RNA–Protein interactions for RNA: ENST00000491407.1

PPP1R35-205, Transcript of protein phosphatase 1 regulatory subunit 35, human

TSL 5

Gene PPP1R35, Length 942 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP1R35-205	ENST00000491407	SNX25	Q9H3E2	840 aa		28.86	■■■□□ 2.21
PPP1R35-205	ENST00000491407	TMEM9B	Q9NQ34	198 aa		28.86	■■■□□ 2.21
PPP1R35-205	ENST00000491407	PCDHA5	Q9Y5H7	936 aa		28.86	■■■□□ 2.21
PPP1R35-205	ENST00000491407	GADD45B	O75293	160 aa	Predicted RBP	28.85	■■■□□ 2.21
PPP1R35-205	ENST00000491407	TACC1	O75410	805 aa		28.85	■■■□□ 2.21
PPP1R35-205	ENST00000491407	CLSTN1	O94985	981 aa		28.85	■■■□□ 2.21
PPP1R35-205	ENST00000491407	SMC2	O95347	1197 aa		28.85	■■■□□ 2.21
PPP1R35-205	ENST00000491407	VNN1	O95497	513 aa		28.85	■■■□□ 2.21
PPP1R35-205	ENST00000491407	CKM	P06732	381 aa		28.85	■■■□□ 2.21
PPP1R35-205	ENST00000491407	USP17L7	P0C7H9	530 aa		28.85	■■■□□ 2.21
PPP1R35-205	ENST00000491407	RPL13	P26373	211 aa	Known RBP	28.85	■■■□□ 2.21
PPP1R35-205	ENST00000491407	RPL10A	P62906	217 aa	Known RBP	28.85	■■■□□ 2.21
PPP1R35-205	ENST00000491407	NR1H3	Q13133	447 aa		28.85	■■■□□ 2.21
PPP1R35-205	ENST00000491407	ZCWPW2	Q504Y3	356 aa		28.85	■■■□□ 2.21
PPP1R35-205	ENST00000491407	C1orf220	Q5T0J3	134 aa		28.85	■■■□□ 2.21
PPP1R35-205	ENST00000491407	C11orf74	Q86VG3	221 aa		28.85	■■■□□ 2.21
PPP1R35-205	ENST00000491407	OR6B3	Q8NGW1	331 aa		28.85	■■■□□ 2.21
PPP1R35-205	ENST00000491407	MYLPF	Q96A32	169 aa		28.85	■■■□□ 2.21
PPP1R35-205	ENST00000491407	TRAV19	A0A0A6YYK7	116 aa		28.84	■■■□□ 2.21
PPP1R35-205	ENST00000491407	MAPK13	O15264	365 aa		28.84	■■■□□ 2.21
PPP1R35-205	ENST00000491407	NOL4	O94818	638 aa		28.84	■■■□□ 2.21
PPP1R35-205	ENST00000491407	PRCP	P42785	496 aa		28.84	■■■□□ 2.21
PPP1R35-205	ENST00000491407	VAMP7	P51809	220 aa		28.84	■■■□□ 2.21
PPP1R35-205	ENST00000491407	USP4	Q13107	963 aa		28.84	■■■□□ 2.21
PPP1R35-205	ENST00000491407	ADAM9	Q13443	819 aa		28.84	■■■□□ 2.21
PPP1R35-205	ENST00000491407	ZNF699	Q32M78	642 aa		28.84	■■■□□ 2.21
PPP1R35-205	ENST00000491407	EML3	Q32P44	896 aa		28.84	■■■□□ 2.21
PPP1R35-205	ENST00000491407	ZACN	Q401N2	412 aa		28.84	■■■□□ 2.21
PPP1R35-205	ENST00000491407	CFAP221	Q4G0U5	840 aa		28.84	■■■□□ 2.21
PPP1R35-205	ENST00000491407	ZNF658	Q5TYW1	1059 aa	Predicted RBP	28.84	■■■□□ 2.21
PPP1R35-205	ENST00000491407	KDF1	Q8NAX2	398 aa	Predicted RBP	28.84	■■■□□ 2.21
PPP1R35-205	ENST00000491407	CCDC26	Q8TAB7	109 aa		28.84	■■■□□ 2.21
PPP1R35-205	ENST00000491407	SMARCE1	Q969G3	411 aa		28.84	■■■□□ 2.21
PPP1R35-205	ENST00000491407	GSDMA	Q96QA5	445 aa		28.84	■■■□□ 2.21
PPP1R35-205	ENST00000491407	SLC22A12	Q96S37	553 aa		28.84	■■■□□ 2.21
PPP1R35-205	ENST00000491407	HELZ	P42694	1942 aa	Known RBP	28.83	■■■□□ 2.21
PPP1R35-205	ENST00000491407	FAM163B	P0C2L3	166 aa		28.83	■■■□□ 2.21
PPP1R35-205	ENST00000491407	CEACAM1	P13688	526 aa		28.83	■■■□□ 2.21
PPP1R35-205	ENST00000491407	C4orf50	Q6ZRC1	276 aa		28.83	■■■□□ 2.21
PPP1R35-205	ENST00000491407	SV2A	Q7L0J3	742 aa		28.83	■■■□□ 2.21
PPP1R35-205	ENST00000491407	CYP2U1	Q7Z449	544 aa		28.83	■■■□□ 2.21
PPP1R35-205	ENST00000491407	SCN4B	Q8IWT1	228 aa		28.83	■■■□□ 2.21
PPP1R35-205	ENST00000491407	FAM186B	Q8IYM0	893 aa		28.83	■■■□□ 2.21
PPP1R35-205	ENST00000491407	TRMT2B	Q96GJ1	504 aa	Known RBP	28.83	■■■□□ 2.21
PPP1R35-205	ENST00000491407	FUBP3	Q96I24	572 aa	Known RBP eCLIP	28.83	■■■□□ 2.21
PPP1R35-205	ENST00000491407	ADAM33	Q9BZ11	813 aa		28.83	■■■□□ 2.21
PPP1R35-205	ENST00000491407	SMYD3	Q9H7B4	428 aa		28.83	■■■□□ 2.21
PPP1R35-205	ENST00000491407	VRTN	Q9H8Y1	702 aa		28.83	■■■□□ 2.21
PPP1R35-205	ENST00000491407	MAGEC2	Q9UBF1	373 aa	Predicted RBP	28.83	■■■□□ 2.21
PPP1R35-205	ENST00000491407	HOOK1	Q9UJC3	728 aa	Known RBP	28.83	■■■□□ 2.21
PPP1R35-205	ENST00000491407	WASF3	Q9UPY6	502 aa		28.83	■■■□□ 2.21
PPP1R35-205	ENST00000491407	PATE3	B3GLJ2	98 aa		28.82	■■■□□ 2.2
PPP1R35-205	ENST00000491407	IKBKB	O14920	756 aa		28.82	■■■□□ 2.2
PPP1R35-205	ENST00000491407	TOP3B	O95985	862 aa	Known RBP	28.82	■■■□□ 2.2
PPP1R35-205	ENST00000491407	CSRP1	P21291	193 aa	Known RBP	28.82	■■■□□ 2.2
PPP1R35-205	ENST00000491407	PSMC2	P35998	433 aa	Known RBP	28.82	■■■□□ 2.2
PPP1R35-205	ENST00000491407	CDH8	P55286	799 aa		28.82	■■■□□ 2.2
PPP1R35-205	ENST00000491407	ZNF667	Q5HYK9	610 aa		28.82	■■■□□ 2.2
PPP1R35-205	ENST00000491407	ANO7	Q6IWH7	933 aa		28.82	■■■□□ 2.2
PPP1R35-205	ENST00000491407	SPATA20	Q8TB22	786 aa		28.82	■■■□□ 2.2
PPP1R35-205	ENST00000491407	EEF2KMT	Q96G04	330 aa		28.82	■■■□□ 2.2
PPP1R35-205	ENST00000491407	MYRFL	Q96LU7	910 aa		28.82	■■■□□ 2.2
PPP1R35-205	ENST00000491407	DPEP3	Q9H4B8	488 aa		28.82	■■■□□ 2.2
PPP1R35-205	ENST00000491407	CDX4	O14627	284 aa	Predicted RBP	28.81	■■■□□ 2.2
PPP1R35-205	ENST00000491407	TRIM49	P0CI25	452 aa		28.81	■■■□□ 2.2
PPP1R35-205	ENST00000491407	TRIM49C	P0CI26	452 aa		28.81	■■■□□ 2.2
PPP1R35-205	ENST00000491407	BCKDHB	P21953	392 aa		28.81	■■■□□ 2.2
PPP1R35-205	ENST00000491407	SEC13	P55735	322 aa		28.81	■■■□□ 2.2
PPP1R35-205	ENST00000491407	CYP27A1	Q02318	531 aa		28.81	■■■□□ 2.2
PPP1R35-205	ENST00000491407	COL9A2	Q14055	689 aa	Predicted RBP	28.81	■■■□□ 2.2
PPP1R35-205	ENST00000491407	MAPRE1	Q15691	268 aa	Known RBP	28.81	■■■□□ 2.2
PPP1R35-205	ENST00000491407	EDRF1	Q3B7T1	1238 aa		28.81	■■■□□ 2.2
PPP1R35-205	ENST00000491407	UAP1L1	Q3KQV9	507 aa		28.81	■■■□□ 2.2
PPP1R35-205	ENST00000491407	C2orf27A	Q580R0	203 aa		28.81	■■■□□ 2.2
PPP1R35-205	ENST00000491407	MDH1B	Q5I0G3	518 aa		28.81	■■■□□ 2.2
PPP1R35-205	ENST00000491407	SCARA5	Q6ZMJ2	495 aa		28.81	■■■□□ 2.2
PPP1R35-205	ENST00000491407	INTS8	Q75QN2	995 aa	Known RBP	28.81	■■■□□ 2.2
PPP1R35-205	ENST00000491407	ARL14EP	Q8N8R7	260 aa	Predicted RBP	28.81	■■■□□ 2.2
PPP1R35-205	ENST00000491407	MYCBPAP	Q8TBZ2	947 aa		28.81	■■■□□ 2.2
PPP1R35-205	ENST00000491407	SH3RF2	Q8TEC5	729 aa		28.81	■■■□□ 2.2
PPP1R35-205	ENST00000491407	USP33	Q8TEY7	942 aa		28.81	■■■□□ 2.2
PPP1R35-205	ENST00000491407	PCED1B	Q96HM7	432 aa		28.81	■■■□□ 2.2
PPP1R35-205	ENST00000491407	PTPRD	P23468	1912 aa		28.81	■■■□□ 2.2
PPP1R35-205	ENST00000491407		A8MXQ7	604 aa		28.8	■■■□□ 2.2
PPP1R35-205	ENST00000491407	KRT13	P13646	458 aa		28.8	■■■□□ 2.2
PPP1R35-205	ENST00000491407	BDNF	P23560	247 aa		28.8	■■■□□ 2.2
PPP1R35-205	ENST00000491407	DHPS	P49366	369 aa	Predicted RBP	28.8	■■■□□ 2.2
PPP1R35-205	ENST00000491407	IRX4	P78413	519 aa		28.8	■■■□□ 2.2
PPP1R35-205	ENST00000491407	SGSM1	Q2NKQ1	1148 aa		28.8	■■■□□ 2.2
PPP1R35-205	ENST00000491407	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	28.8	■■■□□ 2.2
PPP1R35-205	ENST00000491407	LINC00597	Q9H2U6	94 aa		28.8	■■■□□ 2.2
PPP1R35-205	ENST00000491407	BAHCC1	Q9P281	2608 aa		28.8	■■■□□ 2.2
PPP1R35-205	ENST00000491407	HLA-DRA	P01903	254 aa		28.79	■■■□□ 2.2
PPP1R35-205	ENST00000491407	PTPN1	P18031	435 aa	Known RBP	28.79	■■■□□ 2.2
PPP1R35-205	ENST00000491407	MAGEA11	P43364	429 aa		28.79	■■■□□ 2.2
PPP1R35-205	ENST00000491407	GCLM	P48507	274 aa		28.79	■■■□□ 2.2
PPP1R35-205	ENST00000491407	PPP3CA	Q08209	521 aa		28.79	■■■□□ 2.2
PPP1R35-205	ENST00000491407	ISM2	Q6H9L7	571 aa		28.79	■■■□□ 2.2
PPP1R35-205	ENST00000491407	RASSF3	Q86WH2	238 aa		28.79	■■■□□ 2.2
PPP1R35-205	ENST00000491407	TTC30A	Q86WT1	665 aa		28.79	■■■□□ 2.2

Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms