RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 PRPF6O94906 941 aaKnown RBP12.53□□□□□ -0.4
CSNK1E-212ENST00000494610 CKMP06732 381 aa12.53□□□□□ -0.4
CSNK1E-212ENST00000494610 CDK11BP21127 795 aaKnown RBP12.53□□□□□ -0.4
CSNK1E-212ENST00000494610 EEF1GP26641 437 aaKnown RBP12.53□□□□□ -0.4
CSNK1E-212ENST00000494610 POLR2BP30876 1174 aaKnown RBP12.53□□□□□ -0.4
CSNK1E-212ENST00000494610 OPRD1P41143 372 aa12.53□□□□□ -0.4
CSNK1E-212ENST00000494610 SLC6A11P48066 632 aa12.53□□□□□ -0.4
CSNK1E-212ENST00000494610 DHPSP49366 369 aaPredicted RBP12.53□□□□□ -0.4
CSNK1E-212ENST00000494610 PDGFRLQ15198 375 aa12.53□□□□□ -0.4
CSNK1E-212ENST00000494610 ZCWPW2Q504Y3 356 aa12.53□□□□□ -0.4
CSNK1E-212ENST00000494610 EMC10Q5UCC4 262 aa12.53□□□□□ -0.4
CSNK1E-212ENST00000494610 PMS2CLQ68D20 193 aa12.53□□□□□ -0.4
CSNK1E-212ENST00000494610 TTI2Q6NXR4 508 aa12.53□□□□□ -0.4
CSNK1E-212ENST00000494610 TMEM92Q6UXU6 159 aa12.53□□□□□ -0.4
CSNK1E-212ENST00000494610 NELFCDQ8IXH7 590 aa12.53□□□□□ -0.4
CSNK1E-212ENST00000494610 C12orf56Q8IXR9 622 aa12.53□□□□□ -0.4
CSNK1E-212ENST00000494610 CPA6Q8N4T0 437 aa12.53□□□□□ -0.4
CSNK1E-212ENST00000494610 MDGA1Q8NFP4 955 aa12.53□□□□□ -0.4
CSNK1E-212ENST00000494610 TSTD1Q8NFU3 115 aa12.53□□□□□ -0.4
CSNK1E-212ENST00000494610 SH3RF2Q8TEC5 729 aa12.53□□□□□ -0.4
CSNK1E-212ENST00000494610 PIGKQ92643 395 aa12.53□□□□□ -0.4
CSNK1E-212ENST00000494610 HPS3Q969F9 1004 aa12.53□□□□□ -0.4
CSNK1E-212ENST00000494610 ERLEC1Q96DZ1 483 aa12.53□□□□□ -0.4
CSNK1E-212ENST00000494610 SAAL1Q96ER3 474 aa12.53□□□□□ -0.4
CSNK1E-212ENST00000494610 PKMYT1Q99640 499 aa12.53□□□□□ -0.4
CSNK1E-212ENST00000494610 STRA6Q9BX79 667 aa12.53□□□□□ -0.4
CSNK1E-212ENST00000494610 ADAM33Q9BZ11 813 aa12.53□□□□□ -0.4
CSNK1E-212ENST00000494610 TMEM74BQ9NUR3 256 aa12.53□□□□□ -0.4
CSNK1E-212ENST00000494610 EBF1Q9UH73 591 aa12.53□□□□□ -0.4
CSNK1E-212ENST00000494610 AGO2Q9UKV8 859 aaKnown RBP12.53□□□□□ -0.4
CSNK1E-212ENST00000494610 DSEQ9UL01 958 aa12.53□□□□□ -0.4
CSNK1E-212ENST00000494610 ATXN2Q99700 1313 aaKnown RBP12.53□□□□□ -0.4
CSNK1E-212ENST00000494610 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.52□□□□□ -0.41
CSNK1E-212ENST00000494610 SRRM3A6NNA2 597 aaPredicted RBP12.52□□□□□ -0.41
CSNK1E-212ENST00000494610 SLC16A3O15427 465 aaKnown RBP12.52□□□□□ -0.41
CSNK1E-212ENST00000494610 HYAL3O43820 417 aaPredicted RBP12.52□□□□□ -0.41
CSNK1E-212ENST00000494610 ITGB3P05106 788 aa12.52□□□□□ -0.41
CSNK1E-212ENST00000494610 PTGER3P43115 390 aa12.52□□□□□ -0.41
CSNK1E-212ENST00000494610 MAPK8P45983 427 aa12.52□□□□□ -0.41
CSNK1E-212ENST00000494610 IFNAR2P48551 515 aa12.52□□□□□ -0.41
CSNK1E-212ENST00000494610 CASP5P51878 434 aa12.52□□□□□ -0.41
CSNK1E-212ENST00000494610 STX17P56962 302 aa12.52□□□□□ -0.41
CSNK1E-212ENST00000494610 USP46P62068 366 aa12.52□□□□□ -0.41
CSNK1E-212ENST00000494610 USP4Q13107 963 aa12.52□□□□□ -0.41
CSNK1E-212ENST00000494610 NCAPHQ15003 741 aa12.52□□□□□ -0.41
CSNK1E-212ENST00000494610 KYAT1Q16773 422 aa12.52□□□□□ -0.41
CSNK1E-212ENST00000494610 SLFN12LQ6IEE8 588 aa12.52□□□□□ -0.41
CSNK1E-212ENST00000494610 SARM1Q6SZW1 724 aa12.52□□□□□ -0.41
CSNK1E-212ENST00000494610 SCN4BQ8IWT1 228 aa12.52□□□□□ -0.41
CSNK1E-212ENST00000494610 CD302Q8IX05 232 aa12.52□□□□□ -0.41
CSNK1E-212ENST00000494610 TMEFF1Q8IYR6 380 aa12.52□□□□□ -0.41
CSNK1E-212ENST00000494610 DCP1BQ8IZD4 617 aaKnown RBP12.52□□□□□ -0.41
CSNK1E-212ENST00000494610 DEFB119Q8N690 84 aa12.52□□□□□ -0.41
CSNK1E-212ENST00000494610 KDF1Q8NAX2 398 aaPredicted RBP12.52□□□□□ -0.41
CSNK1E-212ENST00000494610 USP33Q8TEY7 942 aa12.52□□□□□ -0.41
CSNK1E-212ENST00000494610 C2orf15Q8WU43 125 aaKnown RBP12.52□□□□□ -0.41
CSNK1E-212ENST00000494610 TMEM174Q8WUU8 243 aa12.52□□□□□ -0.41
CSNK1E-212ENST00000494610 GATA6Q92908 595 aa12.52□□□□□ -0.41
CSNK1E-212ENST00000494610 KCTD10Q9H3F6 313 aa12.52□□□□□ -0.41
CSNK1E-212ENST00000494610 ASB7Q9H672 318 aa12.52□□□□□ -0.41
CSNK1E-212ENST00000494610 TMEM9BQ9NQ34 198 aa12.52□□□□□ -0.41
CSNK1E-212ENST00000494610 DDX43Q9NXZ2 648 aaKnown RBP12.52□□□□□ -0.41
CSNK1E-212ENST00000494610 GCNT4Q9P109 453 aa12.52□□□□□ -0.41
CSNK1E-212ENST00000494610 AGAP1Q9UPQ3 857 aa12.52□□□□□ -0.41
CSNK1E-212ENST00000494610 DERAQ9Y315 318 aa12.52□□□□□ -0.41
CSNK1E-212ENST00000494610 IGSF10Q6WRI0 2623 aa12.52□□□□□ -0.41
CSNK1E-212ENST00000494610 TNRC6BQ9UPQ9 1833 aaKnown RBP12.51□□□□□ -0.41
CSNK1E-212ENST00000494610 SPAARA0A1B0GVQ0 90 aa12.51□□□□□ -0.41
CSNK1E-212ENST00000494610 GOLGA8IPA6NC78 632 aa12.51□□□□□ -0.41
CSNK1E-212ENST00000494610 TRIM49BA6NDI0 452 aa12.51□□□□□ -0.41
CSNK1E-212ENST00000494610 PCNX2A6NKB5 2137 aa12.51□□□□□ -0.41
CSNK1E-212ENST00000494610 GOLGA8JA6NMD2 632 aa12.51□□□□□ -0.41
CSNK1E-212ENST00000494610 KHNYNO15037 678 aaKnown RBP12.51□□□□□ -0.41
CSNK1E-212ENST00000494610 NOL4O94818 638 aa12.51□□□□□ -0.41
CSNK1E-212ENST00000494610 CSH1P0DML2 217 aa12.51□□□□□ -0.41
CSNK1E-212ENST00000494610 CSH2P0DML3 217 aa12.51□□□□□ -0.41
CSNK1E-212ENST00000494610 EPB41P11171 864 aaKnown RBP12.51□□□□□ -0.41
CSNK1E-212ENST00000494610 NR2F2P24468 414 aa12.51□□□□□ -0.41
CSNK1E-212ENST00000494610 DDX6P26196 483 aaKnown RBP eCLIP12.51□□□□□ -0.41
CSNK1E-212ENST00000494610 PI4KAP42356 2102 aa12.51□□□□□ -0.41
CSNK1E-212ENST00000494610 PSMC1P62191 440 aaKnown RBP12.51□□□□□ -0.41
CSNK1E-212ENST00000494610 TFAMQ00059 246 aaKnown RBP12.51□□□□□ -0.41
CSNK1E-212ENST00000494610 ZNF268Q14587 947 aaPredicted RBP12.51□□□□□ -0.41
CSNK1E-212ENST00000494610 FILIP1LQ4L180 1135 aa12.51□□□□□ -0.41
CSNK1E-212ENST00000494610 CDKAL1Q5VV42 579 aa12.51□□□□□ -0.41
CSNK1E-212ENST00000494610 DAB2IPQ5VWQ8 1189 aa12.51□□□□□ -0.41
CSNK1E-212ENST00000494610 LMBRD2Q68DH5 695 aaPredicted RBP12.51□□□□□ -0.41
CSNK1E-212ENST00000494610 CYP2U1Q7Z449 544 aa12.51□□□□□ -0.41
CSNK1E-212ENST00000494610 C12orf40Q86WS4 652 aa12.51□□□□□ -0.41
CSNK1E-212ENST00000494610 SLC9A9Q8IVB4 645 aa12.51□□□□□ -0.41
CSNK1E-212ENST00000494610 ZC3H3Q8IXZ2 948 aaKnown RBP12.51□□□□□ -0.41
CSNK1E-212ENST00000494610 ALLCQ8N6M5 410 aa12.51□□□□□ -0.41
CSNK1E-212ENST00000494610 C1orf127Q8N9H9 656 aa12.51□□□□□ -0.41
CSNK1E-212ENST00000494610 OR2I1PQ8NGU4 316 aa12.51□□□□□ -0.41
CSNK1E-212ENST00000494610 CXorf38Q8TB03 319 aa12.51□□□□□ -0.41
CSNK1E-212ENST00000494610 FNBP1Q96RU3 617 aa12.51□□□□□ -0.41
CSNK1E-212ENST00000494610 FAM213AQ9BRX8 229 aa12.51□□□□□ -0.41
CSNK1E-212ENST00000494610 FGFBP2Q9BYJ0 223 aa12.51□□□□□ -0.41
CSNK1E-212ENST00000494610 KIF9Q9HAQ2 790 aa12.51□□□□□ -0.41
CSNK1E-212ENST00000494610 METTL14Q9HCE5 456 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms