RNA–Protein interactions for RNA: ENST00000492244.5

FDPS-217, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 3

Gene FDPS, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-217ENST00000492244 XXYLT1Q8NBI6 393 aa12.52□□□□□ -0.41
FDPS-217ENST00000492244 TXNDC5Q8NBS9 432 aaKnown RBP12.52□□□□□ -0.41
FDPS-217ENST00000492244 B3GALNT2Q8NCR0 500 aa12.52□□□□□ -0.41
FDPS-217ENST00000492244 GOLGA5Q8TBA6 731 aa12.52□□□□□ -0.41
FDPS-217ENST00000492244 FBXO32Q969P5 355 aa12.52□□□□□ -0.41
FDPS-217ENST00000492244 DUSP9Q99956 384 aaKnown RBP12.52□□□□□ -0.41
FDPS-217ENST00000492244 ADAM33Q9BZ11 813 aa12.52□□□□□ -0.41
FDPS-217ENST00000492244 TRIM9Q9C026 710 aa12.52□□□□□ -0.41
FDPS-217ENST00000492244 DNAI2Q9GZS0 605 aa12.52□□□□□ -0.41
FDPS-217ENST00000492244 DMAP1Q9NPF5 467 aaPredicted RBP12.52□□□□□ -0.41
FDPS-217ENST00000492244 AGPAT3Q9NRZ7 376 aa12.52□□□□□ -0.41
FDPS-217ENST00000492244 COMMD8Q9NX08 183 aa12.52□□□□□ -0.41
FDPS-217ENST00000492244 INVSQ9Y283 1065 aa12.52□□□□□ -0.41
FDPS-217ENST00000492244 PTPRJQ12913 1337 aa12.52□□□□□ -0.41
FDPS-217ENST00000492244 TBC1D3BA6NDS4 549 aa12.51□□□□□ -0.41
FDPS-217ENST00000492244 SYT1P21579 422 aa12.51□□□□□ -0.41
FDPS-217ENST00000492244 TIE1P35590 1138 aa12.51□□□□□ -0.41
FDPS-217ENST00000492244 KDSRQ06136 332 aa12.51□□□□□ -0.41
FDPS-217ENST00000492244 CYP24A1Q07973 514 aa12.51□□□□□ -0.41
FDPS-217ENST00000492244 UAP1L1Q3KQV9 507 aa12.51□□□□□ -0.41
FDPS-217ENST00000492244 HECTD3Q5T447 861 aa12.51□□□□□ -0.41
FDPS-217ENST00000492244 HDDC3Q8N4P3 179 aa12.51□□□□□ -0.41
FDPS-217ENST00000492244 IL17RCQ8NAC3 791 aa12.51□□□□□ -0.41
FDPS-217ENST00000492244 HMGB4Q8WW32 186 aa12.51□□□□□ -0.41
FDPS-217ENST00000492244 CCDC127Q96BQ5 260 aa12.51□□□□□ -0.41
FDPS-217ENST00000492244 SMARCD1Q96GM5 515 aa12.51□□□□□ -0.41
FDPS-217ENST00000492244 INTS4Q96HW7 963 aaKnown RBP12.51□□□□□ -0.41
FDPS-217ENST00000492244 ZNF396Q96N95 335 aaPredicted RBP12.51□□□□□ -0.41
FDPS-217ENST00000492244 MED10Q9BTT4 135 aa12.51□□□□□ -0.41
FDPS-217ENST00000492244 FGFBP2Q9BYJ0 223 aa12.51□□□□□ -0.41
FDPS-217ENST00000492244 PANK2Q9BZ23 570 aa12.51□□□□□ -0.41
FDPS-217ENST00000492244 KBTBD4Q9NVX7 518 aa12.51□□□□□ -0.41
FDPS-217ENST00000492244 DEC1Q9P2X7 70 aa12.51□□□□□ -0.41
FDPS-217ENST00000492244 PI4KAP42356 2102 aa12.5□□□□□ -0.41
FDPS-217ENST00000492244 A0A0A0MRY4 1105 aa12.5□□□□□ -0.41
FDPS-217ENST00000492244 TCRBV21S2A2A0A5A6 115 aa12.5□□□□□ -0.41
FDPS-217ENST00000492244 HOXC11O43248 304 aaPredicted RBP12.5□□□□□ -0.41
FDPS-217ENST00000492244 ZNF217O75362 1048 aa12.5□□□□□ -0.41
FDPS-217ENST00000492244 CENPBP07199 599 aaPredicted RBP12.5□□□□□ -0.41
FDPS-217ENST00000492244 BCKDHBP21953 392 aa12.5□□□□□ -0.41
FDPS-217ENST00000492244 NASPP49321 788 aaPredicted RBP12.5□□□□□ -0.41
FDPS-217ENST00000492244 CYP2J2P51589 502 aa12.5□□□□□ -0.41
FDPS-217ENST00000492244 GFPT1Q06210 699 aaPredicted RBP12.5□□□□□ -0.41
FDPS-217ENST00000492244 BIRC3Q13489 604 aa12.5□□□□□ -0.41
FDPS-217ENST00000492244 HNRNPDQ14103 355 aaKnown RBP12.5□□□□□ -0.41
FDPS-217ENST00000492244 GAB4Q2WGN9 574 aa12.5□□□□□ -0.41
FDPS-217ENST00000492244 ZNF699Q32M78 642 aa12.5□□□□□ -0.41
FDPS-217ENST00000492244 SDE2Q6IQ49 451 aa12.5□□□□□ -0.41
FDPS-217ENST00000492244 CNNM4Q6P4Q7 775 aa12.5□□□□□ -0.41
FDPS-217ENST00000492244 RHBDF2Q6PJF5 856 aa12.5□□□□□ -0.41
FDPS-217ENST00000492244 ZNF513Q8N8E2 541 aaPredicted RBP12.5□□□□□ -0.41
FDPS-217ENST00000492244 ZNF507Q8TCN5 953 aa12.5□□□□□ -0.41
FDPS-217ENST00000492244 FAM84AQ96KN4 292 aa12.5□□□□□ -0.41
FDPS-217ENST00000492244 USP28Q96RU2 1077 aa12.5□□□□□ -0.41
FDPS-217ENST00000492244 MRPL45Q9BRJ2 306 aaKnown RBP12.5□□□□□ -0.41
FDPS-217ENST00000492244 ZNF518BQ9C0D4 1074 aa12.5□□□□□ -0.41
FDPS-217ENST00000492244 RNF38Q9H0F5 515 aa12.5□□□□□ -0.41
FDPS-217ENST00000492244 FBXO44Q9H4M3 255 aa12.5□□□□□ -0.41
FDPS-217ENST00000492244 NXF1Q9UBU9 619 aaKnown RBP12.5□□□□□ -0.41
FDPS-217ENST00000492244 ATRXP46100 2492 aa12.49□□□□□ -0.41
FDPS-217ENST00000492244 ASCC3Q8N3C0 2202 aaKnown RBP12.49□□□□□ -0.41
FDPS-217ENST00000492244 UPK3BL1B0FP48 263 aa12.49□□□□□ -0.41
FDPS-217ENST00000492244 UPK3BL2E5RIL1 263 aa12.49□□□□□ -0.41
FDPS-217ENST00000492244 H0Y626 953 aa12.49□□□□□ -0.41
FDPS-217ENST00000492244 SGK1O00141 431 aa12.49□□□□□ -0.41
FDPS-217ENST00000492244 SPTLC2O15270 562 aa12.49□□□□□ -0.41
FDPS-217ENST00000492244 PPP6R2O75170 966 aa12.49□□□□□ -0.41
FDPS-217ENST00000492244 TRIM16O95361 564 aa12.49□□□□□ -0.41
FDPS-217ENST00000492244 CFIP05156 583 aa12.49□□□□□ -0.41
FDPS-217ENST00000492244 PDIA4P13667 645 aaKnown RBP12.49□□□□□ -0.41
FDPS-217ENST00000492244 KIR2DL1P43626 348 aaPredicted RBP12.49□□□□□ -0.41
FDPS-217ENST00000492244 IRX4P78413 519 aa12.49□□□□□ -0.41
FDPS-217ENST00000492244 ZXDBP98169 803 aa12.49□□□□□ -0.41
FDPS-217ENST00000492244 E2F5Q15329 346 aa12.49□□□□□ -0.41
FDPS-217ENST00000492244 DUOXA1Q1HG43 343 aa12.49□□□□□ -0.41
FDPS-217ENST00000492244 ANO4Q32M45 955 aa12.49□□□□□ -0.41
FDPS-217ENST00000492244 ZNF667Q5HYK9 610 aa12.49□□□□□ -0.41
FDPS-217ENST00000492244 LY6G5CQ5SRR4 150 aa12.49□□□□□ -0.41
FDPS-217ENST00000492244 C10orf76Q5T2E6 689 aa12.49□□□□□ -0.41
FDPS-217ENST00000492244 SNX30Q5VWJ9 437 aa12.49□□□□□ -0.41
FDPS-217ENST00000492244 SLC23A3Q6PIS1 610 aa12.49□□□□□ -0.41
FDPS-217ENST00000492244 TMEM92Q6UXU6 159 aa12.49□□□□□ -0.41
FDPS-217ENST00000492244 EPM2AIP1Q7L775 607 aaPredicted RBP12.49□□□□□ -0.41
FDPS-217ENST00000492244 FAM35AQ86V20 835 aa12.49□□□□□ -0.41
FDPS-217ENST00000492244 C12orf56Q8IXR9 622 aa12.49□□□□□ -0.41
FDPS-217ENST00000492244 TERB1Q8NA31 727 aa12.49□□□□□ -0.41
FDPS-217ENST00000492244 KDF1Q8NAX2 398 aaPredicted RBP12.49□□□□□ -0.41
FDPS-217ENST00000492244 RDH13Q8NBN7 331 aa12.49□□□□□ -0.41
FDPS-217ENST00000492244 XPO6Q96QU8 1125 aaKnown RBP12.49□□□□□ -0.41
FDPS-217ENST00000492244 VRTNQ9H8Y1 702 aa12.49□□□□□ -0.41
FDPS-217ENST00000492244 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.49□□□□□ -0.411e-6■■■■■ 126.5
FDPS-217ENST00000492244 SPHK2Q9NRA0 654 aa12.49□□□□□ -0.41
FDPS-217ENST00000492244 TFIP11Q9UBB9 837 aaKnown RBP12.49□□□□□ -0.41
FDPS-217ENST00000492244 SUSD2Q9UGT4 822 aa12.49□□□□□ -0.41
FDPS-217ENST00000492244 LSM7Q9UK45 103 aaKnown RBP12.49□□□□□ -0.41
FDPS-217ENST00000492244 GON4LQ3T8J9 2241 aa12.49□□□□□ -0.41
FDPS-217ENST00000492244 A0A087X0B3 334 aa12.48□□□□□ -0.41
FDPS-217ENST00000492244 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.48□□□□□ -0.41
FDPS-217ENST00000492244 PATE3B3GLJ2 98 aa12.48□□□□□ -0.41
FDPS-217ENST00000492244 CDX4O14627 284 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms