RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 SLITRK1Q96PX8 696 aa10.18□□□□□ -0.78
MSH5-218ENST00000494646 TWNKQ96RR1 684 aa10.18□□□□□ -0.78
MSH5-218ENST00000494646 SMOQ99835 787 aa10.18□□□□□ -0.78
MSH5-218ENST00000494646 APOBEC3GQ9HC16 384 aaKnown RBP10.18□□□□□ -0.78
MSH5-218ENST00000494646 FAM49BQ9NUQ9 324 aa10.18□□□□□ -0.78
MSH5-218ENST00000494646 CFAP97Q9P2B7 532 aa10.18□□□□□ -0.78
MSH5-218ENST00000494646 RAB23Q9ULC3 237 aa10.18□□□□□ -0.78
MSH5-218ENST00000494646 SLC8A2Q9UPR5 921 aa10.18□□□□□ -0.78
MSH5-218ENST00000494646 ATP8B3O60423 1300 aa10.17□□□□□ -0.78
MSH5-218ENST00000494646 MAPK13O15264 365 aa10.17□□□□□ -0.78
MSH5-218ENST00000494646 ATG13O75143 517 aa10.17□□□□□ -0.78
MSH5-218ENST00000494646 NFATC1O95644 943 aa10.17□□□□□ -0.78
MSH5-218ENST00000494646 PRCPP42785 496 aa10.17□□□□□ -0.78
MSH5-218ENST00000494646 ASPAP45381 313 aa10.17□□□□□ -0.78
MSH5-218ENST00000494646 PGFP49763 221 aa10.17□□□□□ -0.78
MSH5-218ENST00000494646 PDE6CP51160 858 aa10.17□□□□□ -0.78
MSH5-218ENST00000494646 SLC5A3P53794 718 aa10.17□□□□□ -0.78
MSH5-218ENST00000494646 SLC7A9P82251 487 aa10.17□□□□□ -0.78
MSH5-218ENST00000494646 SPEM2Q0P670 501 aa10.17□□□□□ -0.78
MSH5-218ENST00000494646 NFIL3Q16649 462 aa10.17□□□□□ -0.78
MSH5-218ENST00000494646 RSPO4Q2I0M5 234 aaPredicted RBP10.17□□□□□ -0.78
MSH5-218ENST00000494646 ZNF394Q53GI3 561 aa10.17□□□□□ -0.78
MSH5-218ENST00000494646 CEP68Q76N32 757 aa10.17□□□□□ -0.78
MSH5-218ENST00000494646 FMR1NBQ8N0W7 255 aaPredicted RBP10.17□□□□□ -0.78
MSH5-218ENST00000494646 ZMIZ2Q8NF64 920 aa10.17□□□□□ -0.78
MSH5-218ENST00000494646 RPLP0P6Q8NHW5 317 aa10.17□□□□□ -0.78
MSH5-218ENST00000494646 TAF4BQ92750 862 aa10.17□□□□□ -0.78
MSH5-218ENST00000494646 EZH1Q92800 747 aaPredicted RBP10.17□□□□□ -0.78
MSH5-218ENST00000494646 SECISBP2LQ93073 1101 aaKnown RBP10.17□□□□□ -0.78
MSH5-218ENST00000494646 WBP2Q969T9 261 aa10.17□□□□□ -0.78
MSH5-218ENST00000494646 CYFIP2Q96F07 1278 aa10.17□□□□□ -0.78
MSH5-218ENST00000494646 SMARCD1Q96GM5 515 aa10.17□□□□□ -0.78
MSH5-218ENST00000494646 CCDC34Q96HJ3 373 aa10.17□□□□□ -0.78
MSH5-218ENST00000494646 CCSER2Q9H7U1 834 aa10.17□□□□□ -0.78
MSH5-218ENST00000494646 DMAP1Q9NPF5 467 aaPredicted RBP10.17□□□□□ -0.78
MSH5-218ENST00000494646 USP18Q9UMW8 372 aa10.17□□□□□ -0.78
MSH5-218ENST00000494646 ABCA7Q8IZY2 2146 aa10.16□□□□□ -0.78
MSH5-218ENST00000494646 CEP250Q9BV73 2442 aa10.16□□□□□ -0.78
MSH5-218ENST00000494646 AXIN1O15169 862 aa10.16□□□□□ -0.78
MSH5-218ENST00000494646 CETN3O15182 167 aa10.16□□□□□ -0.78
MSH5-218ENST00000494646 COCHO43405 550 aa10.16□□□□□ -0.78
MSH5-218ENST00000494646 PAPSS2O95340 614 aaPredicted RBP10.16□□□□□ -0.78
MSH5-218ENST00000494646 TBX18O95935 607 aa10.16□□□□□ -0.78
MSH5-218ENST00000494646 OAS1P00973 400 aaKnown RBP10.16□□□□□ -0.78
MSH5-218ENST00000494646 IRF1P10914 325 aa10.16□□□□□ -0.78
MSH5-218ENST00000494646 TCF3P15923 654 aa10.16□□□□□ -0.78
MSH5-218ENST00000494646 PFKLP17858 780 aa10.16□□□□□ -0.78
MSH5-218ENST00000494646 OPRD1P41143 372 aa10.16□□□□□ -0.78
MSH5-218ENST00000494646 SEC13P55735 322 aa10.16□□□□□ -0.78
MSH5-218ENST00000494646 NUCB2P80303 420 aa10.16□□□□□ -0.78
MSH5-218ENST00000494646 DHCR24Q15392 516 aa10.16□□□□□ -0.78
MSH5-218ENST00000494646 C2orf27AQ580R0 203 aa10.16□□□□□ -0.78
MSH5-218ENST00000494646 HECTD3Q5T447 861 aa10.16□□□□□ -0.78
MSH5-218ENST00000494646 KRT39Q6A163 491 aa10.16□□□□□ -0.78
MSH5-218ENST00000494646 ANKRD40Q6AI12 368 aa10.16□□□□□ -0.78
MSH5-218ENST00000494646 RHBDF2Q6PJF5 856 aa10.16□□□□□ -0.78
MSH5-218ENST00000494646 UNC93AQ86WB7 457 aa10.16□□□□□ -0.78
MSH5-218ENST00000494646 CCDC150Q8NCX0 1101 aa10.16□□□□□ -0.78
MSH5-218ENST00000494646 ENGASEQ8NFI3 743 aa10.16□□□□□ -0.78
MSH5-218ENST00000494646 WHAMMQ8TF30 809 aa10.16□□□□□ -0.78
MSH5-218ENST00000494646 SEMA4DQ92854 862 aa10.16□□□□□ -0.78
MSH5-218ENST00000494646 TATDN2Q93075 761 aa10.16□□□□□ -0.78
MSH5-218ENST00000494646 EXOC4Q96A65 974 aa10.16□□□□□ -0.78
MSH5-218ENST00000494646 HHIPQ96QV1 700 aa10.16□□□□□ -0.78
MSH5-218ENST00000494646 NT5C1AQ9BXI3 368 aa10.16□□□□□ -0.78
MSH5-218ENST00000494646 IMPG2Q9BZV3 1241 aa10.16□□□□□ -0.78
MSH5-218ENST00000494646 TMEM8AQ9HCN3 771 aa10.16□□□□□ -0.78
MSH5-218ENST00000494646 PARD6AQ9NPB6 346 aa10.16□□□□□ -0.78
MSH5-218ENST00000494646 KRT82Q9NSB4 513 aa10.16□□□□□ -0.78
MSH5-218ENST00000494646 IL37Q9NZH6 218 aa10.16□□□□□ -0.78
MSH5-218ENST00000494646 GMIPQ9P107 970 aa10.16□□□□□ -0.78
MSH5-218ENST00000494646 GMEB2Q9UKD1 530 aa10.16□□□□□ -0.78
MSH5-218ENST00000494646 NUDT5Q9UKK9 219 aa10.16□□□□□ -0.78
MSH5-218ENST00000494646 LAMA1P25391 3075 aa10.16□□□□□ -0.78
MSH5-218ENST00000494646 KIAA1549LQ6ZVL6 1849 aa10.16□□□□□ -0.78
MSH5-218ENST00000494646 THADAQ6YHU6 1953 aa10.15□□□□□ -0.78
MSH5-218ENST00000494646 K7EQS6 105 aa10.15□□□□□ -0.78
MSH5-218ENST00000494646 OLFM2O95897 454 aa10.15□□□□□ -0.78
MSH5-218ENST00000494646 CYP17A1P05093 508 aa10.15□□□□□ -0.78
MSH5-218ENST00000494646 FAM200BP0CF97 657 aa10.15□□□□□ -0.78
MSH5-218ENST00000494646 EPB41P11171 864 aaKnown RBP10.15□□□□□ -0.78
MSH5-218ENST00000494646 ACO1P21399 889 aaKnown RBP10.15□□□□□ -0.78
MSH5-218ENST00000494646 TGM1P22735 817 aa10.15□□□□□ -0.78
MSH5-218ENST00000494646 CNR2P34972 360 aa10.15□□□□□ -0.78
MSH5-218ENST00000494646 ZCWPW2Q504Y3 356 aa10.15□□□□□ -0.78
MSH5-218ENST00000494646 PPP1R26Q5T8A7 1209 aaPredicted RBP10.15□□□□□ -0.78
MSH5-218ENST00000494646 ZNF658Q5TYW1 1059 aaPredicted RBP10.15□□□□□ -0.78
MSH5-218ENST00000494646 TCERG1LQ5VWI1 586 aa10.15□□□□□ -0.78
MSH5-218ENST00000494646 GPRIN1Q7Z2K8 1008 aa10.15□□□□□ -0.78
MSH5-218ENST00000494646 WDR5BQ86VZ2 330 aa10.15□□□□□ -0.78
MSH5-218ENST00000494646 SFTPA1Q8IWL2 248 aa10.15□□□□□ -0.78
MSH5-218ENST00000494646 NAT16Q8N8M0 369 aa10.15□□□□□ -0.78
MSH5-218ENST00000494646 PDZD8Q8NEN9 1154 aa10.15□□□□□ -0.78
MSH5-218ENST00000494646 OVCA2Q8WZ82 227 aa10.15□□□□□ -0.78
MSH5-218ENST00000494646 SMARCE1Q969G3 411 aa10.15□□□□□ -0.78
MSH5-218ENST00000494646 HEXIM2Q96MH2 286 aaKnown RBP10.15□□□□□ -0.78
MSH5-218ENST00000494646 HNRNPABQ99729 332 aaKnown RBP10.15□□□□□ -0.78
MSH5-218ENST00000494646 NACA2Q9H009 215 aa10.15□□□□□ -0.78
MSH5-218ENST00000494646 CYP3A43Q9HB55 503 aa10.15□□□□□ -0.78
MSH5-218ENST00000494646 CSNK1G1Q9HCP0 422 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms