58□□□□□ -1.36
BRCA1-224ENST00000497488 XPR1Q9UBH6 696 aa6.58□□□□□ -1.36
BRCA1-224ENST00000497488 TBK1Q9UHD2 729 aa6.58□□□□□ -1.36
BRCA1-224ENST00000497488 USP21Q9UK80 565 aa6.58□□□□□ -1.36
BRCA1-224ENST00000497488 NUDT5Q9UKK9 219 aa6.58□□□□□ -1.36
BRCA1-224ENST00000497488 CORO1CQ9ULV4 474 aaPredicted RBP6.58□□□□□ -1.36
BRCA1-224ENST00000497488 CUL7Q14999 1698 aa6.58□□□□□ -1.36
BRCA1-224ENST00000497488 SHROOM2Q13796 1616 aa6.58□□□□□ -1.36
BRCA1-224ENST00000497488 A0A1W2PQ09 198 aa6.57□□□□□ -1.36
BRCA1-224ENST00000497488 AQP7P3A6NL99 342 aa6.57□□□□□ -1.36
BRCA1-224ENST00000497488 PEX12O00623 359 aa6.57□□□□□ -1.36
BRCA1-224ENST00000497488 TEX33O43247 280 aa6.57□□□□□ -1.36
BRCA1-224ENST00000497488 SLC43A1O75387 559 aa6.57□□□□□ -1.36
BRCA1-224ENST00000497488 GASTP01350 101 aa6.57□□□□□ -1.36
BRCA1-224ENST00000497488 ARP10275 920 aa6.57□□□□□ -1.36
BRCA1-224ENST00000497488 ALADP13716 330 aa6.57□□□□□ -1.36
BRCA1-224ENST00000497488 IL2RBP14784 551 aa6.57□□□□□ -1.36
BRCA1-224ENST00000497488 FGFR4P22455 802 aa6.57□□□□□ -1.36
BRCA1-224ENST00000497488 NFKBIAP25963 317 aa6.57□□□□□ -1.36
BRCA1-224ENST00000497488 BSGP35613 385 aa6.57□□□□□ -1.36
BRCA1-224ENST00000497488 PTDSS1P48651 473 aaKnown RBP6.57□□□□□ -1.36
BRCA1-224ENST00000497488 WNT3P56703 355 aa6.57□□□□□ -1.36
BRCA1-224ENST00000497488 MRPS35P82673 323 aaKnown RBP6.57□□□□□ -1.36
BRCA1-224ENST00000497488 CYP27A1Q02318 531 aa6.57□□□□□ -1.36
BRCA1-224ENST00000497488 E2F5Q15329 346 aa6.57□□□□□ -1.36
BRCA1-224ENST00000497488 ZNF674Q2M3X9 581 aa6.57□□□□□ -1.36
BRCA1-224ENST00000497488 SETMARQ53H47 684 aaPredicted RBP6.57□□□□□ -1.36
BRCA1-224ENST00000497488 TEPPQ6URK8 271 aa6.57□□□□□ -1.36
BRCA1-224ENST00000497488 MCM10Q7L590 875 aa6.57□□□□□ -1.36
BRCA1-224ENST00000497488 CCDC105Q8IYK2 499 aa6.57□□□□□ -1.36
BRCA1-224ENST00000497488 SHISA5Q8N114 240 aa6.57□□□□□ -1.36
BRCA1-224ENST00000497488 BCL6BQ8N143 479 aaPredicted RBP6.57□□□□□ -1.36
BRCA1-224ENST00000497488 AOPEPQ8N6M6 819 aa6.57□□□□□ -1.36
BRCA1-224ENST00000497488 SPC24Q8NBT2 197 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms