RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 ANKRD42Q8N9B4 389 aa13.63□□□□□ -0.23
GARNL3-220ENST00000496711 FAM71DQ8N9W8 422 aa13.63□□□□□ -0.23
GARNL3-220ENST00000496711 CCDC197Q8NCU1 140 aa13.63□□□□□ -0.23
GARNL3-220ENST00000496711 KBTBD7Q8WVZ9 684 aa13.63□□□□□ -0.23
GARNL3-220ENST00000496711 P3H4Q92791 437 aa13.63□□□□□ -0.23
GARNL3-220ENST00000496711 RNF157Q96PX1 679 aa13.63□□□□□ -0.23
GARNL3-220ENST00000496711 KATNAL1Q9BW62 490 aa13.63□□□□□ -0.23
GARNL3-220ENST00000496711 DNAI2Q9GZS0 605 aa13.63□□□□□ -0.23
GARNL3-220ENST00000496711 SAMD15Q9P1V8 674 aa13.63□□□□□ -0.23
GARNL3-220ENST00000496711 SMIM28A0A1B0GU29 152 aa13.62□□□□□ -0.23
GARNL3-220ENST00000496711 DCAF8L1A6NGE4 600 aa13.62□□□□□ -0.23
GARNL3-220ENST00000496711 KPNA7A9QM74 516 aa13.62□□□□□ -0.23
GARNL3-220ENST00000496711 RASA4BC9J798 803 aa13.62□□□□□ -0.23
GARNL3-220ENST00000496711 E7ESA3 106 aa13.62□□□□□ -0.23
GARNL3-220ENST00000496711 RASA4O43374 803 aa13.62□□□□□ -0.23
GARNL3-220ENST00000496711 FSBPO95073 299 aa13.62□□□□□ -0.23
GARNL3-220ENST00000496711 KCNE1P15382 129 aa13.62□□□□□ -0.23
GARNL3-220ENST00000496711 PHBP35232 272 aa13.62□□□□□ -0.23
GARNL3-220ENST00000496711 XKR4Q5GH76 650 aa13.62□□□□□ -0.23
GARNL3-220ENST00000496711 UBXN11Q5T124 520 aa13.62□□□□□ -0.23
GARNL3-220ENST00000496711 SCYL2Q6P3W7 929 aa13.62□□□□□ -0.23
GARNL3-220ENST00000496711 DARS2Q6PI48 645 aaKnown RBP13.62□□□□□ -0.23
GARNL3-220ENST00000496711 NPNTQ6UXI9 565 aa13.62□□□□□ -0.23
GARNL3-220ENST00000496711 CAPN12Q6ZSI9 719 aa13.62□□□□□ -0.23
GARNL3-220ENST00000496711 ARHGEF18Q6ZSZ5 1173 aa13.62□□□□□ -0.23
GARNL3-220ENST00000496711 MICALL1Q8N3F8 863 aa13.62□□□□□ -0.23
GARNL3-220ENST00000496711 ANKS4BQ8N8V4 417 aa13.62□□□□□ -0.23
GARNL3-220ENST00000496711 ATP11CQ8NB49 1132 aa13.62□□□□□ -0.23
GARNL3-220ENST00000496711 MAML1Q92585 1016 aa13.62□□□□□ -0.23
GARNL3-220ENST00000496711 KHSRPQ92945 711 aaKnown RBP eCLIP13.62□□□□□ -0.23
GARNL3-220ENST00000496711 SNRNP25Q9BV90 132 aaKnown RBP13.62□□□□□ -0.23
GARNL3-220ENST00000496711 AP5M1Q9H0R1 490 aa13.62□□□□□ -0.23
GARNL3-220ENST00000496711 GDAP2Q9NXN4 497 aa13.62□□□□□ -0.23
GARNL3-220ENST00000496711 NKIRAS1Q9NYS0 192 aa13.62□□□□□ -0.23
GARNL3-220ENST00000496711 KLK14Q9P0G3 267 aa13.62□□□□□ -0.23
GARNL3-220ENST00000496711 SRCAPQ6ZRS2 3230 aa13.61□□□□□ -0.23
GARNL3-220ENST00000496711 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.61□□□□□ -0.23
GARNL3-220ENST00000496711 GOLGA6L7A0A1B0GV03 622 aa13.61□□□□□ -0.23
GARNL3-220ENST00000496711 C17orf102A2RUQ5 167 aa13.61□□□□□ -0.23
GARNL3-220ENST00000496711 POC1B-GALNT4F8VUJ3 575 aa13.61□□□□□ -0.23
GARNL3-220ENST00000496711 IGF2BP3O00425 579 aaKnown RBP eCLIP13.61□□□□□ -0.23
GARNL3-220ENST00000496711 MDM4O15151 490 aa13.61□□□□□ -0.23
GARNL3-220ENST00000496711 HCRTO43612 131 aa13.61□□□□□ -0.23
GARNL3-220ENST00000496711 BANF1O75531 89 aa13.61□□□□□ -0.23
GARNL3-220ENST00000496711 TMEM63AO94886 807 aa13.61□□□□□ -0.23
GARNL3-220ENST00000496711 CCDC130P13994 396 aa13.61□□□□□ -0.23
GARNL3-220ENST00000496711 TGM2P21980 687 aa13.61□□□□□ -0.23
GARNL3-220ENST00000496711 ADORA2BP29275 332 aa13.61□□□□□ -0.23
GARNL3-220ENST00000496711 STIP1P31948 543 aaKnown RBP13.61□□□□□ -0.23
GARNL3-220ENST00000496711 SCNN1AP37088 669 aa13.61□□□□□ -0.23
GARNL3-220ENST00000496711 PTPN9P43378 593 aa13.61□□□□□ -0.23
GARNL3-220ENST00000496711 TAF6P49848 677 aa13.61□□□□□ -0.23
GARNL3-220ENST00000496711 CRYBB1P53674 252 aaPredicted RBP13.61□□□□□ -0.23
GARNL3-220ENST00000496711 BASP1P80723 227 aaKnown RBP13.61□□□□□ -0.23
GARNL3-220ENST00000496711 GAD2Q05329 585 aa13.61□□□□□ -0.23
GARNL3-220ENST00000496711 ITIH4Q14624 930 aa13.61□□□□□ -0.23
GARNL3-220ENST00000496711 RASA2Q15283 850 aa13.61□□□□□ -0.23
GARNL3-220ENST00000496711 TAF1CQ15572 869 aaPredicted RBP13.61□□□□□ -0.23
GARNL3-220ENST00000496711 CCL14Q16627 93 aa13.61□□□□□ -0.23
GARNL3-220ENST00000496711 SV2CQ496J9 727 aa13.61□□□□□ -0.23
GARNL3-220ENST00000496711 CHADLQ6NUI6 762 aa13.61□□□□□ -0.23
GARNL3-220ENST00000496711 PPP1R21Q6ZMI0 780 aa13.61□□□□□ -0.23
GARNL3-220ENST00000496711 PIGWQ7Z7B1 504 aa13.61□□□□□ -0.23
GARNL3-220ENST00000496711 TRABD2AQ86V40 505 aa13.61□□□□□ -0.23
GARNL3-220ENST00000496711 ZC3H18Q86VM9 953 aaKnown RBP13.61□□□□□ -0.23
GARNL3-220ENST00000496711 TAX1BP1Q86VP1 789 aa13.61□□□□□ -0.23
GARNL3-220ENST00000496711 ANKMY2Q8IV38 441 aa13.61□□□□□ -0.23
GARNL3-220ENST00000496711 SCUBE3Q8IX30 993 aa13.61□□□□□ -0.23
GARNL3-220ENST00000496711 CRYBG2Q8N1P7 616 aa13.61□□□□□ -0.23
GARNL3-220ENST00000496711 ANKRD52Q8NB46 1076 aa13.61□□□□□ -0.23
GARNL3-220ENST00000496711 SNX25Q9H3E2 840 aa13.61□□□□□ -0.23
GARNL3-220ENST00000496711 PCDH18Q9HCL0 1135 aa13.61□□□□□ -0.23
GARNL3-220ENST00000496711 UBN1Q9NPG3 1134 aa13.61□□□□□ -0.23
GARNL3-220ENST00000496711 CYLDQ9NQC7 956 aa13.61□□□□□ -0.23
GARNL3-220ENST00000496711 RNF19AQ9NV58 838 aa13.61□□□□□ -0.23
GARNL3-220ENST00000496711 GPATCH2LQ9NWQ4 482 aa13.61□□□□□ -0.23
GARNL3-220ENST00000496711 SLC24A2Q9UI40 661 aa13.61□□□□□ -0.23
GARNL3-220ENST00000496711 XPO7Q9UIA9 1087 aaKnown RBP13.61□□□□□ -0.23
GARNL3-220ENST00000496711 Q9Y3F1 56 aa13.61□□□□□ -0.23
GARNL3-220ENST00000496711 CLUHO75153 1309 aa13.61□□□□□ -0.23
GARNL3-220ENST00000496711 ZNF487B1APH4 448 aa13.61□□□□□ -0.23
GARNL3-220ENST00000496711 APOL1O14791 398 aa13.61□□□□□ -0.23
GARNL3-220ENST00000496711 GABBR2O75899 941 aa13.61□□□□□ -0.23
GARNL3-220ENST00000496711 FGFR1P11362 822 aa13.61□□□□□ -0.23
GARNL3-220ENST00000496711 STX2P32856 288 aa13.61□□□□□ -0.23
GARNL3-220ENST00000496711 ZNF200P98182 395 aaPredicted RBP13.61□□□□□ -0.23
GARNL3-220ENST00000496711 BEX3Q00994 111 aa13.61□□□□□ -0.23
GARNL3-220ENST00000496711 RNASELQ05823 741 aaKnown RBP13.61□□□□□ -0.23
GARNL3-220ENST00000496711 MPP2Q14168 576 aa13.61□□□□□ -0.23
GARNL3-220ENST00000496711 ANKRD20A8PQ5CZ79 823 aa13.61□□□□□ -0.23
GARNL3-220ENST00000496711 ZC3H12AQ5D1E8 599 aaKnown RBP13.61□□□□□ -0.23
GARNL3-220ENST00000496711 FNBP1LQ5T0N5 605 aa13.61□□□□□ -0.23
GARNL3-220ENST00000496711 SLC26A9Q7LBE3 791 aa13.61□□□□□ -0.23
GARNL3-220ENST00000496711 C7orf31Q8N865 590 aa13.61□□□□□ -0.23
GARNL3-220ENST00000496711 APPL2Q8NEU8 664 aa13.61□□□□□ -0.23
GARNL3-220ENST00000496711 PYROXD1Q8WU10 500 aa13.61□□□□□ -0.23
GARNL3-220ENST00000496711 CKAP2Q8WWK9 683 aa13.61□□□□□ -0.23
GARNL3-220ENST00000496711 LPIN3Q9BQK8 851 aa13.61□□□□□ -0.23
GARNL3-220ENST00000496711 ZNF670Q9BS34 389 aa13.61□□□□□ -0.23
GARNL3-220ENST00000496711 B3GNT5Q9BYG0 378 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms