RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 ERFEQ4G0M1 354 aa7.13□□□□□ -1.27
VPS13B-205ENST00000493587 DALRD3Q5D0E6 543 aaKnown RBP7.13□□□□□ -1.27
VPS13B-205ENST00000493587 HP1BP3Q5SSJ5 553 aaPredicted RBP7.13□□□□□ -1.27
VPS13B-205ENST00000493587 CLVS2Q5SYC1 327 aa7.13□□□□□ -1.27
VPS13B-205ENST00000493587 UBAP2Q5T6F2 1119 aaKnown RBP7.13□□□□□ -1.27
VPS13B-205ENST00000493587 LVRNQ6Q4G3 990 aa7.13□□□□□ -1.27
VPS13B-205ENST00000493587 C15orf52Q6ZUT6 534 aaKnown RBP7.13□□□□□ -1.27
VPS13B-205ENST00000493587 TRIM22Q8IYM9 498 aa7.13□□□□□ -1.27
VPS13B-205ENST00000493587 MAML1Q92585 1016 aa7.13□□□□□ -1.27
VPS13B-205ENST00000493587 PLIN2Q99541 437 aa7.13□□□□□ -1.27
VPS13B-205ENST00000493587 ROPN1BQ9BZX4 212 aaPredicted RBP7.13□□□□□ -1.27
VPS13B-205ENST00000493587 TLE6Q9H808 572 aa7.13□□□□□ -1.27
VPS13B-205ENST00000493587 ROPN1Q9HAT0 212 aaPredicted RBP7.13□□□□□ -1.27
VPS13B-205ENST00000493587 MOV10Q9HCE1 1003 aaKnown RBP7.13□□□□□ -1.27
VPS13B-205ENST00000493587 SEPT11Q9NVA2 429 aaKnown RBP7.13□□□□□ -1.27
VPS13B-205ENST00000493587 CNOT7Q9UIV1 285 aaKnown RBP7.13□□□□□ -1.27
VPS13B-205ENST00000493587 INPP5FQ9Y2H2 1132 aa7.13□□□□□ -1.27
VPS13B-205ENST00000493587 RTCBQ9Y3I0 505 aaKnown RBP7.13□□□□□ -1.27
VPS13B-205ENST00000493587 A0A0G2JMZ2 1700 aa7.12□□□□□ -1.27
VPS13B-205ENST00000493587 LRRC37A2A6NM11 1700 aa7.12□□□□□ -1.27
VPS13B-205ENST00000493587 ZNF839A8K0R7 811 aa7.12□□□□□ -1.27
VPS13B-205ENST00000493587 B8ZZF3 427 aa7.12□□□□□ -1.27
VPS13B-205ENST00000493587 ATP6V1G2-DDX39BF2Z307 99 aa7.12□□□□□ -1.27
VPS13B-205ENST00000493587 SERPINI2O75830 405 aa7.12□□□□□ -1.27
VPS13B-205ENST00000493587 IDH1O75874 414 aaKnown RBP7.12□□□□□ -1.27
VPS13B-205ENST00000493587 PLEKHA8P1O95397 391 aa7.12□□□□□ -1.27
VPS13B-205ENST00000493587 POLR2MP0CAP2 368 aa7.12□□□□□ -1.27
VPS13B-205ENST00000493587 RAG1P15918 1043 aa7.12□□□□□ -1.27
VPS13B-205ENST00000493587 PRKCAP17252 672 aa7.12□□□□□ -1.27
VPS13B-205ENST00000493587 CFL1P23528 166 aaKnown RBP7.12□□□□□ -1.27
VPS13B-205ENST00000493587 PON1P27169 355 aa7.12□□□□□ -1.27
VPS13B-205ENST00000493587 MAP4P27816 1152 aaKnown RBP7.12□□□□□ -1.27
VPS13B-205ENST00000493587 ST13P50502 369 aaKnown RBP7.12□□□□□ -1.27
VPS13B-205ENST00000493587 NAB2Q15742 525 aa7.12□□□□□ -1.27
VPS13B-205ENST00000493587 NPY5RQ15761 445 aa7.12□□□□□ -1.27
VPS13B-205ENST00000493587 FBXL19Q6PCT2 694 aa7.12□□□□□ -1.27
VPS13B-205ENST00000493587 JAMLQ86YT9 394 aa7.12□□□□□ -1.27
VPS13B-205ENST00000493587 ULK2Q8IYT8 1036 aa7.12□□□□□ -1.27
VPS13B-205ENST00000493587 CADM3Q8N126 398 aa7.12□□□□□ -1.27
VPS13B-205ENST00000493587 TERB1Q8NA31 727 aa7.12□□□□□ -1.27
VPS13B-205ENST00000493587 CATSPER1Q8NEC5 780 aa7.12□□□□□ -1.27
VPS13B-205ENST00000493587 SH3RF3Q8TEJ3 882 aaPredicted RBP7.12□□□□□ -1.27
VPS13B-205ENST00000493587 FAM172AQ8WUF8 416 aa7.12□□□□□ -1.27
VPS13B-205ENST00000493587 TRIM63Q969Q1 353 aa7.12□□□□□ -1.27
VPS13B-205ENST00000493587 ZNF486Q96H40 463 aaPredicted RBP7.12□□□□□ -1.27
VPS13B-205ENST00000493587 MAP6Q96JE9 813 aa7.12□□□□□ -1.27
VPS13B-205ENST00000493587 PANX3Q96QZ0 392 aa7.12□□□□□ -1.27
VPS13B-205ENST00000493587 STRBPQ96SI9 672 aaKnown RBP7.12□□□□□ -1.27
VPS13B-205ENST00000493587 CYP4F11Q9HBI6 524 aa7.12□□□□□ -1.27
VPS13B-205ENST00000493587 ALG13Q9NP73 1137 aaKnown RBP7.12□□□□□ -1.27
VPS13B-205ENST00000493587 ANKFY1Q9P2R3 1169 aa7.12□□□□□ -1.27
VPS13B-205ENST00000493587 SRP68Q9UHB9 627 aaKnown RBP7.12□□□□□ -1.27
VPS13B-205ENST00000493587 HERC5Q9UII4 1024 aaKnown RBP7.12□□□□□ -1.27
VPS13B-205ENST00000493587 APOBEC2Q9Y235 224 aaKnown RBP7.12□□□□□ -1.27
VPS13B-205ENST00000493587 SRPRBQ9Y5M8 271 aaKnown RBP7.12□□□□□ -1.27
VPS13B-205ENST00000493587 PFASO15067 1338 aa7.12□□□□□ -1.27
VPS13B-205ENST00000493587 SIP14410 1827 aa7.12□□□□□ -1.27
VPS13B-205ENST00000493587 CLOCKO15516 846 aa7.12□□□□□ -1.27
VPS13B-205ENST00000493587 KATNA1O75449 491 aa7.12□□□□□ -1.27
VPS13B-205ENST00000493587 FGAP02671 866 aa7.12□□□□□ -1.27
VPS13B-205ENST00000493587 POLR2CP19387 275 aaPredicted RBP7.12□□□□□ -1.27
VPS13B-205ENST00000493587 LRPAP1P30533 357 aa7.12□□□□□ -1.27
VPS13B-205ENST00000493587 LONP1P36776 959 aaKnown RBP7.12□□□□□ -1.27
VPS13B-205ENST00000493587 B2MP61769 119 aa7.12□□□□□ -1.27
VPS13B-205ENST00000493587 FAM122CQ6P4D5 195 aa7.12□□□□□ -1.27
VPS13B-205ENST00000493587 GALNT18Q6P9A2 607 aa7.12□□□□□ -1.27
VPS13B-205ENST00000493587 SH3RF1Q7Z6J0 888 aa7.12□□□□□ -1.27
VPS13B-205ENST00000493587 TMPRSS6Q8IU80 811 aa7.12□□□□□ -1.27
VPS13B-205ENST00000493587 SEPT12Q8IYM1 358 aa7.12□□□□□ -1.27
VPS13B-205ENST00000493587 C4orf33Q8N1A6 199 aa7.12□□□□□ -1.27
VPS13B-205ENST00000493587 ATP6V0D2Q8N8Y2 350 aa7.12□□□□□ -1.27
VPS13B-205ENST00000493587 C10orf82Q8WW14 230 aa7.12□□□□□ -1.27
VPS13B-205ENST00000493587 FIG4Q92562 907 aa7.12□□□□□ -1.27
VPS13B-205ENST00000493587 DPF3Q92784 378 aa7.12□□□□□ -1.27
VPS13B-205ENST00000493587 SERPINB12Q96P63 405 aa7.12□□□□□ -1.27
VPS13B-205ENST00000493587 MYL10Q9BUA6 226 aa7.12□□□□□ -1.27
VPS13B-205ENST00000493587 PACSIN1Q9BY11 444 aa7.12□□□□□ -1.27
VPS13B-205ENST00000493587 RBM38Q9H0Z9 239 aaKnown RBP7.12□□□□□ -1.27
VPS13B-205ENST00000493587 S100A14Q9HCY8 104 aa7.12□□□□□ -1.27
VPS13B-205ENST00000493587 SLC35C2Q9NQQ7 365 aa7.12□□□□□ -1.27
VPS13B-205ENST00000493587 ARMC1Q9NVT9 282 aa7.12□□□□□ -1.27
VPS13B-205ENST00000493587 WDR70Q9NW82 654 aa7.12□□□□□ -1.27
VPS13B-205ENST00000493587 IGSF9Q9P2J2 1179 aa7.12□□□□□ -1.27
VPS13B-205ENST00000493587 STK17AQ9UEE5 414 aa7.12□□□□□ -1.27
VPS13B-205ENST00000493587 NARFQ9UHQ1 456 aa7.12□□□□□ -1.27
VPS13B-205ENST00000493587 SOX13Q9UN79 622 aa7.12□□□□□ -1.27
VPS13B-205ENST00000493587 ST14Q9Y5Y6 855 aa7.12□□□□□ -1.27
VPS13B-205ENST00000493587 MYH11P35749 1972 aa7.12□□□□□ -1.27
VPS13B-205ENST00000493587 POTECB2RU33 542 aa7.11□□□□□ -1.27
VPS13B-205ENST00000493587 C2CD2LO14523 706 aa7.11□□□□□ -1.27
VPS13B-205ENST00000493587 TSPAN4O14817 238 aa7.11□□□□□ -1.27
VPS13B-205ENST00000493587 HDAC3O15379 428 aa7.11□□□□□ -1.27
VPS13B-205ENST00000493587 CTRB1P17538 263 aa7.11□□□□□ -1.27
VPS13B-205ENST00000493587 ATF6P18850 670 aa7.11□□□□□ -1.27
VPS13B-205ENST00000493587 TNNI2P48788 182 aa7.11□□□□□ -1.27
VPS13B-205ENST00000493587 APLP1P51693 650 aa7.11□□□□□ -1.27
VPS13B-205ENST00000493587 MARSP56192 900 aaKnown RBP7.11□□□□□ -1.27
VPS13B-205ENST00000493587 ASIC1P78348 528 aa7.11□□□□□ -1.27
VPS13B-205ENST00000493587 NR5A1Q13285 461 aa7.11□□□□□ -1.27
VPS13B-205ENST00000493587 ZNF211Q13398 564 aaPredicted RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms