RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 BTAF1O14981 1849 aa4.07□□□□□ -1.76
PTCD3-218ENST00000493430 TECPR2O15040 1411 aa4.06□□□□□ -1.76
PTCD3-218ENST00000493430 DCCP43146 1447 aa4.06□□□□□ -1.76
PTCD3-218ENST00000493430 PRAG1Q86YV5 1406 aa4.06□□□□□ -1.76
PTCD3-218ENST00000493430 PIK3R4Q99570 1358 aa4.06□□□□□ -1.76
PTCD3-218ENST00000493430 ANKRD30BQ9BXX2 1392 aa4.06□□□□□ -1.76
PTCD3-218ENST00000493430 AFF2P51816 1311 aa4.06□□□□□ -1.76
PTCD3-218ENST00000493430 MYO1FO00160 1098 aa4.06□□□□□ -1.76
PTCD3-218ENST00000493430 DTNBO60941 627 aa4.06□□□□□ -1.76
PTCD3-218ENST00000493430 DNAJB5O75953 348 aa4.06□□□□□ -1.76
PTCD3-218ENST00000493430 IL6RP08887 468 aaPredicted RBP4.06□□□□□ -1.76
PTCD3-218ENST00000493430 BOP1Q14137 746 aaKnown RBP4.06□□□□□ -1.76
PTCD3-218ENST00000493430 SUPT20HL1Q3ZLR7 823 aa4.06□□□□□ -1.76
PTCD3-218ENST00000493430 FAM46DQ8NEK8 389 aa4.06□□□□□ -1.76
PTCD3-218ENST00000493430 RGMAQ96B86 450 aa4.06□□□□□ -1.76
PTCD3-218ENST00000493430 ZNF48Q96MX3 618 aaPredicted RBP4.06□□□□□ -1.76
PTCD3-218ENST00000493430 SLC46A1Q96NT5 459 aa4.06□□□□□ -1.76
PTCD3-218ENST00000493430 SIN3AQ96ST3 1273 aa4.06□□□□□ -1.76
PTCD3-218ENST00000493430 PEAK1Q9H792 1746 aa4.06□□□□□ -1.76
PTCD3-218ENST00000493430 PARP4Q9UKK3 1724 aaKnown RBP4.06□□□□□ -1.76
PTCD3-218ENST00000493430 USP54Q70EL1 1684 aa4.06□□□□□ -1.76
PTCD3-218ENST00000493430 CACNA1SQ13698 1873 aa4.05□□□□□ -1.76
PTCD3-218ENST00000493430 LRPPRCP42704 1394 aaKnown RBP4.05□□□□□ -1.76
PTCD3-218ENST00000493430 TNKSO95271 1327 aa4.05□□□□□ -1.76
PTCD3-218ENST00000493430 TOGARAM1Q9Y4F4 1720 aa4.05□□□□□ -1.76
PTCD3-218ENST00000493430 ALG1L2C9J202 215 aa4.05□□□□□ -1.76
PTCD3-218ENST00000493430 KCNAB3O43448 404 aa4.05□□□□□ -1.76
PTCD3-218ENST00000493430 FTLP02792 175 aaPredicted RBP4.05□□□□□ -1.76
PTCD3-218ENST00000493430 ATXN1LP0C7T5 689 aaKnown RBP4.05□□□□□ -1.76
PTCD3-218ENST00000493430 PIM1P11309 404 aaPredicted RBP4.05□□□□□ -1.76
PTCD3-218ENST00000493430 TYRP14679 529 aa4.05□□□□□ -1.76
PTCD3-218ENST00000493430 ATF3P18847 181 aa4.05□□□□□ -1.76
PTCD3-218ENST00000493430 LIPAP38571 399 aa4.05□□□□□ -1.76
PTCD3-218ENST00000493430 PXNP49023 591 aaPredicted RBP4.05□□□□□ -1.76
PTCD3-218ENST00000493430 CDKN1CP49918 316 aaPredicted RBP4.05□□□□□ -1.76
PTCD3-218ENST00000493430 CLCN2P51788 898 aa4.05□□□□□ -1.76
PTCD3-218ENST00000493430 ZNF134P52741 427 aa4.05□□□□□ -1.76
PTCD3-218ENST00000493430 PDE1AP54750 535 aa4.05□□□□□ -1.76
PTCD3-218ENST00000493430 HOXA4Q00056 320 aaPredicted RBP4.05□□□□□ -1.76
PTCD3-218ENST00000493430 IQCB1Q15051 598 aa4.05□□□□□ -1.76
PTCD3-218ENST00000493430 LONRF3Q496Y0 759 aa4.05□□□□□ -1.76
PTCD3-218ENST00000493430 AMOTQ4VCS5 1084 aa4.05□□□□□ -1.76
PTCD3-218ENST00000493430 MEX3CQ5U5Q3 659 aaKnown RBP4.05□□□□□ -1.76
PTCD3-218ENST00000493430 CATSPERGQ6ZRH7 1159 aa4.05□□□□□ -1.76
PTCD3-218ENST00000493430 PPP1R3BQ86XI6 285 aa4.05□□□□□ -1.76
PTCD3-218ENST00000493430 PRR18Q8N4B5 295 aa4.05□□□□□ -1.76
PTCD3-218ENST00000493430 LRRC71Q8N4P6 559 aa4.05□□□□□ -1.76
PTCD3-218ENST00000493430 FAM167AQ96KS9 214 aa4.05□□□□□ -1.76
PTCD3-218ENST00000493430 PTDSS2Q9BVG9 487 aa4.05□□□□□ -1.76
PTCD3-218ENST00000493430 TTYH3Q9C0H2 523 aa4.05□□□□□ -1.76
PTCD3-218ENST00000493430 DUSP22Q9NRW4 184 aa4.05□□□□□ -1.76
PTCD3-218ENST00000493430 LMBRD1Q9NUN5 540 aa4.05□□□□□ -1.76
PTCD3-218ENST00000493430 HESX1Q9UBX0 185 aa4.05□□□□□ -1.76
PTCD3-218ENST00000493430 SERTAD3Q9UJW9 196 aa4.05□□□□□ -1.76
PTCD3-218ENST00000493430 SPEF1Q9Y4P9 236 aa4.05□□□□□ -1.76
PTCD3-218ENST00000493430 TAF1LQ8IZX4 1826 aa4.05□□□□□ -1.76
PTCD3-218ENST00000493430 CASZ1Q86V15 1759 aa4.04□□□□□ -1.76
PTCD3-218ENST00000493430 FAM208AQ9UK61 1670 aaKnown RBP4.04□□□□□ -1.76
PTCD3-218ENST00000493430 PPEF2O14830 753 aa4.04□□□□□ -1.76
PTCD3-218ENST00000493430 ZRANB2O95218 330 aaKnown RBP eCLIP4.04□□□□□ -1.76
PTCD3-218ENST00000493430 AHSGP02765 367 aa4.04□□□□□ -1.76
PTCD3-218ENST00000493430 ENGP17813 658 aa4.04□□□□□ -1.76
PTCD3-218ENST00000493430 PPIFP30405 207 aaKnown RBP4.04□□□□□ -1.76
PTCD3-218ENST00000493430 MMP13P45452 471 aa4.04□□□□□ -1.76
PTCD3-218ENST00000493430 RECQLP46063 649 aaPredicted RBP4.04□□□□□ -1.76
PTCD3-218ENST00000493430 LOXL3P58215 753 aa4.04□□□□□ -1.76
PTCD3-218ENST00000493430 GTF2H3Q13889 308 aa4.04□□□□□ -1.76
PTCD3-218ENST00000493430 SLC2A7Q6PXP3 512 aa4.04□□□□□ -1.76
PTCD3-218ENST00000493430 NAPRTQ6XQN6 538 aa4.04□□□□□ -1.76
PTCD3-218ENST00000493430 USP45Q70EL2 814 aa4.04□□□□□ -1.76
PTCD3-218ENST00000493430 PARS2Q7L3T8 475 aaKnown RBP4.04□□□□□ -1.76
PTCD3-218ENST00000493430 CHSY1Q86X52 802 aa4.04□□□□□ -1.76
PTCD3-218ENST00000493430 PNLDC1Q8NA58 520 aaKnown RBP4.04□□□□□ -1.76
PTCD3-218ENST00000493430 RP9Q8TA86 221 aaKnown RBP4.04□□□□□ -1.76
PTCD3-218ENST00000493430 ASB2Q96Q27 587 aa4.04□□□□□ -1.76
PTCD3-218ENST00000493430 PRAM1Q96QH2 718 aa4.04□□□□□ -1.76
PTCD3-218ENST00000493430 PRSS22Q9GZN4 317 aa4.04□□□□□ -1.76
PTCD3-218ENST00000493430 ANLNQ9NQW6 1124 aa4.04□□□□□ -1.76
PTCD3-218ENST00000493430 PNPOQ9NVS9 261 aa4.04□□□□□ -1.76
PTCD3-218ENST00000493430 ADAMTS5Q9UNA0 930 aa4.04□□□□□ -1.76
PTCD3-218ENST00000493430 PCDHA1Q9Y5I3 950 aa4.04□□□□□ -1.76
PTCD3-218ENST00000493430 BCL9LQ86UU0 1499 aa4.04□□□□□ -1.76
PTCD3-218ENST00000493430 TNS3Q68CZ2 1445 aa4.04□□□□□ -1.76
PTCD3-218ENST00000493430 CYP2D7A0A087X1C5 515 aa4.03□□□□□ -1.76
PTCD3-218ENST00000493430 KCNU1A8MYU2 1149 aa4.03□□□□□ -1.76
PTCD3-218ENST00000493430 ADAMTS3O15072 1205 aa4.03□□□□□ -1.76
PTCD3-218ENST00000493430 DCLK1O15075 740 aa4.03□□□□□ -1.76
PTCD3-218ENST00000493430 TOP3BO95985 862 aaKnown RBP4.03□□□□□ -1.76
PTCD3-218ENST00000493430 FESP07332 822 aa4.03□□□□□ -1.76
PTCD3-218ENST00000493430 NPSP0C0P6 89 aa4.03□□□□□ -1.76
PTCD3-218ENST00000493430 CCT4P50991 539 aaKnown RBP4.03□□□□□ -1.76
PTCD3-218ENST00000493430 MAP2K6P52564 334 aa4.03□□□□□ -1.76
PTCD3-218ENST00000493430 CYP4F2P78329 520 aa4.03□□□□□ -1.76
PTCD3-218ENST00000493430 SP2Q02086 613 aa4.03□□□□□ -1.76
PTCD3-218ENST00000493430 TBC1D25Q3MII6 688 aa4.03□□□□□ -1.76
PTCD3-218ENST00000493430 CCDC157Q569K6 752 aa4.03□□□□□ -1.76
PTCD3-218ENST00000493430 ARHGAP40Q5TG30 622 aa4.03□□□□□ -1.76
PTCD3-218ENST00000493430 TRIM72Q6ZMU5 477 aa4.03□□□□□ -1.76
PTCD3-218ENST00000493430 GALNT16Q8N428 558 aa4.03□□□□□ -1.76
PTCD3-218ENST00000493430 PRPF38AQ8NAV1 312 aaKnown RBP4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms