RNA–Protein interactions for RNA: ENST00000496335.1

PDAP1-204, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 302 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-204ENST00000496335 TTC39CQ8N584 583 aa15.31■□□□□ 0.04
PDAP1-204ENST00000496335 PDZD8Q8NEN9 1154 aa15.31■□□□□ 0.04
PDAP1-204ENST00000496335 OSCP1Q8WVF1 389 aa15.31■□□□□ 0.04
PDAP1-204ENST00000496335 OVCA2Q8WZ82 227 aa15.31■□□□□ 0.04
PDAP1-204ENST00000496335 CHFRQ96EP1 664 aa15.31■□□□□ 0.04
PDAP1-204ENST00000496335 MSANTD3Q96H12 275 aa15.31■□□□□ 0.04
PDAP1-204ENST00000496335 CCSER2Q9H7U1 834 aa15.31■□□□□ 0.04
PDAP1-204ENST00000496335 LMBRD1Q9NUN5 540 aa15.31■□□□□ 0.04
PDAP1-204ENST00000496335 COMMD8Q9NX08 183 aa15.31■□□□□ 0.04
PDAP1-204ENST00000496335 USP34Q70CQ2 3546 aa15.31■□□□□ 0.04
PDAP1-204ENST00000496335 FANCMQ8IYD8 2048 aa15.31■□□□□ 0.04
PDAP1-204ENST00000496335 PTPRZ1P23471 2315 aaPredicted RBP15.31■□□□□ 0.04
PDAP1-204ENST00000496335 COCHO43405 550 aa15.3■□□□□ 0.04
PDAP1-204ENST00000496335 LAMTOR5O43504 91 aa15.3■□□□□ 0.04
PDAP1-204ENST00000496335 ZDHHC11BP0C7U3 371 aa15.3■□□□□ 0.04
PDAP1-204ENST00000496335 MBL2P11226 248 aaPredicted RBP15.3■□□□□ 0.04
PDAP1-204ENST00000496335 TCF3P15923 654 aa15.3■□□□□ 0.04
PDAP1-204ENST00000496335 ACO1P21399 889 aaKnown RBP15.3■□□□□ 0.04
PDAP1-204ENST00000496335 IFNAR2P48551 515 aa15.3■□□□□ 0.04
PDAP1-204ENST00000496335 CSTF1Q05048 431 aaKnown RBP15.3■□□□□ 0.04
PDAP1-204ENST00000496335 KCNH2Q12809 1159 aa15.3■□□□□ 0.04
PDAP1-204ENST00000496335 PDGFRLQ15198 375 aa15.3■□□□□ 0.04
PDAP1-204ENST00000496335 EML3Q32P44 896 aa15.3■□□□□ 0.04
PDAP1-204ENST00000496335 HECTD3Q5T447 861 aa15.3■□□□□ 0.04
PDAP1-204ENST00000496335 NAIF1Q69YI7 327 aaPredicted RBP15.3■□□□□ 0.04
PDAP1-204ENST00000496335 C1orf228Q6PIY5 440 aa15.3■□□□□ 0.04
PDAP1-204ENST00000496335 WDR87Q6ZQQ6 2873 aa15.3■□□□□ 0.04
PDAP1-204ENST00000496335 LMO3Q8TAP4 145 aa15.3■□□□□ 0.04
PDAP1-204ENST00000496335 DUSP16Q9BY84 665 aa15.3■□□□□ 0.04
PDAP1-204ENST00000496335 DNAI2Q9GZS0 605 aa15.3■□□□□ 0.04
PDAP1-204ENST00000496335 CHRDQ9H2X0 955 aa15.3■□□□□ 0.04
PDAP1-204ENST00000496335 ECT2Q9H8V3 914 aa15.3■□□□□ 0.04
PDAP1-204ENST00000496335 RWDD2AQ9UIY3 292 aa15.3■□□□□ 0.04
PDAP1-204ENST00000496335 PMM2O15305 246 aa15.29■□□□□ 0.04
PDAP1-204ENST00000496335 CYP26A1O43174 497 aa15.29■□□□□ 0.04
PDAP1-204ENST00000496335 GNA14O95837 355 aa15.29■□□□□ 0.04
PDAP1-204ENST00000496335 MARSP56192 900 aaKnown RBP15.29■□□□□ 0.04
PDAP1-204ENST00000496335 GAS6Q14393 721 aa15.29■□□□□ 0.04
PDAP1-204ENST00000496335 SNX30Q5VWJ9 437 aa15.29■□□□□ 0.04
PDAP1-204ENST00000496335 TSSK4Q6SA08 328 aa15.29■□□□□ 0.04
PDAP1-204ENST00000496335 Q6ZS52 159 aa15.29■□□□□ 0.04
PDAP1-204ENST00000496335 CREBRFQ8IUR6 639 aa15.29■□□□□ 0.04
PDAP1-204ENST00000496335 UBR7Q8N806 425 aa15.29■□□□□ 0.04
PDAP1-204ENST00000496335 KAT5Q92993 513 aa15.29■□□□□ 0.04
PDAP1-204ENST00000496335 ATP2A3Q93084 1043 aa15.29■□□□□ 0.04
PDAP1-204ENST00000496335 NT5C1BQ96P26 610 aa15.29■□□□□ 0.04
PDAP1-204ENST00000496335 FBXO44Q9H4M3 255 aa15.29■□□□□ 0.04
PDAP1-204ENST00000496335 FBRSL1Q9HCM7 1045 aaKnown RBP15.29■□□□□ 0.04
PDAP1-204ENST00000496335 OSER1Q9NX31 292 aa15.29■□□□□ 0.04
PDAP1-204ENST00000496335 CFAP97Q9P2B7 532 aa15.29■□□□□ 0.04
PDAP1-204ENST00000496335 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.29■□□□□ 0.04
PDAP1-204ENST00000496335 R4GN57 208 aa15.29■□□□□ 0.04
PDAP1-204ENST00000496335 FAM186AA6NE01 2351 aa15.29■□□□□ 0.04
PDAP1-204ENST00000496335 PROB1E7EW31 1015 aa15.28■□□□□ 0.04
PDAP1-204ENST00000496335 AFPP02771 609 aaKnown RBP15.28■□□□□ 0.04
PDAP1-204ENST00000496335 CCDC192P0DO97 292 aa15.28■□□□□ 0.04
PDAP1-204ENST00000496335 TBXAS1P24557 533 aaPredicted RBP15.28■□□□□ 0.04
PDAP1-204ENST00000496335 GJA4P35212 333 aa15.28■□□□□ 0.04
PDAP1-204ENST00000496335 KIF11P52732 1056 aa15.28■□□□□ 0.04
PDAP1-204ENST00000496335 ARHGAP17Q68EM7 881 aa15.28■□□□□ 0.04
PDAP1-204ENST00000496335 RRAGAQ7L523 313 aa15.28■□□□□ 0.04
PDAP1-204ENST00000496335 ARHGEF19Q8IW93 802 aa15.28■□□□□ 0.04
PDAP1-204ENST00000496335 PPM1KQ8N3J5 372 aa15.28■□□□□ 0.04
PDAP1-204ENST00000496335 CPA6Q8N4T0 437 aa15.28■□□□□ 0.04
PDAP1-204ENST00000496335 MLKLQ8NB16 471 aa15.28■□□□□ 0.04
PDAP1-204ENST00000496335 EHBP1Q8NDI1 1231 aa15.28■□□□□ 0.04
PDAP1-204ENST00000496335 ZFRQ96KR1 1074 aaKnown RBP15.28■□□□□ 0.04
PDAP1-204ENST00000496335 NUP62CLQ9H1M0 184 aa15.28■□□□□ 0.04
PDAP1-204ENST00000496335 FAM124BQ9H5Z6 455 aaPredicted RBP15.28■□□□□ 0.04
PDAP1-204ENST00000496335 NMUR1Q9HB89 426 aa15.28■□□□□ 0.04
PDAP1-204ENST00000496335 SCML2Q9UQR0 700 aa15.28■□□□□ 0.04
PDAP1-204ENST00000496335 A0A1W2PQH9 124 aa15.27■□□□□ 0.04
PDAP1-204ENST00000496335 TRDMT1O14717 391 aaKnown RBP15.27■□□□□ 0.04
PDAP1-204ENST00000496335 P4HA2O15460 535 aa15.27■□□□□ 0.04
PDAP1-204ENST00000496335 TLR5O60602 858 aa15.27■□□□□ 0.04
PDAP1-204ENST00000496335 FGFR1OPO95684 399 aaKnown RBP15.27■□□□□ 0.04
PDAP1-204ENST00000496335 TBX18O95935 607 aa15.27■□□□□ 0.04
PDAP1-204ENST00000496335 CD19P15391 556 aa15.27■□□□□ 0.04
PDAP1-204ENST00000496335 TUBP50607 506 aa15.27■□□□□ 0.04
PDAP1-204ENST00000496335 GALK1P51570 392 aa15.27■□□□□ 0.04
PDAP1-204ENST00000496335 YWHAEP62258 255 aaKnown RBP15.27■□□□□ 0.04
PDAP1-204ENST00000496335 CETN1Q12798 172 aa15.27■□□□□ 0.04
PDAP1-204ENST00000496335 CCINQ13939 588 aa15.27■□□□□ 0.04
PDAP1-204ENST00000496335 LRRC32Q14392 662 aa15.27■□□□□ 0.04
PDAP1-204ENST00000496335 GOLGA7BQ2TAP0 167 aa15.27■□□□□ 0.04
PDAP1-204ENST00000496335 DPCR1Q3MIW9 517 aa15.27■□□□□ 0.04
PDAP1-204ENST00000496335 TMEM196Q5HYL7 178 aa15.27■□□□□ 0.04
PDAP1-204ENST00000496335 DGKKQ5KSL6 1271 aa15.27■□□□□ 0.04
PDAP1-204ENST00000496335 FSTL4Q6MZW2 842 aa15.27■□□□□ 0.04
PDAP1-204ENST00000496335 TMEM270Q6UE05 265 aa15.27■□□□□ 0.04
PDAP1-204ENST00000496335 ASCL5Q7RTU5 278 aa15.27■□□□□ 0.04
PDAP1-204ENST00000496335 TTC30AQ86WT1 665 aa15.27■□□□□ 0.04
PDAP1-204ENST00000496335 IRF2BP1Q8IU81 584 aa15.27■□□□□ 0.04
PDAP1-204ENST00000496335 ANKRD52Q8NB46 1076 aa15.27■□□□□ 0.04
PDAP1-204ENST00000496335 WBP2Q969T9 261 aa15.27■□□□□ 0.04
PDAP1-204ENST00000496335 CNOT6LQ96LI5 555 aaKnown RBP15.27■□□□□ 0.04
PDAP1-204ENST00000496335 NACA2Q9H009 215 aa15.27■□□□□ 0.04
PDAP1-204ENST00000496335 PNPLA8Q9NP80 782 aa15.27■□□□□ 0.04
PDAP1-204ENST00000496335 TLR8Q9NR97 1041 aaKnown RBP15.27■□□□□ 0.04
PDAP1-204ENST00000496335 NUDT5Q9UKK9 219 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms