RNA–Protein interactions for RNA: ENST00000495784.1

CLCNKA-207, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 727 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-207ENST00000495784 CCDC6Q16204 474 aa19.53■□□□□ 0.72
CLCNKA-207ENST00000495784 HECTD3Q5T447 861 aa19.53■□□□□ 0.72
CLCNKA-207ENST00000495784 PAQR9Q6ZVX9 377 aa19.53■□□□□ 0.72
CLCNKA-207ENST00000495784 SV2AQ7L0J3 742 aa19.53■□□□□ 0.72
CLCNKA-207ENST00000495784 FUKQ8N0W3 1084 aa19.53■□□□□ 0.72
CLCNKA-207ENST00000495784 USP33Q8TEY7 942 aa19.53■□□□□ 0.72
CLCNKA-207ENST00000495784 TAF4BQ92750 862 aa19.53■□□□□ 0.72
CLCNKA-207ENST00000495784 ZC3H10Q96K80 434 aaKnown RBP19.53■□□□□ 0.72
CLCNKA-207ENST00000495784 TBC1D14Q9P2M4 693 aa19.53■□□□□ 0.72
CLCNKA-207ENST00000495784 EBF1Q9UH73 591 aa19.53■□□□□ 0.72
CLCNKA-207ENST00000495784 CHORDC1Q9UHD1 332 aaPredicted RBP19.53■□□□□ 0.72
CLCNKA-207ENST00000495784 HPSEQ9Y251 543 aa19.53■□□□□ 0.72
CLCNKA-207ENST00000495784 K7EQS6 105 aa19.52■□□□□ 0.72
CLCNKA-207ENST00000495784 IKBKBO14920 756 aa19.52■□□□□ 0.72
CLCNKA-207ENST00000495784 COCHO43405 550 aa19.52■□□□□ 0.72
CLCNKA-207ENST00000495784 TRIM21P19474 475 aaKnown RBP19.52■□□□□ 0.72
CLCNKA-207ENST00000495784 DGKEP52429 567 aa19.52■□□□□ 0.72
CLCNKA-207ENST00000495784 ORC1Q13415 861 aa19.52■□□□□ 0.72
CLCNKA-207ENST00000495784 SF3A2Q15428 464 aaKnown RBP19.52■□□□□ 0.72
CLCNKA-207ENST00000495784 GAB4Q2WGN9 574 aa19.52■□□□□ 0.72
CLCNKA-207ENST00000495784 NACA2Q9H009 215 aa19.52■□□□□ 0.72
CLCNKA-207ENST00000495784 PCDHGA5Q9Y5G8 931 aa19.52■□□□□ 0.72
CLCNKA-207ENST00000495784 SPTBN2O15020 2390 aa19.51■□□□□ 0.71
CLCNKA-207ENST00000495784 SDK1Q7Z5N4 2213 aa19.51■□□□□ 0.71
CLCNKA-207ENST00000495784 E2F8A0AVK6 867 aa19.51■□□□□ 0.71
CLCNKA-207ENST00000495784 TNFRSF10BO14763 440 aa19.51■□□□□ 0.71
CLCNKA-207ENST00000495784 ASS1P00966 412 aaKnown RBP19.51■□□□□ 0.71
CLCNKA-207ENST00000495784 ZNF806P0C7X5 589 aa19.51■□□□□ 0.71
CLCNKA-207ENST00000495784 ADH5P11766 374 aa19.51■□□□□ 0.71
CLCNKA-207ENST00000495784 CCDC130P13994 396 aa19.51■□□□□ 0.71
CLCNKA-207ENST00000495784 TUBP50607 506 aa19.51■□□□□ 0.71
CLCNKA-207ENST00000495784 VAMP7P51809 220 aa19.51■□□□□ 0.71
CLCNKA-207ENST00000495784 NDUFA8P51970 172 aa19.51■□□□□ 0.71
CLCNKA-207ENST00000495784 NDST1P52848 882 aa19.51■□□□□ 0.71
CLCNKA-207ENST00000495784 PLK5Q496M5 336 aa19.51■□□□□ 0.71
CLCNKA-207ENST00000495784 RHBDF2Q6PJF5 856 aa19.51■□□□□ 0.71
CLCNKA-207ENST00000495784 UNC93AQ86WB7 457 aa19.51■□□□□ 0.71
CLCNKA-207ENST00000495784 CCDC33Q8N5R6 958 aa19.51■□□□□ 0.71
CLCNKA-207ENST00000495784 SLC2A14Q8TDB8 520 aa19.51■□□□□ 0.71
CLCNKA-207ENST00000495784 CHAMP1Q96JM3 812 aa19.51■□□□□ 0.71
CLCNKA-207ENST00000495784 PNKPQ96T60 521 aa19.51■□□□□ 0.71
CLCNKA-207ENST00000495784 IMPG2Q9BZV3 1241 aa19.51■□□□□ 0.71
CLCNKA-207ENST00000495784 COMMD8Q9NX08 183 aa19.51■□□□□ 0.71
CLCNKA-207ENST00000495784 IL37Q9NZH6 218 aa19.51■□□□□ 0.71
CLCNKA-207ENST00000495784 GMIPQ9P107 970 aa19.51■□□□□ 0.71
CLCNKA-207ENST00000495784 TRAF3IP3Q9Y228 551 aa19.51■□□□□ 0.71
CLCNKA-207ENST00000495784 SH3BP1Q9Y3L3 701 aa19.51■□□□□ 0.71
CLCNKA-207ENST00000495784 RALGAPA1Q6GYQ0 2036 aa19.51■□□□□ 0.71
CLCNKA-207ENST00000495784 DCLK1O15075 740 aa19.5■□□□□ 0.71
CLCNKA-207ENST00000495784 RHOBTB1O94844 696 aa19.5■□□□□ 0.71
CLCNKA-207ENST00000495784 HLA-DRAP01903 254 aa19.5■□□□□ 0.71
CLCNKA-207ENST00000495784 APODP05090 189 aa19.5■□□□□ 0.71
CLCNKA-207ENST00000495784 PRR29P0C7W0 189 aa19.5■□□□□ 0.71
CLCNKA-207ENST00000495784 NR2F2P24468 414 aa19.5■□□□□ 0.71
CLCNKA-207ENST00000495784 GBP1P32455 592 aa19.5■□□□□ 0.71
CLCNKA-207ENST00000495784 MPLP40238 635 aa19.5■□□□□ 0.71
CLCNKA-207ENST00000495784 EIF2DP41214 584 aaKnown RBP19.5■□□□□ 0.71
CLCNKA-207ENST00000495784 ASPAP45381 313 aa19.5■□□□□ 0.71
CLCNKA-207ENST00000495784 SLC6A11P48066 632 aa19.5■□□□□ 0.71
CLCNKA-207ENST00000495784 MRPS21P82921 87 aaKnown RBP19.5■□□□□ 0.71
CLCNKA-207ENST00000495784 PPM1JQ5JR12 505 aa19.5■□□□□ 0.71
CLCNKA-207ENST00000495784 SNX30Q5VWJ9 437 aa19.5■□□□□ 0.71
CLCNKA-207ENST00000495784 IL31Q6EBC2 164 aa19.5■□□□□ 0.71
CLCNKA-207ENST00000495784 SPOPLQ6IQ16 392 aa19.5■□□□□ 0.71
CLCNKA-207ENST00000495784 ANO7Q6IWH7 933 aa19.5■□□□□ 0.71
CLCNKA-207ENST00000495784 CRYBG2Q8N1P7 616 aa19.5■□□□□ 0.71
CLCNKA-207ENST00000495784 OTUB2Q96DC9 234 aa19.5■□□□□ 0.71
CLCNKA-207ENST00000495784 SMOQ99835 787 aa19.5■□□□□ 0.71
CLCNKA-207ENST00000495784 FBXO44Q9H4M3 255 aa19.5■□□□□ 0.71
CLCNKA-207ENST00000495784 CCSER2Q9H7U1 834 aa19.5■□□□□ 0.71
CLCNKA-207ENST00000495784 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.5■□□□□ 0.71
CLCNKA-207ENST00000495784 ARHGEF4Q9NR80 690 aa19.5■□□□□ 0.71
CLCNKA-207ENST00000495784 FAM49BQ9NUQ9 324 aa19.5■□□□□ 0.71
CLCNKA-207ENST00000495784 HMGXB4Q9UGU5 601 aa19.5■□□□□ 0.71
CLCNKA-207ENST00000495784 MMP17Q9ULZ9 603 aa19.5■□□□□ 0.71
CLCNKA-207ENST00000495784 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.49■□□□□ 0.71
CLCNKA-207ENST00000495784 MAPK13O15264 365 aa19.49■□□□□ 0.71
CLCNKA-207ENST00000495784 RHOBTB3O94955 611 aa19.49■□□□□ 0.71
CLCNKA-207ENST00000495784 KAT7O95251 611 aa19.49■□□□□ 0.71
CLCNKA-207ENST00000495784 KRT13P13646 458 aa19.49■□□□□ 0.71
CLCNKA-207ENST00000495784 KCNA4P22459 653 aa19.49■□□□□ 0.71
CLCNKA-207ENST00000495784 MAP3K7CLP57077 242 aa19.49■□□□□ 0.71
CLCNKA-207ENST00000495784 USP39Q53GS9 565 aaKnown RBP19.49■□□□□ 0.71
CLCNKA-207ENST00000495784 C1orf220Q5T0J3 134 aa19.49■□□□□ 0.71
CLCNKA-207ENST00000495784 INTS8Q75QN2 995 aaKnown RBP19.49■□□□□ 0.71
CLCNKA-207ENST00000495784 TTC30AQ86WT1 665 aa19.49■□□□□ 0.71
CLCNKA-207ENST00000495784 C12orf29Q8N999 325 aa19.49■□□□□ 0.71
CLCNKA-207ENST00000495784 ZMIZ2Q8NF64 920 aa19.49■□□□□ 0.71
CLCNKA-207ENST00000495784 DDX1Q92499 740 aaKnown RBP19.49■□□□□ 0.71
CLCNKA-207ENST00000495784 ZFRQ96KR1 1074 aaKnown RBP19.49■□□□□ 0.71
CLCNKA-207ENST00000495784 DUSP15Q9H1R2 295 aaPredicted RBP19.49■□□□□ 0.71
CLCNKA-207ENST00000495784 VPS45Q9NRW7 570 aa19.49■□□□□ 0.71
CLCNKA-207ENST00000495784 MAPK8IP1Q9UQF2 711 aa19.49■□□□□ 0.71
CLCNKA-207ENST00000495784 ZDHHC9Q9Y397 364 aa19.49■□□□□ 0.71
CLCNKA-207ENST00000495784 ATP6V1DQ9Y5K8 247 aa19.49■□□□□ 0.71
CLCNKA-207ENST00000495784 SPAG17Q6Q759 2223 aa19.48■□□□□ 0.71
CLCNKA-207ENST00000495784 FAM237AA0A1B0GTK4 181 aa19.48■□□□□ 0.71
CLCNKA-207ENST00000495784 FAM92AA1XBS5 289 aa19.48■□□□□ 0.71
CLCNKA-207ENST00000495784 TLR5O60602 858 aa19.48■□□□□ 0.71
CLCNKA-207ENST00000495784 BEST1O76090 585 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms