RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 GPR158Q5T848 1215 aa18.82■□□□□ 0.6
PDLIM7-208ENST00000493815 NAA35Q5VZE5 725 aa18.82■□□□□ 0.6
PDLIM7-208ENST00000493815 SIX6OS1Q8N1H7 587 aa18.82■□□□□ 0.6
PDLIM7-208ENST00000493815 CLEC4CQ8WTT0 213 aa18.82■□□□□ 0.6
PDLIM7-208ENST00000493815 KCTD13Q8WZ19 329 aa18.82■□□□□ 0.6
PDLIM7-208ENST00000493815 CPXM1Q96SM3 734 aa18.82■□□□□ 0.6
PDLIM7-208ENST00000493815 AGPAT1Q99943 283 aa18.82■□□□□ 0.6
PDLIM7-208ENST00000493815 MIS12Q9H081 205 aa18.82■□□□□ 0.6
PDLIM7-208ENST00000493815 FBXO44Q9H4M3 255 aa18.82■□□□□ 0.6
PDLIM7-208ENST00000493815 TRPC7Q9HCX4 862 aa18.82■□□□□ 0.6
PDLIM7-208ENST00000493815 EHD2Q9NZN4 543 aa18.82■□□□□ 0.6
PDLIM7-208ENST00000493815 SCML2Q9UQR0 700 aa18.82■□□□□ 0.6
PDLIM7-208ENST00000493815 FAM92AA1XBS5 289 aa18.82■□□□□ 0.6
PDLIM7-208ENST00000493815 ZNF840PA6NDX5 716 aa18.82■□□□□ 0.6
PDLIM7-208ENST00000493815 GOLGA6L3A6NEY3 463 aa18.82■□□□□ 0.6
PDLIM7-208ENST00000493815 E5RJQ4 531 aa18.82■□□□□ 0.6
PDLIM7-208ENST00000493815 CCDC172P0C7W6 258 aa18.82■□□□□ 0.6
PDLIM7-208ENST00000493815 TRIM14Q14142 442 aa18.82■□□□□ 0.6
PDLIM7-208ENST00000493815 C2CD6Q53TS8 623 aa18.82■□□□□ 0.6
PDLIM7-208ENST00000493815 ZNF571Q7Z3V5 609 aaPredicted RBP18.82■□□□□ 0.6
PDLIM7-208ENST00000493815 ZNF677Q86XU0 584 aa18.82■□□□□ 0.6
PDLIM7-208ENST00000493815 SCUBE3Q8IX30 993 aa18.82■□□□□ 0.6
PDLIM7-208ENST00000493815 MAB21L3Q8N8X9 362 aa18.82■□□□□ 0.6
PDLIM7-208ENST00000493815 NMUR1Q9HB89 426 aa18.82■□□□□ 0.6
PDLIM7-208ENST00000493815 OSER1Q9NX31 292 aa18.82■□□□□ 0.6
PDLIM7-208ENST00000493815 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.82■□□□□ 0.69e-8■■■■■ 27
PDLIM7-208ENST00000493815 TRPM5Q9NZQ8 1165 aa18.82■□□□□ 0.6
PDLIM7-208ENST00000493815 CDH7Q9ULB5 785 aa18.82■□□□□ 0.6
PDLIM7-208ENST00000493815 CEP83Q9Y592 693 aa18.82■□□□□ 0.6
PDLIM7-208ENST00000493815 PATJQ8NI35 1801 aa18.81■□□□□ 0.6
PDLIM7-208ENST00000493815 A0A1W2PQH9 124 aa18.81■□□□□ 0.6
PDLIM7-208ENST00000493815 FGF19O95750 216 aa18.81■□□□□ 0.6
PDLIM7-208ENST00000493815 ZBED1O96006 694 aa18.81■□□□□ 0.6
PDLIM7-208ENST00000493815 PLEKP08567 350 aaPredicted RBP18.81■□□□□ 0.6
PDLIM7-208ENST00000493815 HGSNATQ68CP4 663 aa18.81■□□□□ 0.6
PDLIM7-208ENST00000493815 OTOP3Q7RTS5 596 aa18.81■□□□□ 0.6
PDLIM7-208ENST00000493815 TMEM35BQ8NCS4 154 aa18.81■□□□□ 0.6
PDLIM7-208ENST00000493815 SLC30A5Q8TAD4 765 aa18.81■□□□□ 0.6
PDLIM7-208ENST00000493815 OLIG1Q8TAK6 271 aa18.81■□□□□ 0.6
PDLIM7-208ENST00000493815 MRPS31Q92665 395 aaKnown RBP18.81■□□□□ 0.6
PDLIM7-208ENST00000493815 PPP1R13BQ96KQ4 1090 aa18.81■□□□□ 0.6
PDLIM7-208ENST00000493815 HSFY1Q96LI6 401 aa18.81■□□□□ 0.6
PDLIM7-208ENST00000493815 NECAB3Q96P71 396 aaPredicted RBP18.81■□□□□ 0.6
PDLIM7-208ENST00000493815 SLC22A12Q96S37 553 aa18.81■□□□□ 0.6
PDLIM7-208ENST00000493815 CYP2S1Q96SQ9 504 aa18.81■□□□□ 0.6
PDLIM7-208ENST00000493815 SLC4A5Q9BY07 1137 aa18.81■□□□□ 0.6
PDLIM7-208ENST00000493815 SLC46A2Q9BY10 475 aa18.81■□□□□ 0.6
PDLIM7-208ENST00000493815 SMG9Q9H0W8 520 aaKnown RBP18.81■□□□□ 0.6
PDLIM7-208ENST00000493815 GRPEL1Q9HAV7 217 aa18.81■□□□□ 0.6
PDLIM7-208ENST00000493815 TCF20Q9UGU0 1960 aaKnown RBP18.81■□□□□ 0.6
PDLIM7-208ENST00000493815 DENND4AQ7Z401 1863 aa18.8■□□□□ 0.6
PDLIM7-208ENST00000493815 MFAP3LO75121 409 aa18.8■□□□□ 0.6
PDLIM7-208ENST00000493815 TPM1P09493 284 aa18.8■□□□□ 0.6
PDLIM7-208ENST00000493815 LAMP2P13473 410 aa18.8■□□□□ 0.6
PDLIM7-208ENST00000493815 NOMO3P69849 1222 aa18.8■□□□□ 0.6
PDLIM7-208ENST00000493815 PTPN20Q4JDL3 420 aa18.8■□□□□ 0.6
PDLIM7-208ENST00000493815 TDRD12Q587J7 1177 aaKnown RBP18.8■□□□□ 0.6
PDLIM7-208ENST00000493815 CCDC186Q7Z3E2 898 aa18.8■□□□□ 0.6
PDLIM7-208ENST00000493815 SCD5Q86SK9 330 aa18.8■□□□□ 0.6
PDLIM7-208ENST00000493815 DRC7Q8IY82 874 aa18.8■□□□□ 0.6
PDLIM7-208ENST00000493815 TDRD5Q8NAT2 981 aaKnown RBP18.8■□□□□ 0.6
PDLIM7-208ENST00000493815 STK32AQ8WU08 396 aa18.8■□□□□ 0.6
PDLIM7-208ENST00000493815 SYT11Q9BT88 431 aa18.8■□□□□ 0.6
PDLIM7-208ENST00000493815 NUCKS1Q9H1E3 243 aaKnown RBP18.8■□□□□ 0.6
PDLIM7-208ENST00000493815 COMMD8Q9NX08 183 aa18.8■□□□□ 0.6
PDLIM7-208ENST00000493815 ZNF638Q14966 1978 aaKnown RBP18.8■□□□□ 0.6
PDLIM7-208ENST00000493815 ERBB2P04626 1255 aa18.79■□□□□ 0.6
PDLIM7-208ENST00000493815 CYP1A1P04798 512 aaPredicted RBP18.79■□□□□ 0.6
PDLIM7-208ENST00000493815 CDH5P33151 784 aaPredicted RBP18.79■□□□□ 0.6
PDLIM7-208ENST00000493815 PRKCIP41743 596 aa18.79■□□□□ 0.6
PDLIM7-208ENST00000493815 RPL34P49207 117 aaKnown RBP18.79■□□□□ 0.6
PDLIM7-208ENST00000493815 ZP2Q05996 745 aa18.79■□□□□ 0.6
PDLIM7-208ENST00000493815 ARHGAP15Q53QZ3 475 aa18.79■□□□□ 0.6
PDLIM7-208ENST00000493815 PM20D1Q6GTS8 502 aa18.79■□□□□ 0.6
PDLIM7-208ENST00000493815 BHLHA9Q7RTU4 235 aa18.79■□□□□ 0.6
PDLIM7-208ENST00000493815 TMEM110Q86TL2 294 aa18.79■□□□□ 0.6
PDLIM7-208ENST00000493815 FMNL3Q8IVF7 1028 aa18.79■□□□□ 0.6
PDLIM7-208ENST00000493815 ADHFE1Q8IWW8 467 aa18.79■□□□□ 0.6
PDLIM7-208ENST00000493815 SPC24Q8NBT2 197 aa18.79■□□□□ 0.6
PDLIM7-208ENST00000493815 OR8K1Q8NGG5 319 aa18.79■□□□□ 0.6
PDLIM7-208ENST00000493815 ZSCAN18Q8TBC5 510 aaPredicted RBP18.79■□□□□ 0.6
PDLIM7-208ENST00000493815 SYN2Q92777 582 aaPredicted RBP18.79■□□□□ 0.6
PDLIM7-208ENST00000493815 ACSF2Q96CM8 615 aaPredicted RBP18.79■□□□□ 0.6
PDLIM7-208ENST00000493815 DNAJC7Q99615 494 aa18.79■□□□□ 0.6
PDLIM7-208ENST00000493815 CCSER2Q9H7U1 834 aa18.79■□□□□ 0.6
PDLIM7-208ENST00000493815 NAGPAQ9UK23 515 aa18.79■□□□□ 0.6
PDLIM7-208ENST00000493815 NUDT5Q9UKK9 219 aa18.79■□□□□ 0.6
PDLIM7-208ENST00000493815 USTQ9Y2C2 406 aa18.79■□□□□ 0.6
PDLIM7-208ENST00000493815 YJEFN3A6XGL0 299 aa18.79■□□□□ 0.6
PDLIM7-208ENST00000493815 E7ENQ6 273 aa18.79■□□□□ 0.6
PDLIM7-208ENST00000493815 PAPSS1O43252 624 aaPredicted RBP18.79■□□□□ 0.6
PDLIM7-208ENST00000493815 LSM8O95777 96 aaKnown RBP18.79■□□□□ 0.6
PDLIM7-208ENST00000493815 ZDHHC11BP0C7U3 371 aa18.79■□□□□ 0.6
PDLIM7-208ENST00000493815 TNFAIP3P21580 790 aa18.79■□□□□ 0.6
PDLIM7-208ENST00000493815 FAM78AQ5JUQ0 283 aa18.79■□□□□ 0.6
PDLIM7-208ENST00000493815 WDR59Q6PJI9 974 aa18.79■□□□□ 0.6
PDLIM7-208ENST00000493815 HFE2Q6ZVN8 426 aa18.79■□□□□ 0.6
PDLIM7-208ENST00000493815 MON1AQ86VX9 555 aa18.79■□□□□ 0.6
PDLIM7-208ENST00000493815 DNAAF5Q86Y56 855 aa18.79■□□□□ 0.6
PDLIM7-208ENST00000493815 ARL14EPQ8N8R7 260 aaPredicted RBP18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms