RNA–Protein interactions for RNA: ENST00000495497.1

HDAC4-212, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 849 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-212ENST00000495497 GREB1Q4ZG55 1949 aa20.48■□□□□ 0.87
HDAC4-212ENST00000495497 A0A1W2PQH9 124 aa20.47■□□□□ 0.87
HDAC4-212ENST00000495497 FAM170AA1A519 330 aa20.47■□□□□ 0.87
HDAC4-212ENST00000495497 NARSO43776 548 aaKnown RBP20.47■□□□□ 0.87
HDAC4-212ENST00000495497 ZDHHC11BP0C7U3 371 aa20.47■□□□□ 0.87
HDAC4-212ENST00000495497 DDX6P26196 483 aaKnown RBP eCLIP20.47■□□□□ 0.87
HDAC4-212ENST00000495497 PBX1P40424 430 aa20.47■□□□□ 0.87
HDAC4-212ENST00000495497 STAT1P42224 750 aa20.47■□□□□ 0.87
HDAC4-212ENST00000495497 BPIFB4P59827 614 aa20.47■□□□□ 0.87
HDAC4-212ENST00000495497 ADIGQ0VDE8 80 aa20.47■□□□□ 0.87
HDAC4-212ENST00000495497 NOP9Q86U38 636 aaKnown RBP20.47■□□□□ 0.87
HDAC4-212ENST00000495497 SLC44A3Q8N4M1 653 aa20.47■□□□□ 0.87
HDAC4-212ENST00000495497 WDTC1Q8N5D0 677 aa20.47■□□□□ 0.87
HDAC4-212ENST00000495497 PDZD8Q8NEN9 1154 aa20.47■□□□□ 0.87
HDAC4-212ENST00000495497 OVCA2Q8WZ82 227 aa20.47■□□□□ 0.87
HDAC4-212ENST00000495497 ULBP1Q9BZM6 244 aa20.47■□□□□ 0.87
HDAC4-212ENST00000495497 NMUR1Q9HB89 426 aa20.47■□□□□ 0.87
HDAC4-212ENST00000495497 LRRC4Q9HBW1 653 aa20.47■□□□□ 0.87
HDAC4-212ENST00000495497 ZFP14Q9HCL3 533 aa20.47■□□□□ 0.87
HDAC4-212ENST00000495497 OSER1Q9NX31 292 aa20.47■□□□□ 0.87
HDAC4-212ENST00000495497 CCL26Q9Y258 94 aa20.47■□□□□ 0.87
HDAC4-212ENST00000495497 DAAM1Q9Y4D1 1078 aa20.47■□□□□ 0.87
HDAC4-212ENST00000495497 TNFRSF10AO00220 468 aa20.46■□□□□ 0.87
HDAC4-212ENST00000495497 KRT9P35527 623 aa20.46■□□□□ 0.87
HDAC4-212ENST00000495497 AVPR1AP37288 418 aa20.46■□□□□ 0.87
HDAC4-212ENST00000495497 PPP3CCP48454 512 aa20.46■□□□□ 0.87
HDAC4-212ENST00000495497 ARID5AQ03989 594 aa20.46■□□□□ 0.87
HDAC4-212ENST00000495497 GRM2Q14416 872 aa20.46■□□□□ 0.87
HDAC4-212ENST00000495497 SMYD5Q6GMV2 418 aa20.46■□□□□ 0.87
HDAC4-212ENST00000495497 SLC20A1Q8WUM9 679 aa20.46■□□□□ 0.87
HDAC4-212ENST00000495497 KCTD13Q8WZ19 329 aa20.46■□□□□ 0.87
HDAC4-212ENST00000495497 BAP1Q92560 729 aa20.46■□□□□ 0.87
HDAC4-212ENST00000495497 LRRC3BQ96PB8 259 aa20.46■□□□□ 0.87
HDAC4-212ENST00000495497 RNF38Q9H0F5 515 aa20.46■□□□□ 0.87
HDAC4-212ENST00000495497 CCSER2Q9H7U1 834 aa20.46■□□□□ 0.87
HDAC4-212ENST00000495497 TRPV4Q9HBA0 871 aa20.46■□□□□ 0.87
HDAC4-212ENST00000495497 PCDHGC3Q9UN70 934 aa20.46■□□□□ 0.87
HDAC4-212ENST00000495497 MYH10P35580 1976 aa20.46■□□□□ 0.87
HDAC4-212ENST00000495497 TRAV19A0A0A6YYK7 116 aa20.45■□□□□ 0.86
HDAC4-212ENST00000495497 HEPACAM2A8MVW5 462 aa20.45■□□□□ 0.86
HDAC4-212ENST00000495497 AP5Z1O43299 807 aa20.45■□□□□ 0.86
HDAC4-212ENST00000495497 ECI2O75521 394 aa20.45■□□□□ 0.86
HDAC4-212ENST00000495497 ZBED1O96006 694 aa20.45■□□□□ 0.86
HDAC4-212ENST00000495497 HDCP19113 662 aa20.45■□□□□ 0.86
HDAC4-212ENST00000495497 PDE6CP51160 858 aa20.45■□□□□ 0.86
HDAC4-212ENST00000495497 PLCB2Q00722 1185 aa20.45■□□□□ 0.86
HDAC4-212ENST00000495497 TDGQ13569 410 aa20.45■□□□□ 0.86
HDAC4-212ENST00000495497 VITQ6UXI7 678 aa20.45■□□□□ 0.86
HDAC4-212ENST00000495497 CCDC186Q7Z3E2 898 aa20.45■□□□□ 0.86
HDAC4-212ENST00000495497 SCD5Q86SK9 330 aa20.45■□□□□ 0.86
HDAC4-212ENST00000495497 TTC16Q8NEE8 873 aa20.45■□□□□ 0.86
HDAC4-212ENST00000495497 EPS8L1Q8TE68 723 aa20.45■□□□□ 0.86
HDAC4-212ENST00000495497 CLEC4CQ8WTT0 213 aa20.45■□□□□ 0.86
HDAC4-212ENST00000495497 DDX1Q92499 740 aaKnown RBP20.45■□□□□ 0.86
HDAC4-212ENST00000495497 USP13Q92995 863 aaPredicted RBP20.45■□□□□ 0.86
HDAC4-212ENST00000495497 NXPE3Q969Y0 559 aa20.45■□□□□ 0.86
HDAC4-212ENST00000495497 ELSPBP1Q96BH3 223 aa20.45■□□□□ 0.86
HDAC4-212ENST00000495497 TTYH3Q9C0H2 523 aa20.45■□□□□ 0.86
HDAC4-212ENST00000495497 TLR8Q9NR97 1041 aaKnown RBP20.45■□□□□ 0.86
HDAC4-212ENST00000495497 ST7Q9NRC1 585 aa20.45■□□□□ 0.86
HDAC4-212ENST00000495497 NAGPAQ9UK23 515 aa20.45■□□□□ 0.86
HDAC4-212ENST00000495497 NUDT5Q9UKK9 219 aa20.45■□□□□ 0.86
HDAC4-212ENST00000495497 SORCS3Q9UPU3 1222 aa20.45■□□□□ 0.86
HDAC4-212ENST00000495497 PATJQ8NI35 1801 aa20.44■□□□□ 0.86
HDAC4-212ENST00000495497 DPYSL4O14531 572 aa20.44■□□□□ 0.86
HDAC4-212ENST00000495497 TBX18O95935 607 aa20.44■□□□□ 0.86
HDAC4-212ENST00000495497 OAS1P00973 400 aaKnown RBP20.44■□□□□ 0.86
HDAC4-212ENST00000495497 CKMP06732 381 aa20.44■□□□□ 0.86
HDAC4-212ENST00000495497 MMEP08473 750 aa20.44■□□□□ 0.86
HDAC4-212ENST00000495497 MEA1Q16626 185 aa20.44■□□□□ 0.86
HDAC4-212ENST00000495497 HECTD3Q5T447 861 aa20.44■□□□□ 0.86
HDAC4-212ENST00000495497 SNX30Q5VWJ9 437 aa20.44■□□□□ 0.86
HDAC4-212ENST00000495497 BHLHA9Q7RTU4 235 aa20.44■□□□□ 0.86
HDAC4-212ENST00000495497 SIX6OS1Q8N1H7 587 aa20.44■□□□□ 0.86
HDAC4-212ENST00000495497 C1orf131Q8NDD1 294 aaKnown RBP20.44■□□□□ 0.86
HDAC4-212ENST00000495497 RIN3Q8TB24 985 aa20.44■□□□□ 0.86
HDAC4-212ENST00000495497 HSFY1Q96LI6 401 aa20.44■□□□□ 0.86
HDAC4-212ENST00000495497 MIS12Q9H081 205 aa20.44■□□□□ 0.86
HDAC4-212ENST00000495497 PDCL3Q9H2J4 239 aa20.44■□□□□ 0.86
HDAC4-212ENST00000495497 TJP2Q9UDY2 1190 aa20.44■□□□□ 0.86
HDAC4-212ENST00000495497 NOCTQ9UK39 431 aaKnown RBP20.44■□□□□ 0.86
HDAC4-212ENST00000495497 OBSL1O75147 1896 aa20.43■□□□□ 0.86
HDAC4-212ENST00000495497 LRRC53A6NM62 1247 aa20.43■□□□□ 0.86
HDAC4-212ENST00000495497 SOBPA7XYQ1 873 aa20.43■□□□□ 0.86
HDAC4-212ENST00000495497 DLL1O00548 723 aa20.43■□□□□ 0.86
HDAC4-212ENST00000495497 COCHO43405 550 aa20.43■□□□□ 0.86
HDAC4-212ENST00000495497 DCXO43602 365 aa20.43■□□□□ 0.86
HDAC4-212ENST00000495497 CHRNB2P17787 502 aa20.43■□□□□ 0.86
HDAC4-212ENST00000495497 WEE1P30291 646 aa20.43■□□□□ 0.86
HDAC4-212ENST00000495497 PM20D1Q6GTS8 502 aa20.43■□□□□ 0.86
HDAC4-212ENST00000495497 SLC4A5Q9BY07 1137 aa20.43■□□□□ 0.86
HDAC4-212ENST00000495497 LHX5Q9H2C1 402 aa20.43■□□□□ 0.86
HDAC4-212ENST00000495497 TDP1Q9NUW8 608 aa20.43■□□□□ 0.86
HDAC4-212ENST00000495497 ZMYM5Q9UJ78 669 aa20.43■□□□□ 0.86
HDAC4-212ENST00000495497 MUC3AQ02505 3323 aa20.43■□□□□ 0.86
HDAC4-212ENST00000495497 ZNF638Q14966 1978 aaKnown RBP20.43■□□□□ 0.86
HDAC4-212ENST00000495497 YJEFN3A6XGL0 299 aa20.42■□□□□ 0.86
HDAC4-212ENST00000495497 E7ENQ6 273 aa20.42■□□□□ 0.86
HDAC4-212ENST00000495497 MDM4O15151 490 aa20.42■□□□□ 0.86
HDAC4-212ENST00000495497 CBFA2T2O43439 604 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms