RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 UNC13BO14795 1591 aa20.78■□□□□ 0.92
RNF40-203ENST00000493683 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.78■□□□□ 0.92
RNF40-203ENST00000493683 DLGAP3O95886 979 aa20.78■□□□□ 0.92
RNF40-203ENST00000493683 MPOP05164 745 aa20.78■□□□□ 0.92
RNF40-203ENST00000493683 ZNF177Q13360 481 aaPredicted RBP20.78■□□□□ 0.92
RNF40-203ENST00000493683 DENND5BQ6ZUT9 1274 aa20.78■□□□□ 0.92
RNF40-203ENST00000493683 DDIT4Q9NX09 232 aa20.78■□□□□ 0.92
RNF40-203ENST00000493683 SHOC2Q9UQ13 582 aa20.78■□□□□ 0.92
RNF40-203ENST00000493683 NPTXRO95502 500 aa20.77■□□□□ 0.92
RNF40-203ENST00000493683 MZF1P28698 734 aaPredicted RBP20.77■□□□□ 0.92
RNF40-203ENST00000493683 ARMCX4Q5H9R4 360 aa20.77■□□□□ 0.92
RNF40-203ENST00000493683 SPDYCQ5MJ68 293 aa20.77■□□□□ 0.92
RNF40-203ENST00000493683 TAF2Q6P1X5 1199 aa20.77■□□□□ 0.92
RNF40-203ENST00000493683 SPOCD1Q6ZMY3 1216 aa20.77■□□□□ 0.92
RNF40-203ENST00000493683 ZCCHC11Q5TAX3 1644 aaKnown RBP20.77■□□□□ 0.92
RNF40-203ENST00000493683 ETFBP38117 255 aa20.77■□□□□ 0.92
RNF40-203ENST00000493683 ZNF467Q7Z7K2 595 aaPredicted RBP20.77■□□□□ 0.92
RNF40-203ENST00000493683 KCTD10Q9H3F6 313 aa20.77■□□□□ 0.92
RNF40-203ENST00000493683 CD248Q9HCU0 757 aa20.77■□□□□ 0.92
RNF40-203ENST00000493683 SPACA6W5XKT8 324 aa20.77■□□□□ 0.92
RNF40-203ENST00000493683 ALDH1A3P47895 512 aa20.77■□□□□ 0.92
RNF40-203ENST00000493683 RASA2Q15283 850 aa20.77■□□□□ 0.92
RNF40-203ENST00000493683 MYO1HQ8N1T3 1032 aa20.77■□□□□ 0.92
RNF40-203ENST00000493683 RUSC1Q9BVN2 902 aa20.77■□□□□ 0.92
RNF40-203ENST00000493683 TMEM120AQ9BXJ8 343 aa20.77■□□□□ 0.92
RNF40-203ENST00000493683 SNX13Q9Y5W8 968 aa20.77■□□□□ 0.92
RNF40-203ENST00000493683 PLEKP08567 350 aaPredicted RBP20.77■□□□□ 0.92
RNF40-203ENST00000493683 SERPINB5P36952 375 aa20.77■□□□□ 0.92
RNF40-203ENST00000493683 BCAT1P54687 386 aa20.77■□□□□ 0.92
RNF40-203ENST00000493683 OTUD4Q01804 1114 aaKnown RBP20.77■□□□□ 0.92
RNF40-203ENST00000493683 NFYCQ13952 458 aa20.77■□□□□ 0.92
RNF40-203ENST00000493683 CDKAL1Q5VV42 579 aa20.77■□□□□ 0.92
RNF40-203ENST00000493683 ATXN2LQ8WWM7 1075 aaKnown RBP20.77■□□□□ 0.92
RNF40-203ENST00000493683 LBHD1Q9BQE6 289 aaPredicted RBP20.77■□□□□ 0.92
RNF40-203ENST00000493683 PCDH9Q9HC56 1237 aa20.77■□□□□ 0.92
RNF40-203ENST00000493683 ACOT9Q9Y305 439 aa20.77■□□□□ 0.92
RNF40-203ENST00000493683 E2F8A0AVK6 867 aa20.77■□□□□ 0.91
RNF40-203ENST00000493683 CLPTM1O96005 669 aa20.77■□□□□ 0.91
RNF40-203ENST00000493683 MAPTP10636 758 aaKnown RBP20.77■□□□□ 0.91
RNF40-203ENST00000493683 RPS12P25398 132 aaKnown RBP20.77■□□□□ 0.91
RNF40-203ENST00000493683 AQP5P55064 265 aa20.77■□□□□ 0.91
RNF40-203ENST00000493683 MTA1Q13330 715 aa20.77■□□□□ 0.91
RNF40-203ENST00000493683 NCF4Q15080 339 aa20.77■□□□□ 0.91
RNF40-203ENST00000493683 CYP51A1Q16850 503 aa20.77■□□□□ 0.91
RNF40-203ENST00000493683 TRIM71Q2Q1W2 868 aaKnown RBP20.77■□□□□ 0.91
RNF40-203ENST00000493683 SLFN11Q7Z7L1 901 aa20.77■□□□□ 0.91
RNF40-203ENST00000493683 HS6ST3Q8IZP7 471 aa20.77■□□□□ 0.91
RNF40-203ENST00000493683 DNAJC16Q9Y2G8 782 aa20.77■□□□□ 0.91
RNF40-203ENST00000493683 RFX5P48382 616 aaPredicted RBP20.76■□□□□ 0.91
RNF40-203ENST00000493683 PTENP60484 403 aa20.76■□□□□ 0.91
RNF40-203ENST00000493683 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.76■□□□□ 0.91
RNF40-203ENST00000493683 CAPN6Q9Y6Q1 641 aa20.76■□□□□ 0.91
RNF40-203ENST00000493683 PIK3CDO00329 1044 aa20.76■□□□□ 0.91
RNF40-203ENST00000493683 PMPCBO75439 489 aa20.76■□□□□ 0.91
RNF40-203ENST00000493683 CPA3P15088 417 aa20.76■□□□□ 0.91
RNF40-203ENST00000493683 MPZL3Q6UWV2 235 aa20.76■□□□□ 0.91
RNF40-203ENST00000493683 VTI1BQ9UEU0 232 aa20.76■□□□□ 0.91
RNF40-203ENST00000493683 NEXMIFQ5QGS0 1516 aa20.76■□□□□ 0.91
RNF40-203ENST00000493683 CRTAMO95727 393 aa20.76■□□□□ 0.91
RNF40-203ENST00000493683 EGFRP00533 1210 aa20.76■□□□□ 0.91
RNF40-203ENST00000493683 TFE3P19532 575 aaPredicted RBP20.76■□□□□ 0.91
RNF40-203ENST00000493683 POLD3Q15054 466 aaPredicted RBP20.76■□□□□ 0.91
RNF40-203ENST00000493683 Q4G0T1 1027 aa20.76■□□□□ 0.91
RNF40-203ENST00000493683 ARMC6Q6NXE6 501 aa20.76■□□□□ 0.91
RNF40-203ENST00000493683 OOSP2Q86WS3 158 aa20.76■□□□□ 0.91
RNF40-203ENST00000493683 CAMKK2Q96RR4 588 aa20.76■□□□□ 0.91
RNF40-203ENST00000493683 TMEM51Q9NW97 253 aa20.76■□□□□ 0.91
RNF40-203ENST00000493683 TARBP1Q13395 1621 aaKnown RBP20.76■□□□□ 0.91
RNF40-203ENST00000493683 H7C4K7 107 aa20.76■□□□□ 0.91
RNF40-203ENST00000493683 EPC2Q52LR7 807 aa20.76■□□□□ 0.91
RNF40-203ENST00000493683 ARHGAP15Q53QZ3 475 aa20.76■□□□□ 0.91
RNF40-203ENST00000493683 PRR5LQ6MZQ0 368 aa20.76■□□□□ 0.91
RNF40-203ENST00000493683 EMILIN2Q9BXX0 1053 aa20.76■□□□□ 0.91
RNF40-203ENST00000493683 MMADHCQ9H3L0 296 aaPredicted RBP20.76■□□□□ 0.91
RNF40-203ENST00000493683 SPHKAPQ2M3C7 1700 aa20.76■□□□□ 0.91
RNF40-203ENST00000493683 CNOT3O75175 753 aaKnown RBP20.75■□□□□ 0.91
RNF40-203ENST00000493683 SKAP2O75563 359 aaPredicted RBP20.75■□□□□ 0.91
RNF40-203ENST00000493683 C6orf222P0C671 652 aaPredicted RBP20.75■□□□□ 0.91
RNF40-203ENST00000493683 SREBF1P36956 1147 aa20.75■□□□□ 0.91
RNF40-203ENST00000493683 HERVK_113P62684 666 aa20.75■□□□□ 0.91
RNF40-203ENST00000493683 CASP10Q92851 521 aa20.75■□□□□ 0.91
RNF40-203ENST00000493683 MAGED4Q96JG8 741 aa20.75■□□□□ 0.91
RNF40-203ENST00000493683 TMEM106CQ9BVX2 250 aa20.75■□□□□ 0.91
RNF40-203ENST00000493683 RXRGP48443 463 aa20.75■□□□□ 0.91
RNF40-203ENST00000493683 MGAT5Q09328 741 aa20.75■□□□□ 0.91
RNF40-203ENST00000493683 TMPRSS6Q8IU80 811 aa20.75■□□□□ 0.91
RNF40-203ENST00000493683 WDR49Q8IV35 697 aa20.75■□□□□ 0.91
RNF40-203ENST00000493683 POLE3Q9NRF9 147 aa20.75■□□□□ 0.91
RNF40-203ENST00000493683 KRT84Q9NSB2 600 aa20.75■□□□□ 0.91
RNF40-203ENST00000493683 F8VZ95 297 aa20.75■□□□□ 0.91
RNF40-203ENST00000493683 CCDC153Q494R4 210 aa20.75■□□□□ 0.91
RNF40-203ENST00000493683 SGF29Q96ES7 293 aa20.75■□□□□ 0.91
RNF40-203ENST00000493683 STARD13Q9Y3M8 1113 aa20.75■□□□□ 0.91
RNF40-203ENST00000493683 F5H5T6 163 aa20.75■□□□□ 0.91
RNF40-203ENST00000493683 ATP6AP1LQ52LC2 224 aa20.75■□□□□ 0.91
RNF40-203ENST00000493683 DSEQ9UL01 958 aa20.75■□□□□ 0.91
RNF40-203ENST00000493683 DLC1Q96QB1 1528 aa20.74■□□□□ 0.91
RNF40-203ENST00000493683 TRIM24O15164 1050 aa20.74■□□□□ 0.91
RNF40-203ENST00000493683 NTSR2O95665 410 aa20.74■□□□□ 0.91
RNF40-203ENST00000493683 C1QBPQ07021 282 aaKnown RBP20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms