RNA–Protein interactions for RNA: ENST00000493991.5

COL2A1-208, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 3,756 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-208ENST00000493991 CCNG2Q16589 344 aa11.47□□□□□ -0.57
COL2A1-208ENST00000493991 EFHC2Q5JST6 749 aa11.47□□□□□ -0.57
COL2A1-208ENST00000493991 PPP1R26Q5T8A7 1209 aaPredicted RBP11.47□□□□□ -0.57
COL2A1-208ENST00000493991 CCHCR1Q8TD31 782 aa11.47□□□□□ -0.57
COL2A1-208ENST00000493991 PPP4R1Q8TF05 950 aa11.47□□□□□ -0.57
COL2A1-208ENST00000493991 PCYT2Q99447 389 aa11.47□□□□□ -0.57
COL2A1-208ENST00000493991 GPR88Q9GZN0 384 aa11.47□□□□□ -0.57
COL2A1-208ENST00000493991 STAP1Q9ULZ2 295 aa11.47□□□□□ -0.57
COL2A1-208ENST00000493991 MROH7Q68CQ1 1323 aa11.47□□□□□ -0.57
COL2A1-208ENST00000493991 LTBP4Q8N2S1 1624 aa11.47□□□□□ -0.57
COL2A1-208ENST00000493991 TRIM49D1C9J1S8 452 aa11.47□□□□□ -0.57
COL2A1-208ENST00000493991 PPP1R12AO14974 1030 aaPredicted RBP11.47□□□□□ -0.57
COL2A1-208ENST00000493991 TREHO43280 583 aa11.47□□□□□ -0.57
COL2A1-208ENST00000493991 PSTPIP1O43586 416 aa11.47□□□□□ -0.57
COL2A1-208ENST00000493991 SHOX2O60902 331 aaPredicted RBP11.47□□□□□ -0.57
COL2A1-208ENST00000493991 PFDN1O60925 122 aa11.47□□□□□ -0.57
COL2A1-208ENST00000493991 KRT37O76014 449 aa11.47□□□□□ -0.57
COL2A1-208ENST00000493991 VDRP11473 427 aa11.47□□□□□ -0.57
COL2A1-208ENST00000493991 ESRRAP11474 423 aaPredicted RBP11.47□□□□□ -0.57
COL2A1-208ENST00000493991 GNAT1P11488 350 aa11.47□□□□□ -0.57
COL2A1-208ENST00000493991 ELK3P41970 407 aa11.47□□□□□ -0.57
COL2A1-208ENST00000493991 TAF6P49848 677 aa11.47□□□□□ -0.57
COL2A1-208ENST00000493991 ATN1P54259 1190 aaPredicted RBP11.47□□□□□ -0.57
COL2A1-208ENST00000493991 EPHB1P54762 984 aa11.47□□□□□ -0.57
COL2A1-208ENST00000493991 PTK7Q13308 1070 aa11.47□□□□□ -0.57
COL2A1-208ENST00000493991 CCL14Q16627 93 aa11.47□□□□□ -0.57
COL2A1-208ENST00000493991 AGBL2Q5U5Z8 902 aa11.47□□□□□ -0.57
COL2A1-208ENST00000493991 WSCD1Q658N2 575 aa11.47□□□□□ -0.57
COL2A1-208ENST00000493991 TMEM154Q6P9G4 183 aa11.47□□□□□ -0.57
COL2A1-208ENST00000493991 CTU1Q7Z7A3 348 aaKnown RBP11.47□□□□□ -0.57
COL2A1-208ENST00000493991 BARX2Q9UMQ3 279 aaPredicted RBP11.47□□□□□ -0.57
COL2A1-208ENST00000493991 ARL2BPQ9Y2Y0 163 aa11.47□□□□□ -0.57
COL2A1-208ENST00000493991 PPP2R3BQ9Y5P8 575 aa11.47□□□□□ -0.57
COL2A1-208ENST00000493991 NCANO14594 1321 aa11.47□□□□□ -0.57
COL2A1-208ENST00000493991 NFASCO94856 1347 aa11.47□□□□□ -0.57
COL2A1-208ENST00000493991 SLX4Q8IY92 1834 aa11.47□□□□□ -0.57
COL2A1-208ENST00000493991 CBX6O95503 412 aa11.46□□□□□ -0.57
COL2A1-208ENST00000493991 TPH1P17752 444 aa11.46□□□□□ -0.57
COL2A1-208ENST00000493991 EIF4BP23588 611 aaKnown RBP11.46□□□□□ -0.57
COL2A1-208ENST00000493991 SERPINB6P35237 376 aa11.46□□□□□ -0.57
COL2A1-208ENST00000493991 TPI1P60174 286 aa11.46□□□□□ -0.57
COL2A1-208ENST00000493991 PPIL2Q13356 520 aa11.46□□□□□ -0.57
COL2A1-208ENST00000493991 STAT4Q14765 748 aa11.46□□□□□ -0.57
COL2A1-208ENST00000493991 CCDC142Q17RM4 750 aa11.46□□□□□ -0.57
COL2A1-208ENST00000493991 ADGRF2Q8IZF7 708 aa11.46□□□□□ -0.57
COL2A1-208ENST00000493991 USP6NLQ92738 828 aa11.46□□□□□ -0.57
COL2A1-208ENST00000493991 ELOVL4Q9GZR5 314 aa11.46□□□□□ -0.57
COL2A1-208ENST00000493991 IL1RAPL1Q9NZN1 696 aa11.46□□□□□ -0.57
COL2A1-208ENST00000493991 WDR35Q9P2L0 1181 aa11.46□□□□□ -0.57
COL2A1-208ENST00000493991 ZFP69BQ9UJL9 534 aa11.46□□□□□ -0.57
COL2A1-208ENST00000493991 PCNTO95613 3336 aa11.46□□□□□ -0.57
COL2A1-208ENST00000493991 CCDC88AQ3V6T2 1871 aa11.46□□□□□ -0.57
COL2A1-208ENST00000493991 FAM47DPA6NHR8 397 aa11.46□□□□□ -0.57
COL2A1-208ENST00000493991 MAPK13O15264 365 aa11.46□□□□□ -0.57
COL2A1-208ENST00000493991 MSCO60682 206 aa11.46□□□□□ -0.57
COL2A1-208ENST00000493991 MMP8P22894 467 aa11.46□□□□□ -0.57
COL2A1-208ENST00000493991 MLH1P40692 756 aa11.46□□□□□ -0.57
COL2A1-208ENST00000493991 CCNHP51946 323 aaPredicted RBP11.46□□□□□ -0.57
COL2A1-208ENST00000493991 KDSRQ06136 332 aa11.46□□□□□ -0.57
COL2A1-208ENST00000493991 POU5F1BQ06416 359 aa11.46□□□□□ -0.57
COL2A1-208ENST00000493991 FAM183BPQ6ZVS7 135 aa11.46□□□□□ -0.57
COL2A1-208ENST00000493991 UNC45BQ8IWX7 931 aa11.46□□□□□ -0.57
COL2A1-208ENST00000493991 PABPC5Q96DU9 382 aaKnown RBP11.46□□□□□ -0.57
COL2A1-208ENST00000493991 SGF29Q96ES7 293 aa11.46□□□□□ -0.57
COL2A1-208ENST00000493991 ZNF560Q96MR9 790 aa11.46□□□□□ -0.57
COL2A1-208ENST00000493991 RSAD1Q9HA92 442 aa11.46□□□□□ -0.57
COL2A1-208ENST00000493991 SLCO1B3Q9NPD5 702 aa11.46□□□□□ -0.57
COL2A1-208ENST00000493991 TXLNGQ9NUQ3 528 aa11.46□□□□□ -0.57
COL2A1-208ENST00000493991 RPTORQ8N122 1335 aa11.46□□□□□ -0.57
COL2A1-208ENST00000493991 IQANK1A0A1B0GTG1 560 aa11.46□□□□□ -0.58
COL2A1-208ENST00000493991 ERBB2P04626 1255 aa11.46□□□□□ -0.58
COL2A1-208ENST00000493991 VCPP55072 806 aaKnown RBP11.46□□□□□ -0.58
COL2A1-208ENST00000493991 COPS2P61201 443 aa11.46□□□□□ -0.58
COL2A1-208ENST00000493991 CAV1Q03135 178 aa11.46□□□□□ -0.58
COL2A1-208ENST00000493991 EFTUD2Q15029 972 aaKnown RBP eCLIP11.46□□□□□ -0.586e-7■■■■■ 47.1
COL2A1-208ENST00000493991 PREPLQ4J6C6 727 aaPredicted RBP11.46□□□□□ -0.58
COL2A1-208ENST00000493991 SDHAF4Q5VUM1 108 aa11.46□□□□□ -0.58
COL2A1-208ENST00000493991 C12orf56Q8IXR9 622 aa11.46□□□□□ -0.58
COL2A1-208ENST00000493991 FAM161BQ96MY7 647 aa11.46□□□□□ -0.58
COL2A1-208ENST00000493991 NTPCRQ9BSD7 190 aaKnown RBP11.46□□□□□ -0.58
COL2A1-208ENST00000493991 CNPY3Q9BT09 278 aa11.46□□□□□ -0.58
COL2A1-208ENST00000493991 HAPLN2Q9GZV7 340 aa11.46□□□□□ -0.58
COL2A1-208ENST00000493991 CYP4F11Q9HBI6 524 aa11.46□□□□□ -0.58
COL2A1-208ENST00000493991 KRT82Q9NSB4 513 aa11.46□□□□□ -0.58
COL2A1-208ENST00000493991 F7P08709 466 aaPredicted RBP11.45□□□□□ -0.58
COL2A1-208ENST00000493991 CPB1P15086 417 aa11.45□□□□□ -0.58
COL2A1-208ENST00000493991 DRD4P21917 467 aa11.45□□□□□ -0.58
COL2A1-208ENST00000493991 TYK2P29597 1187 aa11.45□□□□□ -0.58
COL2A1-208ENST00000493991 CENPCQ03188 943 aa11.45□□□□□ -0.58
COL2A1-208ENST00000493991 SWT1Q5T5J6 900 aaKnown RBP11.45□□□□□ -0.58
COL2A1-208ENST00000493991 PPP1R2P3Q6NXS1 205 aa11.45□□□□□ -0.58
COL2A1-208ENST00000493991 PDZD4Q76G19 769 aaPredicted RBP11.45□□□□□ -0.58
COL2A1-208ENST00000493991 DEFB106AQ8N104 65 aa11.45□□□□□ -0.58
COL2A1-208ENST00000493991 CCNYL1Q8N7R7 359 aa11.45□□□□□ -0.58
COL2A1-208ENST00000493991 SPOCK2Q92563 424 aa11.45□□□□□ -0.58
COL2A1-208ENST00000493991 RNF39Q9H2S5 420 aa11.45□□□□□ -0.58
COL2A1-208ENST00000493991 LRFN2Q9ULH4 789 aa11.45□□□□□ -0.58
COL2A1-208ENST00000493991 AP4E1Q9UPM8 1137 aa11.45□□□□□ -0.58
COL2A1-208ENST00000493991 C17orf102A2RUQ5 167 aa11.45□□□□□ -0.58
COL2A1-208ENST00000493991 PMPCBO75439 489 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms