RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 RTP3Q9BQQ7 232 aa17.3■□□□□ 0.36
ATG4B-225ENST00000494465 SYT15Q9BQS2 421 aa17.3■□□□□ 0.36
ATG4B-225ENST00000494465 NGRNQ9NPE2 291 aaKnown RBP17.3■□□□□ 0.36
ATG4B-225ENST00000494465 UBN1Q9NPG3 1134 aa17.3■□□□□ 0.36
ATG4B-225ENST00000494465 AAASQ9NRG9 546 aa17.3■□□□□ 0.36
ATG4B-225ENST00000494465 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.3■□□□□ 0.36
ATG4B-225ENST00000494465 MTRF1LQ9UGC7 380 aaKnown RBP17.3■□□□□ 0.36
ATG4B-225ENST00000494465 PTCH2Q9Y6C5 1203 aa17.3■□□□□ 0.36
ATG4B-225ENST00000494465 MYBPHLA2RUH7 354 aa17.3■□□□□ 0.36
ATG4B-225ENST00000494465 C9IYK1 514 aa17.3■□□□□ 0.36
ATG4B-225ENST00000494465 I3L4J1 428 aa17.3■□□□□ 0.36
ATG4B-225ENST00000494465 PRPSAP2O60256 369 aa17.3■□□□□ 0.36
ATG4B-225ENST00000494465 ZNF844Q08AG5 666 aa17.3■□□□□ 0.36
ATG4B-225ENST00000494465 CALCOCO2Q13137 446 aa17.3■□□□□ 0.36
ATG4B-225ENST00000494465 PHF24Q9UPV7 400 aa17.3■□□□□ 0.36
ATG4B-225ENST00000494465 INPP5FQ9Y2H2 1132 aa17.3■□□□□ 0.36
ATG4B-225ENST00000494465 ITGAVP06756 1048 aa17.29■□□□□ 0.36
ATG4B-225ENST00000494465 ATF2P15336 505 aa17.29■□□□□ 0.36
ATG4B-225ENST00000494465 VPS41P49754 854 aa17.29■□□□□ 0.36
ATG4B-225ENST00000494465 PMS2P54278 862 aa17.29■□□□□ 0.36
ATG4B-225ENST00000494465 DYNLT1P63172 113 aa17.29■□□□□ 0.36
ATG4B-225ENST00000494465 LMNB2Q03252 620 aa17.29■□□□□ 0.36
ATG4B-225ENST00000494465 ADIGQ0VDE8 80 aa17.29■□□□□ 0.36
ATG4B-225ENST00000494465 MMRN1Q13201 1228 aa17.29■□□□□ 0.36
ATG4B-225ENST00000494465 TUSC3Q13454 348 aa17.29■□□□□ 0.36
ATG4B-225ENST00000494465 DPYSL3Q14195 570 aa17.29■□□□□ 0.36
ATG4B-225ENST00000494465 PAN2Q504Q3 1202 aaKnown RBP17.29■□□□□ 0.36
ATG4B-225ENST00000494465 UBAP2Q5T6F2 1119 aaKnown RBP17.29■□□□□ 0.36
ATG4B-225ENST00000494465 ZNF365Q70YC5 407 aa17.29■□□□□ 0.36
ATG4B-225ENST00000494465 CCDC89Q8N998 374 aa17.29■□□□□ 0.36
ATG4B-225ENST00000494465 ACTL9Q8TC94 416 aa17.29■□□□□ 0.36
ATG4B-225ENST00000494465 KCTD13Q8WZ19 329 aa17.29■□□□□ 0.36
ATG4B-225ENST00000494465 PABPC3Q9H361 631 aaKnown RBP17.29■□□□□ 0.36
ATG4B-225ENST00000494465 TMEM30AQ9NV96 361 aa17.29■□□□□ 0.36
ATG4B-225ENST00000494465 ARVCFO00192 962 aa17.29■□□□□ 0.36
ATG4B-225ENST00000494465 B3GAT3O94766 335 aa17.29■□□□□ 0.36
ATG4B-225ENST00000494465 ADCY8P40145 1251 aa17.29■□□□□ 0.36
ATG4B-225ENST00000494465 ITGA8P53708 1063 aa17.29■□□□□ 0.36
ATG4B-225ENST00000494465 CDH6P55285 790 aa17.29■□□□□ 0.36
ATG4B-225ENST00000494465 PRMT2P55345 433 aa17.29■□□□□ 0.36
ATG4B-225ENST00000494465 OTUD4Q01804 1114 aaKnown RBP17.29■□□□□ 0.36
ATG4B-225ENST00000494465 GOLGA6L1Q8N7Z2 621 aa17.29■□□□□ 0.36
ATG4B-225ENST00000494465 TEKT4Q8WW24 435 aa17.29■□□□□ 0.36
ATG4B-225ENST00000494465 NDRG1Q92597 394 aaKnown RBP17.29■□□□□ 0.36
ATG4B-225ENST00000494465 PCED1BQ96HM7 432 aa17.29■□□□□ 0.36
ATG4B-225ENST00000494465 DDX23Q9BUQ8 820 aaKnown RBP17.29■□□□□ 0.36
ATG4B-225ENST00000494465 CALN1Q9BXU9 219 aa17.29■□□□□ 0.36
ATG4B-225ENST00000494465 CDH9Q9ULB4 789 aa17.29■□□□□ 0.36
ATG4B-225ENST00000494465 ZNF148Q9UQR1 794 aa17.29■□□□□ 0.36
ATG4B-225ENST00000494465 GOLGA6CA6NDK9 693 aa17.28■□□□□ 0.36
ATG4B-225ENST00000494465 GOLGA6DP0CG33 693 aa17.28■□□□□ 0.36
ATG4B-225ENST00000494465 IL4RP24394 825 aa17.28■□□□□ 0.36
ATG4B-225ENST00000494465 BRCC3P46736 316 aa17.28■□□□□ 0.36
ATG4B-225ENST00000494465 BOLA3Q53S33 107 aa17.28■□□□□ 0.36
ATG4B-225ENST00000494465 CEP85LQ5SZL2 805 aa17.28■□□□□ 0.36
ATG4B-225ENST00000494465 EXOC4Q96A65 974 aa17.28■□□□□ 0.36
ATG4B-225ENST00000494465 SEMA4AQ9H3S1 761 aa17.28■□□□□ 0.36
ATG4B-225ENST00000494465 LRRC4CQ9HCJ2 640 aa17.28■□□□□ 0.36
ATG4B-225ENST00000494465 KRT82Q9NSB4 513 aa17.28■□□□□ 0.36
ATG4B-225ENST00000494465 GOLGA6AQ9NYA3 693 aa17.28■□□□□ 0.36
ATG4B-225ENST00000494465 CALCOCO1Q9P1Z2 691 aa17.28■□□□□ 0.36
ATG4B-225ENST00000494465 B4GALT3O60512 393 aa17.28■□□□□ 0.36
ATG4B-225ENST00000494465 CYP11A1P05108 521 aa17.28■□□□□ 0.36
ATG4B-225ENST00000494465 ITGB1P05556 798 aa17.28■□□□□ 0.36
ATG4B-225ENST00000494465 ZSCAN5DPP0CG00 497 aa17.28■□□□□ 0.36
ATG4B-225ENST00000494465 PECAM1P16284 738 aaPredicted RBP17.28■□□□□ 0.36
ATG4B-225ENST00000494465 CHKAP35790 457 aa17.28■□□□□ 0.36
ATG4B-225ENST00000494465 ATXN1P54253 815 aaKnown RBP17.28■□□□□ 0.36
ATG4B-225ENST00000494465 CACNA2D1P54289 1103 aa17.28■□□□□ 0.36
ATG4B-225ENST00000494465 FAM189BP81408 668 aa17.28■□□□□ 0.36
ATG4B-225ENST00000494465 ZC3H12AQ5D1E8 599 aaKnown RBP17.28■□□□□ 0.36
ATG4B-225ENST00000494465 SCYL2Q6P3W7 929 aa17.28■□□□□ 0.36
ATG4B-225ENST00000494465 GSTA5Q7RTV2 222 aa17.28■□□□□ 0.36
ATG4B-225ENST00000494465 FAM35AQ86V20 835 aa17.28■□□□□ 0.36
ATG4B-225ENST00000494465 ZMIZ2Q8NF64 920 aa17.28■□□□□ 0.36
ATG4B-225ENST00000494465 TBCBQ99426 244 aa17.28■□□□□ 0.36
ATG4B-225ENST00000494465 SMOQ99835 787 aa17.28■□□□□ 0.36
ATG4B-225ENST00000494465 TMEM121Q9BTD3 319 aa17.28■□□□□ 0.36
ATG4B-225ENST00000494465 MED10Q9BTT4 135 aa17.28■□□□□ 0.36
ATG4B-225ENST00000494465 SNRNP25Q9BV90 132 aaKnown RBP17.28■□□□□ 0.36
ATG4B-225ENST00000494465 FRMD8P1Q9BZ68 369 aaPredicted RBP17.28■□□□□ 0.36
ATG4B-225ENST00000494465 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.28■□□□□ 0.368e-7■■□□□ 13.8
ATG4B-225ENST00000494465 ADAM7Q9H2U9 754 aa17.28■□□□□ 0.36
ATG4B-225ENST00000494465 GPATCH2LQ9NWQ4 482 aa17.28■□□□□ 0.36
ATG4B-225ENST00000494465 F8W810 466 aa17.27■□□□□ 0.36
ATG4B-225ENST00000494465 M0QZQ0 153 aa17.27■□□□□ 0.36
ATG4B-225ENST00000494465 FAM200BP0CF97 657 aa17.27■□□□□ 0.36
ATG4B-225ENST00000494465 ODC1P11926 461 aa17.27■□□□□ 0.36
ATG4B-225ENST00000494465 RARGP13631 454 aa17.27■□□□□ 0.36
ATG4B-225ENST00000494465 ETS1P14921 441 aa17.27■□□□□ 0.36
ATG4B-225ENST00000494465 NDUFV1P49821 464 aa17.27■□□□□ 0.36
ATG4B-225ENST00000494465 CDK7P50613 346 aa17.27■□□□□ 0.36
ATG4B-225ENST00000494465 MAP3K7CLP57077 242 aa17.27■□□□□ 0.36
ATG4B-225ENST00000494465 SLC8A3P57103 927 aa17.27■□□□□ 0.36
ATG4B-225ENST00000494465 CA9Q16790 459 aa17.27■□□□□ 0.36
ATG4B-225ENST00000494465 SLC24A5Q71RS6 500 aa17.27■□□□□ 0.36
ATG4B-225ENST00000494465 RFX6Q8HWS3 928 aa17.27■□□□□ 0.36
ATG4B-225ENST00000494465 TTC13Q8NBP0 860 aa17.27■□□□□ 0.36
ATG4B-225ENST00000494465 MYCBPAPQ8TBZ2 947 aa17.27■□□□□ 0.36
ATG4B-225ENST00000494465 SH3TC2Q8TF17 1288 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms