RNA–Protein interactions for RNA: ENST00000492190.5

LMNB1-206, Transcript of lamin B1, humanhuman

TSL 3

Gene LMNB1, Length 738 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-206ENST00000492190 VPS16Q9H269 839 aa18.7■□□□□ 0.58
LMNB1-206ENST00000492190 CCSER2Q9H7U1 834 aa18.7■□□□□ 0.58
LMNB1-206ENST00000492190 NMUR1Q9HB89 426 aa18.7■□□□□ 0.58
LMNB1-206ENST00000492190 ACP6Q9NPH0 428 aa18.7■□□□□ 0.58
LMNB1-206ENST00000492190 HEBP1Q9NRV9 189 aa18.7■□□□□ 0.58
LMNB1-206ENST00000492190 OSER1Q9NX31 292 aa18.7■□□□□ 0.58
LMNB1-206ENST00000492190 KIAA1257Q9ULG3 409 aa18.7■□□□□ 0.58
LMNB1-206ENST00000492190 SCML2Q9UQR0 700 aa18.7■□□□□ 0.58
LMNB1-206ENST00000492190 USP3Q9Y6I4 520 aa18.7■□□□□ 0.58
LMNB1-206ENST00000492190 ZNF263O14978 683 aa18.69■□□□□ 0.58
LMNB1-206ENST00000492190 PI15O43692 258 aa18.69■□□□□ 0.58
LMNB1-206ENST00000492190 GABBR2O75899 941 aa18.69■□□□□ 0.58
LMNB1-206ENST00000492190 KRT5P13647 590 aa18.69■□□□□ 0.58
LMNB1-206ENST00000492190 PFKPQ01813 784 aa18.69■□□□□ 0.58
LMNB1-206ENST00000492190 USP4Q13107 963 aa18.69■□□□□ 0.58
LMNB1-206ENST00000492190 MLF2Q15773 248 aaPredicted RBP18.69■□□□□ 0.58
LMNB1-206ENST00000492190 ZNF77Q15935 545 aa18.69■□□□□ 0.58
LMNB1-206ENST00000492190 RAB41Q5JT25 222 aa18.69■□□□□ 0.58
LMNB1-206ENST00000492190 DHX40Q8IX18 779 aaKnown RBP18.69■□□□□ 0.58
LMNB1-206ENST00000492190 PDZD8Q8NEN9 1154 aa18.69■□□□□ 0.58
LMNB1-206ENST00000492190 SHC3Q92529 594 aa18.69■□□□□ 0.58
LMNB1-206ENST00000492190 DNASE1L2Q92874 299 aa18.69■□□□□ 0.58
LMNB1-206ENST00000492190 IRF7Q92985 503 aa18.69■□□□□ 0.58
LMNB1-206ENST00000492190 DDX23Q9BUQ8 820 aaKnown RBP18.69■□□□□ 0.58
LMNB1-206ENST00000492190 UBXN6Q9BZV1 441 aa18.69■□□□□ 0.58
LMNB1-206ENST00000492190 FBXO44Q9H4M3 255 aa18.69■□□□□ 0.58
LMNB1-206ENST00000492190 TBC1D17Q9HA65 648 aa18.69■□□□□ 0.58
LMNB1-206ENST00000492190 KIF9Q9HAQ2 790 aa18.69■□□□□ 0.58
LMNB1-206ENST00000492190 TRPV5Q9NQA5 729 aa18.69■□□□□ 0.58
LMNB1-206ENST00000492190 ARHGAP26Q9UNA1 814 aa18.69■□□□□ 0.58
LMNB1-206ENST00000492190 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.69■□□□□ 0.58
LMNB1-206ENST00000492190 SYCE3A1L190 88 aa18.68■□□□□ 0.58
LMNB1-206ENST00000492190 PES1O00541 588 aaKnown RBP18.68■□□□□ 0.58
LMNB1-206ENST00000492190 COCHO43405 550 aa18.68■□□□□ 0.58
LMNB1-206ENST00000492190 PFKLP17858 780 aa18.68■□□□□ 0.58
LMNB1-206ENST00000492190 CD72P21854 359 aa18.68■□□□□ 0.58
LMNB1-206ENST00000492190 BCAT1P54687 386 aa18.68■□□□□ 0.58
LMNB1-206ENST00000492190 MFAP3P55082 362 aa18.68■□□□□ 0.58
LMNB1-206ENST00000492190 STARD6P59095 220 aa18.68■□□□□ 0.58
LMNB1-206ENST00000492190 SLC7A9P82251 487 aa18.68■□□□□ 0.58
LMNB1-206ENST00000492190 TNK2Q07912 1038 aa18.68■□□□□ 0.58
LMNB1-206ENST00000492190 BST2Q10589 180 aaKnown RBP18.68■□□□□ 0.58
LMNB1-206ENST00000492190 CNGA2Q16280 664 aa18.68■□□□□ 0.58
LMNB1-206ENST00000492190 ARHGAP29Q52LW3 1261 aa18.68■□□□□ 0.58
LMNB1-206ENST00000492190 ENOSF1Q7L5Y1 443 aa18.68■□□□□ 0.58
LMNB1-206ENST00000492190 SCD5Q86SK9 330 aa18.68■□□□□ 0.58
LMNB1-206ENST00000492190 YAF2Q8IY57 180 aa18.68■□□□□ 0.58
LMNB1-206ENST00000492190 TMEM105Q8N8V8 129 aa18.68■□□□□ 0.58
LMNB1-206ENST00000492190 FLCNQ8NFG4 579 aa18.68■□□□□ 0.58
LMNB1-206ENST00000492190 SH3RF2Q8TEC5 729 aa18.68■□□□□ 0.58
LMNB1-206ENST00000492190 ZFRQ96KR1 1074 aaKnown RBP18.68■□□□□ 0.58
LMNB1-206ENST00000492190 FAM83CQ9BQN1 747 aa18.68■□□□□ 0.58
LMNB1-206ENST00000492190 FOXQ1Q9C009 403 aa18.68■□□□□ 0.58
LMNB1-206ENST00000492190 MFSD1Q9H3U5 465 aa18.68■□□□□ 0.58
LMNB1-206ENST00000492190 LIMA1Q9UHB6 759 aaKnown RBP18.68■□□□□ 0.58
LMNB1-206ENST00000492190 DNAJC12Q9UKB3 198 aa18.68■□□□□ 0.58
LMNB1-206ENST00000492190 A0A1W2PQH9 124 aa18.67■□□□□ 0.58
LMNB1-206ENST00000492190 XPO1O14980 1071 aaKnown RBP18.67■□□□□ 0.58
LMNB1-206ENST00000492190 PNMA6AP0CW24 399 aaPredicted RBP18.67■□□□□ 0.58
LMNB1-206ENST00000492190 ATP1A3P13637 1013 aa18.67■□□□□ 0.58
LMNB1-206ENST00000492190 TCF3P15923 654 aa18.67■□□□□ 0.58
LMNB1-206ENST00000492190 AVPR2P30518 371 aa18.67■□□□□ 0.58
LMNB1-206ENST00000492190 KLK7P49862 253 aa18.67■□□□□ 0.58
LMNB1-206ENST00000492190 COPB1P53618 953 aaKnown RBP18.67■□□□□ 0.58
LMNB1-206ENST00000492190 HECTD3Q5T447 861 aa18.67■□□□□ 0.58
LMNB1-206ENST00000492190 KLHDC7AQ5VTJ3 777 aa18.67■□□□□ 0.58
LMNB1-206ENST00000492190 TRIM68Q6AZZ1 485 aa18.67■□□□□ 0.58
LMNB1-206ENST00000492190 ASTLQ6HA08 431 aaPredicted RBP18.67■□□□□ 0.58
LMNB1-206ENST00000492190 BHLHA9Q7RTU4 235 aa18.67■□□□□ 0.58
LMNB1-206ENST00000492190 CCDC186Q7Z3E2 898 aa18.67■□□□□ 0.58
LMNB1-206ENST00000492190 BPIFA3Q9BQP9 254 aa18.67■□□□□ 0.58
LMNB1-206ENST00000492190 HPS4Q9NQG7 708 aa18.67■□□□□ 0.58
LMNB1-206ENST00000492190 GKN1Q9NS71 199 aa18.67■□□□□ 0.58
LMNB1-206ENST00000492190 SMPD4Q9NXE4 827 aa18.67■□□□□ 0.58
LMNB1-206ENST00000492190 GTSE1Q9NYZ3 720 aa18.67■□□□□ 0.58
LMNB1-206ENST00000492190 HESX1Q9UBX0 185 aa18.67■□□□□ 0.58
LMNB1-206ENST00000492190 FHOD1Q9Y613 1164 aa18.67■□□□□ 0.58
LMNB1-206ENST00000492190 CPQQ9Y646 472 aa18.67■□□□□ 0.58
LMNB1-206ENST00000492190 OTOL1A6NHN0 477 aaPredicted RBP18.66■□□□□ 0.58
LMNB1-206ENST00000492190 LRRC10BA6NIK2 292 aa18.66■□□□□ 0.58
LMNB1-206ENST00000492190 M0QYV0 167 aa18.66■□□□□ 0.58
LMNB1-206ENST00000492190 FOXN3O00409 490 aaPredicted RBP18.66■□□□□ 0.58
LMNB1-206ENST00000492190 TBX18O95935 607 aa18.66■□□□□ 0.58
LMNB1-206ENST00000492190 AOC1P19801 751 aa18.66■□□□□ 0.58
LMNB1-206ENST00000492190 PTMSP20962 102 aa18.66■□□□□ 0.58
LMNB1-206ENST00000492190 PLA2G4AP47712 749 aa18.66■□□□□ 0.58
LMNB1-206ENST00000492190 SOX9P48436 509 aa18.66■□□□□ 0.58
LMNB1-206ENST00000492190 PRKCQQ04759 706 aa18.66■□□□□ 0.58
LMNB1-206ENST00000492190 MTF1Q14872 753 aa18.66■□□□□ 0.58
LMNB1-206ENST00000492190 PMF1Q6P1K2 205 aa18.66■□□□□ 0.58
LMNB1-206ENST00000492190 TPRG1Q6ZUI0 275 aa18.66■□□□□ 0.58
LMNB1-206ENST00000492190 SUGP1Q8IWZ8 645 aaKnown RBP18.66■□□□□ 0.58
LMNB1-206ENST00000492190 TTC16Q8NEE8 873 aa18.66■□□□□ 0.58
LMNB1-206ENST00000492190 TTC8Q8TAM2 541 aa18.66■□□□□ 0.58
LMNB1-206ENST00000492190 SLC35F5Q8WV83 523 aa18.66■□□□□ 0.58
LMNB1-206ENST00000492190 NDRG1Q92597 394 aaKnown RBP18.66■□□□□ 0.58
LMNB1-206ENST00000492190 SECISBP2LQ93073 1101 aaKnown RBP18.66■□□□□ 0.58
LMNB1-206ENST00000492190 WBP2Q969T9 261 aa18.66■□□□□ 0.58
LMNB1-206ENST00000492190 FAM81BQ96LP2 452 aa18.66■□□□□ 0.58
LMNB1-206ENST00000492190 LSM14BQ9BX40 385 aaKnown RBP18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms