RNA–Protein interactions for RNA: ENST00000493952.2

SATB1-217, Transcript of SATB homeobox 1, humanhuman

TSL 3 BASIC

Gene SATB1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-217ENST00000493952 KCNJ12Q14500 433 aa17.05■□□□□ 0.32
SATB1-217ENST00000493952 SNX30Q5VWJ9 437 aa17.05■□□□□ 0.32
SATB1-217ENST00000493952 TRIM68Q6AZZ1 485 aa17.05■□□□□ 0.32
SATB1-217ENST00000493952 GJB7Q6PEY0 223 aa17.05■□□□□ 0.32
SATB1-217ENST00000493952 GBP6Q6ZN66 633 aa17.05■□□□□ 0.32
SATB1-217ENST00000493952 PIGZQ86VD9 579 aa17.05■□□□□ 0.32
SATB1-217ENST00000493952 CCDC105Q8IYK2 499 aa17.05■□□□□ 0.32
SATB1-217ENST00000493952 RBBP8NLQ8NC74 664 aaPredicted RBP17.05■□□□□ 0.32
SATB1-217ENST00000493952 TTC16Q8NEE8 873 aa17.05■□□□□ 0.32
SATB1-217ENST00000493952 PRSS33Q8NF86 280 aa17.05■□□□□ 0.32
SATB1-217ENST00000493952 TTC8Q8TAM2 541 aa17.05■□□□□ 0.32
SATB1-217ENST00000493952 SH3RF2Q8TEC5 729 aa17.05■□□□□ 0.32
SATB1-217ENST00000493952 TFAP2BQ92481 460 aa17.05■□□□□ 0.32
SATB1-217ENST00000493952 FAM83CQ9BQN1 747 aa17.05■□□□□ 0.32
SATB1-217ENST00000493952 TUBGCP2Q9BSJ2 902 aa17.05■□□□□ 0.32
SATB1-217ENST00000493952 CCSER2Q9H7U1 834 aa17.05■□□□□ 0.32
SATB1-217ENST00000493952 LTB4R2Q9NPC1 389 aa17.05■□□□□ 0.32
SATB1-217ENST00000493952 UBE2TQ9NPD8 197 aaPredicted RBP17.05■□□□□ 0.32
SATB1-217ENST00000493952 GKN1Q9NS71 199 aa17.05■□□□□ 0.32
SATB1-217ENST00000493952 SCML2Q9UQR0 700 aa17.05■□□□□ 0.32
SATB1-217ENST00000493952 SIT1Q9Y3P8 196 aa17.05■□□□□ 0.32
SATB1-217ENST00000493952 MTF2Q9Y483 593 aaPredicted RBP17.05■□□□□ 0.32
SATB1-217ENST00000493952 CACNA1IQ9P0X4 2223 aa17.05■□□□□ 0.32
SATB1-217ENST00000493952 WDFY4Q6ZS81 3184 aa17.04■□□□□ 0.32
SATB1-217ENST00000493952 TULP2O00295 520 aa17.04■□□□□ 0.32
SATB1-217ENST00000493952 O00370 1275 aa17.04■□□□□ 0.32
SATB1-217ENST00000493952 CYP26A1O43174 497 aa17.04■□□□□ 0.32
SATB1-217ENST00000493952 CALCAP01258 141 aa17.04■□□□□ 0.32
SATB1-217ENST00000493952 DCNP07585 359 aaKnown RBP17.04■□□□□ 0.32
SATB1-217ENST00000493952 TCF3P15923 654 aa17.04■□□□□ 0.32
SATB1-217ENST00000493952 TARSP26639 723 aaKnown RBP17.04■□□□□ 0.32
SATB1-217ENST00000493952 EEF1GP26641 437 aaKnown RBP17.04■□□□□ 0.32
SATB1-217ENST00000493952 PDE4CQ08493 712 aa17.04■□□□□ 0.32
SATB1-217ENST00000493952 UBXN2BQ14CS0 331 aa17.04■□□□□ 0.32
SATB1-217ENST00000493952 EXOC3L4Q17RC7 722 aa17.04■□□□□ 0.32
SATB1-217ENST00000493952 VWA3BQ502W6 1294 aa17.04■□□□□ 0.32
SATB1-217ENST00000493952 TCP11X2Q5H9J9 407 aa17.04■□□□□ 0.32
SATB1-217ENST00000493952 HECTD3Q5T447 861 aa17.04■□□□□ 0.32
SATB1-217ENST00000493952 CC2D1AQ6P1N0 951 aaPredicted RBP17.04■□□□□ 0.32
SATB1-217ENST00000493952 ZSWIM1Q9BR11 485 aa17.04■□□□□ 0.32
SATB1-217ENST00000493952 KCNH6Q9H252 994 aa17.04■□□□□ 0.32
SATB1-217ENST00000493952 NDST4Q9H3R1 872 aa17.04■□□□□ 0.32
SATB1-217ENST00000493952 HPS4Q9NQG7 708 aa17.04■□□□□ 0.32
SATB1-217ENST00000493952 SMPD4Q9NXE4 827 aa17.04■□□□□ 0.32
SATB1-217ENST00000493952 APEX2Q9UBZ4 518 aa17.04■□□□□ 0.32
SATB1-217ENST00000493952 KIAA1257Q9ULG3 409 aa17.04■□□□□ 0.32
SATB1-217ENST00000493952 CPQQ9Y646 472 aa17.04■□□□□ 0.32
SATB1-217ENST00000493952 LEFTY2O00292 366 aa17.03■□□□□ 0.32
SATB1-217ENST00000493952 COCHO43405 550 aa17.03■□□□□ 0.32
SATB1-217ENST00000493952 MBL2P11226 248 aaPredicted RBP17.03■□□□□ 0.32
SATB1-217ENST00000493952 GLULP15104 373 aa17.03■□□□□ 0.32
SATB1-217ENST00000493952 ARSAP15289 507 aa17.03■□□□□ 0.32
SATB1-217ENST00000493952 BRD2P25440 801 aaKnown RBP17.03■□□□□ 0.32
SATB1-217ENST00000493952 PON1P27169 355 aa17.03■□□□□ 0.32
SATB1-217ENST00000493952 TUBP50607 506 aa17.03■□□□□ 0.32
SATB1-217ENST00000493952 KPNA1P52294 538 aaPredicted RBP17.03■□□□□ 0.32
SATB1-217ENST00000493952 BCAT1P54687 386 aa17.03■□□□□ 0.32
SATB1-217ENST00000493952 MLLT6P55198 1093 aaPredicted RBP17.03■□□□□ 0.32
SATB1-217ENST00000493952 RAB41Q5JT25 222 aa17.03■□□□□ 0.32
SATB1-217ENST00000493952 CDKAL1Q5VV42 579 aa17.03■□□□□ 0.32
SATB1-217ENST00000493952 CAVIN1Q6NZI2 390 aaKnown RBP17.03■□□□□ 0.32
SATB1-217ENST00000493952 ZNF852Q6ZMS4 543 aa17.03■□□□□ 0.32
SATB1-217ENST00000493952 CCDC186Q7Z3E2 898 aa17.03■□□□□ 0.32
SATB1-217ENST00000493952 UBA3Q8TBC4 463 aa17.03■□□□□ 0.32
SATB1-217ENST00000493952 EBF3Q9H4W6 596 aa17.03■□□□□ 0.32
SATB1-217ENST00000493952 SIX2Q9NPC8 291 aa17.03■□□□□ 0.32
SATB1-217ENST00000493952 TLR8Q9NR97 1041 aaKnown RBP17.03■□□□□ 0.32
SATB1-217ENST00000493952 OSER1Q9NX31 292 aa17.03■□□□□ 0.32
SATB1-217ENST00000493952 DLGAP2Q9P1A6 1054 aa17.03■□□□□ 0.32
SATB1-217ENST00000493952 HESX1Q9UBX0 185 aa17.03■□□□□ 0.32
SATB1-217ENST00000493952 CNTN6Q9UQ52 1028 aa17.03■□□□□ 0.32
SATB1-217ENST00000493952 ARIH1Q9Y4X5 557 aaPredicted RBP17.03■□□□□ 0.32
SATB1-217ENST00000493952 WNT6Q9Y6F9 365 aa17.03■□□□□ 0.32
SATB1-217ENST00000493952 USP3Q9Y6I4 520 aa17.03■□□□□ 0.32
SATB1-217ENST00000493952 OTOL1A6NHN0 477 aaPredicted RBP17.02■□□□□ 0.32
SATB1-217ENST00000493952 FAM170BA6NMN3 283 aa17.02■□□□□ 0.32
SATB1-217ENST00000493952 MAN2B1O00754 1011 aa17.02■□□□□ 0.32
SATB1-217ENST00000493952 XPO1O14980 1071 aaKnown RBP17.02■□□□□ 0.32
SATB1-217ENST00000493952 GALR2O43603 387 aaPredicted RBP17.02■□□□□ 0.32
SATB1-217ENST00000493952 TLR5O60602 858 aa17.02■□□□□ 0.32
SATB1-217ENST00000493952 KRT5P13647 590 aa17.02■□□□□ 0.32
SATB1-217ENST00000493952 CTHP32929 405 aa17.02■□□□□ 0.32
SATB1-217ENST00000493952 NUBP1P53384 320 aa17.02■□□□□ 0.32
SATB1-217ENST00000493952 SLC8A3P57103 927 aa17.02■□□□□ 0.32
SATB1-217ENST00000493952 TYRO3Q06418 890 aa17.02■□□□□ 0.32
SATB1-217ENST00000493952 BST2Q10589 180 aaKnown RBP17.02■□□□□ 0.32
SATB1-217ENST00000493952 TCF15Q12870 199 aa17.02■□□□□ 0.32
SATB1-217ENST00000493952 ARHGAP44Q17R89 818 aa17.02■□□□□ 0.32
SATB1-217ENST00000493952 ITPRIPL2Q3MIP1 535 aa17.02■□□□□ 0.32
SATB1-217ENST00000493952 PKDCCQ504Y2 493 aa17.02■□□□□ 0.32
SATB1-217ENST00000493952 LCLAT1Q6UWP7 414 aa17.02■□□□□ 0.32
SATB1-217ENST00000493952 ENOSF1Q7L5Y1 443 aa17.02■□□□□ 0.32
SATB1-217ENST00000493952 ZNF687Q8N1G0 1237 aa17.02■□□□□ 0.32
SATB1-217ENST00000493952 OSCP1Q8WVF1 389 aa17.02■□□□□ 0.32
SATB1-217ENST00000493952 FAM3CQ92520 227 aa17.02■□□□□ 0.32
SATB1-217ENST00000493952 ZFRQ96KR1 1074 aaKnown RBP17.02■□□□□ 0.32
SATB1-217ENST00000493952 OSBPL6Q9BZF3 934 aa17.02■□□□□ 0.32
SATB1-217ENST00000493952 UBXN6Q9BZV1 441 aa17.02■□□□□ 0.32
SATB1-217ENST00000493952 C8orf33Q9H7E9 229 aaPredicted RBP17.02■□□□□ 0.32
SATB1-217ENST00000493952 NMUR1Q9HB89 426 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms