RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 RAB20Q9NX57 234 aa13.37□□□□□ -0.27
HSPG2-212ENST00000493940 DUS2Q9NX74 493 aaKnown RBP13.37□□□□□ -0.27
HSPG2-212ENST00000493940 GMIPQ9P107 970 aa13.37□□□□□ -0.27
HSPG2-212ENST00000493940 ZMYM5Q9UJ78 669 aa13.37□□□□□ -0.27
HSPG2-212ENST00000493940 CPQQ9Y646 472 aa13.37□□□□□ -0.27
HSPG2-212ENST00000493940 CEP192Q8TEP8 1941 aa13.37□□□□□ -0.27
HSPG2-212ENST00000493940 TRDMT1O14717 391 aaKnown RBP13.36□□□□□ -0.27
HSPG2-212ENST00000493940 COCHO43405 550 aa13.36□□□□□ -0.27
HSPG2-212ENST00000493940 SMC2O95347 1197 aa13.36□□□□□ -0.27
HSPG2-212ENST00000493940 TBX18O95935 607 aa13.36□□□□□ -0.27
HSPG2-212ENST00000493940 TCF3P15923 654 aa13.36□□□□□ -0.27
HSPG2-212ENST00000493940 GTF2H1P32780 548 aa13.36□□□□□ -0.27
HSPG2-212ENST00000493940 MAGEA9P43362 315 aa13.36□□□□□ -0.27
HSPG2-212ENST00000493940 RAD23BP54727 409 aa13.36□□□□□ -0.27
HSPG2-212ENST00000493940 SLC7A9P82251 487 aa13.36□□□□□ -0.27
HSPG2-212ENST00000493940 SRSF5Q13243 272 aaKnown RBP13.36□□□□□ -0.27
HSPG2-212ENST00000493940 TTI2Q6NXR4 508 aa13.36□□□□□ -0.27
HSPG2-212ENST00000493940 ADGRG2Q8IZP9 1017 aa13.36□□□□□ -0.27
HSPG2-212ENST00000493940 SLC4A11Q8NBS3 891 aa13.36□□□□□ -0.27
HSPG2-212ENST00000493940 FBXL13Q8NEE6 735 aa13.36□□□□□ -0.27
HSPG2-212ENST00000493940 SLC35C1Q96A29 364 aa13.36□□□□□ -0.27
HSPG2-212ENST00000493940 JAKMIP2Q96AA8 810 aa13.36□□□□□ -0.27
HSPG2-212ENST00000493940 RMDN1Q96DB5 314 aa13.36□□□□□ -0.27
HSPG2-212ENST00000493940 SMARCD1Q96GM5 515 aa13.36□□□□□ -0.27
HSPG2-212ENST00000493940 CYP3A43Q9HB55 503 aa13.36□□□□□ -0.27
HSPG2-212ENST00000493940 DMAP1Q9NPF5 467 aaPredicted RBP13.36□□□□□ -0.27
HSPG2-212ENST00000493940 COQ4Q9Y3A0 265 aa13.36□□□□□ -0.27
HSPG2-212ENST00000493940 LAMA1P25391 3075 aa13.35□□□□□ -0.27
HSPG2-212ENST00000493940 THADAQ6YHU6 1953 aa13.35□□□□□ -0.27
HSPG2-212ENST00000493940 CALCAP01258 141 aa13.35□□□□□ -0.27
HSPG2-212ENST00000493940 EPB41P11171 864 aaKnown RBP13.35□□□□□ -0.27
HSPG2-212ENST00000493940 P4HA1P13674 534 aa13.35□□□□□ -0.27
HSPG2-212ENST00000493940 OPRD1P41143 372 aa13.35□□□□□ -0.27
HSPG2-212ENST00000493940 SLC6A11P48066 632 aa13.35□□□□□ -0.27
HSPG2-212ENST00000493940 MXI1P50539 228 aa13.35□□□□□ -0.27
HSPG2-212ENST00000493940 STX17P56962 302 aa13.35□□□□□ -0.27
HSPG2-212ENST00000493940 FKBP3Q00688 224 aaKnown RBP13.35□□□□□ -0.27
HSPG2-212ENST00000493940 DCAF17Q5H9S7 520 aaPredicted RBP13.35□□□□□ -0.27
HSPG2-212ENST00000493940 TCERG1LQ5VWI1 586 aa13.35□□□□□ -0.27
HSPG2-212ENST00000493940 SNX30Q5VWJ9 437 aa13.35□□□□□ -0.27
HSPG2-212ENST00000493940 KLHL10Q6JEL2 608 aa13.35□□□□□ -0.27
HSPG2-212ENST00000493940 FILIP1Q7Z7B0 1213 aa13.35□□□□□ -0.27
HSPG2-212ENST00000493940 UBR7Q8N806 425 aa13.35□□□□□ -0.27
HSPG2-212ENST00000493940 FBXO32Q969P5 355 aa13.35□□□□□ -0.27
HSPG2-212ENST00000493940 P2RY11Q96G91 374 aa13.35□□□□□ -0.27
HSPG2-212ENST00000493940 NT5C1AQ9BXI3 368 aa13.35□□□□□ -0.27
HSPG2-212ENST00000493940 NMUR1Q9HB89 426 aa13.35□□□□□ -0.27
HSPG2-212ENST00000493940 CISHQ9NSE2 258 aa13.35□□□□□ -0.27
HSPG2-212ENST00000493940 NUDT5Q9UKK9 219 aa13.35□□□□□ -0.27
HSPG2-212ENST00000493940 NUP205Q92621 2012 aa13.35□□□□□ -0.27
HSPG2-212ENST00000493940 GON4LQ3T8J9 2241 aa13.34□□□□□ -0.27
HSPG2-212ENST00000493940 CHURC1-FNTBB4DL54 471 aa13.34□□□□□ -0.27
HSPG2-212ENST00000493940 TULP2O00295 520 aa13.34□□□□□ -0.27
HSPG2-212ENST00000493940 MDM4O15151 490 aa13.34□□□□□ -0.27
HSPG2-212ENST00000493940 SLC16A3O15427 465 aaKnown RBP13.34□□□□□ -0.27
HSPG2-212ENST00000493940 HRO43593 1189 aa13.34□□□□□ -0.27
HSPG2-212ENST00000493940 GREM1O60565 184 aa13.34□□□□□ -0.27
HSPG2-212ENST00000493940 RTN3O95197 1032 aaPredicted RBP13.34□□□□□ -0.27
HSPG2-212ENST00000493940 MBL2P11226 248 aaPredicted RBP13.34□□□□□ -0.27
HSPG2-212ENST00000493940 CXCL12P48061 93 aa13.34□□□□□ -0.27
HSPG2-212ENST00000493940 FNTBP49356 437 aa13.34□□□□□ -0.27
HSPG2-212ENST00000493940 LRRC63Q05C16 580 aa13.34□□□□□ -0.27
HSPG2-212ENST00000493940 LRMPQ12912 555 aa13.34□□□□□ -0.27
HSPG2-212ENST00000493940 PDGFRLQ15198 375 aa13.34□□□□□ -0.27
HSPG2-212ENST00000493940 DGKKQ5KSL6 1271 aa13.34□□□□□ -0.27
HSPG2-212ENST00000493940 CC2D1AQ6P1N0 951 aaPredicted RBP13.34□□□□□ -0.27
HSPG2-212ENST00000493940 RHBDF2Q6PJF5 856 aa13.34□□□□□ -0.27
HSPG2-212ENST00000493940 ZC3H14Q6PJT7 736 aaKnown RBP13.34□□□□□ -0.27
HSPG2-212ENST00000493940 SCD5Q86SK9 330 aa13.34□□□□□ -0.27
HSPG2-212ENST00000493940 C12orf40Q86WS4 652 aa13.34□□□□□ -0.27
HSPG2-212ENST00000493940 SPEM1Q8N4L4 309 aa13.34□□□□□ -0.27
HSPG2-212ENST00000493940 LMO3Q8TAP4 145 aa13.34□□□□□ -0.27
HSPG2-212ENST00000493940 KAT5Q92993 513 aa13.34□□□□□ -0.27
HSPG2-212ENST00000493940 MSANTD3Q96H12 275 aa13.34□□□□□ -0.27
HSPG2-212ENST00000493940 DHTKD1Q96HY7 919 aaPredicted RBP13.34□□□□□ -0.27
HSPG2-212ENST00000493940 SLITRK1Q96PX8 696 aa13.34□□□□□ -0.27
HSPG2-212ENST00000493940 ZSCAN32Q9NX65 697 aa13.34□□□□□ -0.27
HSPG2-212ENST00000493940 CFAP97Q9P2B7 532 aa13.34□□□□□ -0.27
HSPG2-212ENST00000493940 CIZ1Q9ULV3 898 aaPredicted RBP13.34□□□□□ -0.27
HSPG2-212ENST00000493940 RNF225M0QZC1 329 aaPredicted RBP13.33□□□□□ -0.28
HSPG2-212ENST00000493940 CYP26A1O43174 497 aa13.33□□□□□ -0.28
HSPG2-212ENST00000493940 KINO60870 393 aaKnown RBP13.33□□□□□ -0.28
HSPG2-212ENST00000493940 GABBR2O75899 941 aa13.33□□□□□ -0.28
HSPG2-212ENST00000493940 CYP17A1P05093 508 aa13.33□□□□□ -0.28
HSPG2-212ENST00000493940 CHRM1P11229 460 aaPredicted RBP13.33□□□□□ -0.28
HSPG2-212ENST00000493940 PPP3CCP48454 512 aa13.33□□□□□ -0.28
HSPG2-212ENST00000493940 IFNAR2P48551 515 aa13.33□□□□□ -0.28
HSPG2-212ENST00000493940 PXNP49023 591 aaPredicted RBP13.33□□□□□ -0.28
HSPG2-212ENST00000493940 PUM1Q14671 1186 aaKnown RBP eCLIP13.33□□□□□ -0.28
HSPG2-212ENST00000493940 CAMK4Q16566 473 aa13.33□□□□□ -0.28
HSPG2-212ENST00000493940 NELFBQ8WX92 580 aa13.33□□□□□ -0.28
HSPG2-212ENST00000493940 OVCA2Q8WZ82 227 aa13.33□□□□□ -0.28
HSPG2-212ENST00000493940 NDRG1Q92597 394 aaKnown RBP13.33□□□□□ -0.28
HSPG2-212ENST00000493940 RUBCNQ92622 972 aa13.33□□□□□ -0.28
HSPG2-212ENST00000493940 HEXIM2Q96MH2 286 aaKnown RBP13.33□□□□□ -0.28
HSPG2-212ENST00000493940 TSG101Q99816 390 aa13.33□□□□□ -0.28
HSPG2-212ENST00000493940 ZSWIM1Q9BR11 485 aa13.33□□□□□ -0.28
HSPG2-212ENST00000493940 CTNND2Q9UQB3 1225 aa13.33□□□□□ -0.28
HSPG2-212ENST00000493940 ATP8B3O60423 1300 aa13.33□□□□□ -0.28
HSPG2-212ENST00000493940 A0A1W2PQH9 124 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms