RNA–Protein interactions for RNA: ENST00000497080.1

RAB3GAP1-206, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 5

Gene RAB3GAP1, Length 446 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-206ENST00000497080 COPB1P53618 953 aaKnown RBP5.34□□□□□ -1.55
RAB3GAP1-206ENST00000497080 SUMO2P61956 95 aaKnown RBP5.34□□□□□ -1.55
RAB3GAP1-206ENST00000497080 PPP2R5AQ15172 486 aa5.34□□□□□ -1.55
RAB3GAP1-206ENST00000497080 CNGA2Q16280 664 aa5.34□□□□□ -1.55
RAB3GAP1-206ENST00000497080 RAB11FIP4Q86YS3 637 aa5.34□□□□□ -1.55
RAB3GAP1-206ENST00000497080 SFTPA1Q8IWL2 248 aa5.34□□□□□ -1.55
RAB3GAP1-206ENST00000497080 TRIM43Q96BQ3 446 aaPredicted RBP5.34□□□□□ -1.55
RAB3GAP1-206ENST00000497080 CCDC17Q96LX7 622 aa5.34□□□□□ -1.55
RAB3GAP1-206ENST00000497080 WDR26Q9H7D7 661 aa5.34□□□□□ -1.55
RAB3GAP1-206ENST00000497080 EID1Q9Y6B2 187 aa5.34□□□□□ -1.55
RAB3GAP1-206ENST00000497080 ISM1B1AKI9 464 aa5.33□□□□□ -1.56
RAB3GAP1-206ENST00000497080 PPEF2O14830 753 aa5.33□□□□□ -1.56
RAB3GAP1-206ENST00000497080 GCATO75600 419 aa5.33□□□□□ -1.56
RAB3GAP1-206ENST00000497080 USP1O94782 785 aa5.33□□□□□ -1.56
RAB3GAP1-206ENST00000497080 EPHA3P29320 983 aa5.33□□□□□ -1.56
RAB3GAP1-206ENST00000497080 PTDSS1P48651 473 aaKnown RBP5.33□□□□□ -1.56
RAB3GAP1-206ENST00000497080 FMO1Q01740 532 aa5.33□□□□□ -1.56
RAB3GAP1-206ENST00000497080 NPY5RQ15761 445 aa5.33□□□□□ -1.56
RAB3GAP1-206ENST00000497080 PTCHD4Q6ZW05 846 aa5.33□□□□□ -1.56
RAB3GAP1-206ENST00000497080 ZBTB9Q96C00 473 aa5.33□□□□□ -1.56
RAB3GAP1-206ENST00000497080 CTHRC1Q96CG8 243 aa5.33□□□□□ -1.56
RAB3GAP1-206ENST00000497080 NMD3Q96D46 503 aaKnown RBP5.33□□□□□ -1.56
RAB3GAP1-206ENST00000497080 ZNF48Q96MX3 618 aaPredicted RBP5.33□□□□□ -1.56
RAB3GAP1-206ENST00000497080 FYTTD1Q96QD9 318 aaKnown RBP5.33□□□□□ -1.56
RAB3GAP1-206ENST00000497080 EFHD1Q9BUP0 239 aa5.33□□□□□ -1.56
RAB3GAP1-206ENST00000497080 FAM204AQ9H8W3 233 aa5.33□□□□□ -1.56
RAB3GAP1-206ENST00000497080 ELOVL5Q9NYP7 299 aa5.33□□□□□ -1.56
RAB3GAP1-206ENST00000497080 DDX20Q9UHI6 824 aaKnown RBP5.33□□□□□ -1.56
RAB3GAP1-206ENST00000497080 HDAC9Q9UKV0 1011 aa5.33□□□□□ -1.56
RAB3GAP1-206ENST00000497080 SCAF8Q9UPN6 1271 aaKnown RBP5.33□□□□□ -1.56
RAB3GAP1-206ENST00000497080 PAXBP1Q9Y5B6 917 aa5.33□□□□□ -1.56
RAB3GAP1-206ENST00000497080 MBD3L4A6NDZ8 208 aaPredicted RBP5.32□□□□□ -1.56
RAB3GAP1-206ENST00000497080 MBD3L3A6NE82 208 aaPredicted RBP5.32□□□□□ -1.56
RAB3GAP1-206ENST00000497080 FCHO1O14526 889 aa5.32□□□□□ -1.56
RAB3GAP1-206ENST00000497080 CD3EAPO15446 510 aaKnown RBP5.32□□□□□ -1.56
RAB3GAP1-206ENST00000497080 RRP9O43818 475 aaKnown RBP5.32□□□□□ -1.56
RAB3GAP1-206ENST00000497080 BCAR3O75815 825 aa5.32□□□□□ -1.56
RAB3GAP1-206ENST00000497080 MT-CO3P00414 261 aa5.32□□□□□ -1.56
RAB3GAP1-206ENST00000497080 S100BP04271 92 aaPredicted RBP5.32□□□□□ -1.56
RAB3GAP1-206ENST00000497080 HGFP14210 728 aa5.32□□□□□ -1.56
RAB3GAP1-206ENST00000497080 CREB1P16220 341 aa5.32□□□□□ -1.56
RAB3GAP1-206ENST00000497080 IL1R2P27930 398 aa5.32□□□□□ -1.56
RAB3GAP1-206ENST00000497080 DIO1P49895 249 aa5.32□□□□□ -1.56
RAB3GAP1-206ENST00000497080 TIRAPP58753 221 aa5.32□□□□□ -1.56
RAB3GAP1-206ENST00000497080 LMAN2Q12907 356 aa5.32□□□□□ -1.56
RAB3GAP1-206ENST00000497080 RABEP1Q15276 862 aa5.32□□□□□ -1.56
RAB3GAP1-206ENST00000497080 TRIP6Q15654 476 aaKnown RBP5.32□□□□□ -1.56
RAB3GAP1-206ENST00000497080 RNF220Q5VTB9 566 aa5.32□□□□□ -1.56
RAB3GAP1-206ENST00000497080 TCEAL8Q8IYN2 117 aa5.32□□□□□ -1.56
RAB3GAP1-206ENST00000497080 MAGEB6Q8N7X4 407 aa5.32□□□□□ -1.56
RAB3GAP1-206ENST00000497080 PRSS3P2Q8NHM4 247 aa5.32□□□□□ -1.56
RAB3GAP1-206ENST00000497080 VN1R3Q9BXE9 311 aa5.32□□□□□ -1.56
RAB3GAP1-206ENST00000497080 VPS16Q9H269 839 aa5.32□□□□□ -1.56
RAB3GAP1-206ENST00000497080 TUBA8Q9NY65 449 aaPredicted RBP5.32□□□□□ -1.56
RAB3GAP1-206ENST00000497080 MGAT4CQ9UBM8 478 aa5.32□□□□□ -1.56
RAB3GAP1-206ENST00000497080 AFF4Q9UHB7 1163 aaKnown RBP5.32□□□□□ -1.56
RAB3GAP1-206ENST00000497080 LOC105371045A0A1W2PR82 267 aa5.31□□□□□ -1.56
RAB3GAP1-206ENST00000497080 TMEM232C9JQI7 657 aa5.31□□□□□ -1.56
RAB3GAP1-206ENST00000497080 RAB27BO00194 218 aa5.31□□□□□ -1.56
RAB3GAP1-206ENST00000497080 CCP110O43303 1012 aa5.31□□□□□ -1.56
RAB3GAP1-206ENST00000497080 FRS3O43559 492 aa5.31□□□□□ -1.56
RAB3GAP1-206ENST00000497080 SPRY2O43597 315 aa5.31□□□□□ -1.56
RAB3GAP1-206ENST00000497080 MAP4K4O95819 1239 aaPredicted RBP5.31□□□□□ -1.56
RAB3GAP1-206ENST00000497080 BMP15O95972 392 aa5.31□□□□□ -1.56
RAB3GAP1-206ENST00000497080 IGKV2-30P06310 120 aa5.31□□□□□ -1.56
RAB3GAP1-206ENST00000497080 ATP5F1P24539 256 aaPredicted RBP5.31□□□□□ -1.56
RAB3GAP1-206ENST00000497080 KLRC1P26715 233 aa5.31□□□□□ -1.56
RAB3GAP1-206ENST00000497080 MTHFSP49914 203 aa5.31□□□□□ -1.56
RAB3GAP1-206ENST00000497080 GATMP50440 423 aa5.31□□□□□ -1.56
RAB3GAP1-206ENST00000497080 RPS16P62249 146 aaKnown RBP5.31□□□□□ -1.56
RAB3GAP1-206ENST00000497080 ARHGEF7Q14155 803 aa5.31□□□□□ -1.56
RAB3GAP1-206ENST00000497080 SLC29A2Q14542 456 aa5.31□□□□□ -1.56
RAB3GAP1-206ENST00000497080 ZNF750Q32MQ0 723 aa5.31□□□□□ -1.56
RAB3GAP1-206ENST00000497080 Q4G0T1 1027 aa5.31□□□□□ -1.56
RAB3GAP1-206ENST00000497080 AWAT1Q58HT5 328 aa5.31□□□□□ -1.56
RAB3GAP1-206ENST00000497080 NXNQ6DKJ4 435 aa5.31□□□□□ -1.56
RAB3GAP1-206ENST00000497080 ZNF813Q6ZN06 617 aa5.31□□□□□ -1.56
RAB3GAP1-206ENST00000497080 COL20A1Q9P218 1284 aa5.31□□□□□ -1.56
RAB3GAP1-206ENST00000497080 OGDHLQ9ULD0 1010 aa5.31□□□□□ -1.56
RAB3GAP1-206ENST00000497080 BTBD19C9JJ37 291 aa5.3□□□□□ -1.56
RAB3GAP1-206ENST00000497080 PIAS2O75928 621 aa5.3□□□□□ -1.56
RAB3GAP1-206ENST00000497080 A1BGP04217 495 aa5.3□□□□□ -1.56
RAB3GAP1-206ENST00000497080 APEHP13798 732 aaKnown RBP5.3□□□□□ -1.56
RAB3GAP1-206ENST00000497080 PGDP52209 483 aa5.3□□□□□ -1.56
RAB3GAP1-206ENST00000497080 CACNB3P54284 484 aa5.3□□□□□ -1.56
RAB3GAP1-206ENST00000497080 STK3Q13188 491 aa5.3□□□□□ -1.56
RAB3GAP1-206ENST00000497080 ZNF268Q14587 947 aaPredicted RBP5.3□□□□□ -1.56
RAB3GAP1-206ENST00000497080 KIAA0753Q2KHM9 967 aa5.3□□□□□ -1.56
RAB3GAP1-206ENST00000497080 PXDC1Q5TGL8 231 aa5.3□□□□□ -1.56
RAB3GAP1-206ENST00000497080 CCDC149Q6ZUS6 474 aa5.3□□□□□ -1.56
RAB3GAP1-206ENST00000497080 FAM156AQ8NDB6 213 aa5.3□□□□□ -1.56
RAB3GAP1-206ENST00000497080 JDP2Q8WYK2 163 aa5.3□□□□□ -1.56
RAB3GAP1-206ENST00000497080 LRTOMTQ8WZ04 291 aa5.3□□□□□ -1.56
RAB3GAP1-206ENST00000497080 APIPQ96GX9 242 aa5.3□□□□□ -1.56
RAB3GAP1-206ENST00000497080 FAM118BQ9BPY3 351 aa5.3□□□□□ -1.56
RAB3GAP1-206ENST00000497080 CHST8Q9H2A9 424 aa5.3□□□□□ -1.56
RAB3GAP1-206ENST00000497080 ZNF287Q9HBT7 754 aa5.3□□□□□ -1.56
RAB3GAP1-206ENST00000497080 ITGB1BP2Q9UKP3 347 aa5.3□□□□□ -1.56
RAB3GAP1-206ENST00000497080 M0R3H8 397 aa5.29□□□□□ -1.56
RAB3GAP1-206ENST00000497080 AGPSO00116 658 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms