RNA–Protein interactions for RNA: ENST00000495948.1

COL9A2-210, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 2

Gene COL9A2, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-210ENST00000495948 SIX5Q8N196 739 aa21.14■□□□□ 0.97
COL9A2-210ENST00000495948 ARL14EPQ8N8R7 260 aaPredicted RBP21.14■□□□□ 0.97
COL9A2-210ENST00000495948 TFAP2BQ92481 460 aa21.14■□□□□ 0.97
COL9A2-210ENST00000495948 PBXIP1Q96AQ6 731 aa21.14■□□□□ 0.97
COL9A2-210ENST00000495948 SLC22A12Q96S37 553 aa21.14■□□□□ 0.97
COL9A2-210ENST00000495948 CA14Q9ULX7 337 aa21.14■□□□□ 0.97
COL9A2-210ENST00000495948 USP3Q9Y6I4 520 aa21.14■□□□□ 0.97
COL9A2-210ENST00000495948 KRBA1A5PL33 1030 aa21.13■□□□□ 0.97
COL9A2-210ENST00000495948 SMTNL1A8MU46 457 aa21.13■□□□□ 0.97
COL9A2-210ENST00000495948 ZNF263O14978 683 aa21.13■□□□□ 0.97
COL9A2-210ENST00000495948 ZNF165P49910 485 aa21.13■□□□□ 0.97
COL9A2-210ENST00000495948 SLC7A9P82251 487 aa21.13■□□□□ 0.97
COL9A2-210ENST00000495948 PDE4CQ08493 712 aa21.13■□□□□ 0.97
COL9A2-210ENST00000495948 KCNMA1Q12791 1236 aa21.13■□□□□ 0.97
COL9A2-210ENST00000495948 MLF2Q15773 248 aaPredicted RBP21.13■□□□□ 0.97
COL9A2-210ENST00000495948 ZNF77Q15935 545 aa21.13■□□□□ 0.97
COL9A2-210ENST00000495948 CNGA2Q16280 664 aa21.13■□□□□ 0.97
COL9A2-210ENST00000495948 FKBP15Q5T1M5 1219 aa21.13■□□□□ 0.97
COL9A2-210ENST00000495948 FBXL6Q8N531 539 aa21.13■□□□□ 0.97
COL9A2-210ENST00000495948 LRRC3BQ96PB8 259 aa21.13■□□□□ 0.97
COL9A2-210ENST00000495948 ZSWIM1Q9BR11 485 aa21.13■□□□□ 0.97
COL9A2-210ENST00000495948 VPS16Q9H269 839 aa21.13■□□□□ 0.97
COL9A2-210ENST00000495948 PLCB1Q9NQ66 1216 aa21.13■□□□□ 0.97
COL9A2-210ENST00000495948 TLR8Q9NR97 1041 aaKnown RBP21.13■□□□□ 0.97
COL9A2-210ENST00000495948 AJAP1Q9UKB5 411 aaPredicted RBP21.13■□□□□ 0.97
COL9A2-210ENST00000495948 TICRRQ7Z2Z1 1910 aa21.12■□□□□ 0.97
COL9A2-210ENST00000495948 LGALS16A8MUM7 142 aa21.12■□□□□ 0.97
COL9A2-210ENST00000495948 BECN2A8MW95 431 aa21.12■□□□□ 0.97
COL9A2-210ENST00000495948 M0QYV0 167 aa21.12■□□□□ 0.97
COL9A2-210ENST00000495948 CYP26A1O43174 497 aa21.12■□□□□ 0.97
COL9A2-210ENST00000495948 PDGFBP01127 241 aaPredicted RBP21.12■□□□□ 0.97
COL9A2-210ENST00000495948 HDCP19113 662 aa21.12■□□□□ 0.97
COL9A2-210ENST00000495948 PRKCQQ04759 706 aa21.12■□□□□ 0.97
COL9A2-210ENST00000495948 ARHGAP44Q17R89 818 aa21.12■□□□□ 0.97
COL9A2-210ENST00000495948 CWF19L1Q69YN2 538 aaKnown RBP21.12■□□□□ 0.97
COL9A2-210ENST00000495948 SUGP1Q8IWZ8 645 aaKnown RBP21.12■□□□□ 0.97
COL9A2-210ENST00000495948 RIN3Q8TB24 985 aa21.12■□□□□ 0.97
COL9A2-210ENST00000495948 CYP2S1Q96SQ9 504 aa21.12■□□□□ 0.97
COL9A2-210ENST00000495948 LSM14BQ9BX40 385 aaKnown RBP21.12■□□□□ 0.97
COL9A2-210ENST00000495948 MFSD1Q9H3U5 465 aa21.12■□□□□ 0.97
COL9A2-210ENST00000495948 THG1LQ9NWX6 298 aaKnown RBP21.12■□□□□ 0.97
COL9A2-210ENST00000495948 DNAJC12Q9UKB3 198 aa21.12■□□□□ 0.97
COL9A2-210ENST00000495948 KMT2EQ8IZD2 1858 aa21.11■□□□□ 0.97
COL9A2-210ENST00000495948 LRRC10BA6NIK2 292 aa21.11■□□□□ 0.97
COL9A2-210ENST00000495948 ABL1P00519 1130 aa21.11■□□□□ 0.97
COL9A2-210ENST00000495948 GNA15P30679 374 aa21.11■□□□□ 0.97
COL9A2-210ENST00000495948 PSEN1P49768 467 aa21.11■□□□□ 0.97
COL9A2-210ENST00000495948 MTF1Q14872 753 aa21.11■□□□□ 0.97
COL9A2-210ENST00000495948 ZSCAN23Q3MJ62 389 aa21.11■□□□□ 0.97
COL9A2-210ENST00000495948 HECTD3Q5T447 861 aa21.11■□□□□ 0.97
COL9A2-210ENST00000495948 KLHDC7AQ5VTJ3 777 aa21.11■□□□□ 0.97
COL9A2-210ENST00000495948 APTXQ7Z2E3 356 aaKnown RBP21.11■□□□□ 0.97
COL9A2-210ENST00000495948 GPIHBP1Q8IV16 184 aa21.11■□□□□ 0.97
COL9A2-210ENST00000495948 KIAA1958Q8N8K9 716 aa21.11■□□□□ 0.97
COL9A2-210ENST00000495948 KCTD13Q8WZ19 329 aa21.11■□□□□ 0.97
COL9A2-210ENST00000495948 SHDQ96IW2 340 aa21.11■□□□□ 0.97
COL9A2-210ENST00000495948 CYLDQ9NQC7 956 aa21.11■□□□□ 0.97
COL9A2-210ENST00000495948 DAAM1Q9Y4D1 1078 aa21.11■□□□□ 0.97
COL9A2-210ENST00000495948 FHOD1Q9Y613 1164 aa21.11■□□□□ 0.97
COL9A2-210ENST00000495948 COL4A3Q01955 1670 aa21.1■□□□□ 0.97
COL9A2-210ENST00000495948 TULP2O00295 520 aa21.1■□□□□ 0.97
COL9A2-210ENST00000495948 COCHO43405 550 aa21.1■□□□□ 0.97
COL9A2-210ENST00000495948 MED7O43513 233 aa21.1■□□□□ 0.97
COL9A2-210ENST00000495948 TLR5O60602 858 aa21.1■□□□□ 0.97
COL9A2-210ENST00000495948 CAVIN2O95810 425 aa21.1■□□□□ 0.97
COL9A2-210ENST00000495948 UCHL3P15374 230 aa21.1■□□□□ 0.97
COL9A2-210ENST00000495948 CDK11BP21127 795 aaKnown RBP21.1■□□□□ 0.97
COL9A2-210ENST00000495948 SLC44A4Q53GD3 710 aa21.1■□□□□ 0.97
COL9A2-210ENST00000495948 DDX42Q86XP3 938 aaKnown RBP eCLIP21.1■□□□□ 0.97
COL9A2-210ENST00000495948 SH3RF2Q8TEC5 729 aa21.1■□□□□ 0.97
COL9A2-210ENST00000495948 MSANTD3Q96H12 275 aa21.1■□□□□ 0.97
COL9A2-210ENST00000495948 DDX23Q9BUQ8 820 aaKnown RBP21.1■□□□□ 0.97
COL9A2-210ENST00000495948 NAA15Q9BXJ9 866 aaKnown RBP21.1■□□□□ 0.97
COL9A2-210ENST00000495948 RNF38Q9H0F5 515 aa21.1■□□□□ 0.97
COL9A2-210ENST00000495948 GANQ9H2C0 597 aa21.1■□□□□ 0.97
COL9A2-210ENST00000495948 TBC1D17Q9HA65 648 aa21.1■□□□□ 0.97
COL9A2-210ENST00000495948 CHORDC1Q9UHD1 332 aaPredicted RBP21.1■□□□□ 0.97
COL9A2-210ENST00000495948 CPQQ9Y646 472 aa21.1■□□□□ 0.97
COL9A2-210ENST00000495948 ATP1A3P13637 1013 aa21.09■□□□□ 0.97
COL9A2-210ENST00000495948 STARD6P59095 220 aa21.09■□□□□ 0.97
COL9A2-210ENST00000495948 IQCB1Q15051 598 aa21.09■□□□□ 0.97
COL9A2-210ENST00000495948 IER5LQ5T953 404 aa21.09■□□□□ 0.97
COL9A2-210ENST00000495948 TPRG1Q6ZUI0 275 aa21.09■□□□□ 0.97
COL9A2-210ENST00000495948 SCML4Q8N228 414 aa21.09■□□□□ 0.97
COL9A2-210ENST00000495948 UBA3Q8TBC4 463 aa21.09■□□□□ 0.97
COL9A2-210ENST00000495948 SLC35F5Q8WV83 523 aa21.09■□□□□ 0.97
COL9A2-210ENST00000495948 SECISBP2LQ93073 1101 aaKnown RBP21.09■□□□□ 0.97
COL9A2-210ENST00000495948 CCSER2Q9H7U1 834 aa21.09■□□□□ 0.97
COL9A2-210ENST00000495948 LRRC4Q9HBW1 653 aa21.09■□□□□ 0.97
COL9A2-210ENST00000495948 HEBP1Q9NRV9 189 aa21.09■□□□□ 0.97
COL9A2-210ENST00000495948 SIK3Q9Y2K2 1263 aa21.09■□□□□ 0.97
COL9A2-210ENST00000495948 A0A1W2PQH9 124 aa21.08■□□□□ 0.97
COL9A2-210ENST00000495948 THAP12O43422 761 aa21.08■□□□□ 0.97
COL9A2-210ENST00000495948 CALCAP01258 141 aa21.08■□□□□ 0.97
COL9A2-210ENST00000495948 MBL2P11226 248 aaPredicted RBP21.08■□□□□ 0.97
COL9A2-210ENST00000495948 GLULP15104 373 aa21.08■□□□□ 0.97
COL9A2-210ENST00000495948 USP8P40818 1118 aa21.08■□□□□ 0.97
COL9A2-210ENST00000495948 PGFP49763 221 aa21.08■□□□□ 0.97
COL9A2-210ENST00000495948 TKTL1P51854 596 aa21.08■□□□□ 0.97
COL9A2-210ENST00000495948 MLLT6P55198 1093 aaPredicted RBP21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms