RNA–Protein interactions for RNA: ENST00000491387.1

APOBEC3F-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 4

Gene APOBEC3F, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-204ENST00000491387 ZDHHC9Q9Y397 364 aa9□□□□□ -0.97
APOBEC3F-204ENST00000491387 R3HCC1Q9Y3T6 440 aaKnown RBP9□□□□□ -0.97
APOBEC3F-204ENST00000491387 NME7Q9Y5B8 376 aa9□□□□□ -0.97
APOBEC3F-204ENST00000491387 CPQQ9Y646 472 aa9□□□□□ -0.97
APOBEC3F-204ENST00000491387 DSPP15924 2871 aaKnown RBP8.99□□□□□ -0.97
APOBEC3F-204ENST00000491387 ANTXRLA6NF34 631 aa8.99□□□□□ -0.97
APOBEC3F-204ENST00000491387 C1QTNF9BB2RNN3 333 aa8.99□□□□□ -0.97
APOBEC3F-204ENST00000491387 SGK1O00141 431 aa8.99□□□□□ -0.97
APOBEC3F-204ENST00000491387 SPTLC2O15270 562 aa8.99□□□□□ -0.97
APOBEC3F-204ENST00000491387 HOXC11O43248 304 aaPredicted RBP8.99□□□□□ -0.97
APOBEC3F-204ENST00000491387 ADAM23O75077 832 aa8.99□□□□□ -0.97
APOBEC3F-204ENST00000491387 RTN3O95197 1032 aaPredicted RBP8.99□□□□□ -0.97
APOBEC3F-204ENST00000491387 ADH1CP00326 375 aa8.99□□□□□ -0.97
APOBEC3F-204ENST00000491387 CST3P01034 146 aaPredicted RBP8.99□□□□□ -0.97
APOBEC3F-204ENST00000491387 APODP05090 189 aa8.99□□□□□ -0.97
APOBEC3F-204ENST00000491387 PDGFRBP09619 1106 aa8.99□□□□□ -0.97
APOBEC3F-204ENST00000491387 ZDHHC11BP0C7U3 371 aa8.99□□□□□ -0.97
APOBEC3F-204ENST00000491387 C1QTNF9P0C862 333 aa8.99□□□□□ -0.97
APOBEC3F-204ENST00000491387 PTPN1P18031 435 aaKnown RBP8.99□□□□□ -0.97
APOBEC3F-204ENST00000491387 SLC6A11P48066 632 aa8.99□□□□□ -0.97
APOBEC3F-204ENST00000491387 SEC13P55735 322 aa8.99□□□□□ -0.97
APOBEC3F-204ENST00000491387 DNM1Q05193 864 aaKnown RBP8.99□□□□□ -0.97
APOBEC3F-204ENST00000491387 EHHADHQ08426 723 aa8.99□□□□□ -0.97
APOBEC3F-204ENST00000491387 TAF10Q12962 218 aa8.99□□□□□ -0.97
APOBEC3F-204ENST00000491387 PSMD6Q15008 389 aa8.99□□□□□ -0.97
APOBEC3F-204ENST00000491387 EOGTQ5NDL2 527 aa8.99□□□□□ -0.97
APOBEC3F-204ENST00000491387 TDRD10Q5VZ19 366 aaKnown RBP8.99□□□□□ -0.97
APOBEC3F-204ENST00000491387 PIP4P1Q86T03 277 aa8.99□□□□□ -0.97
APOBEC3F-204ENST00000491387 CCDC33Q8N5R6 958 aa8.99□□□□□ -0.97
APOBEC3F-204ENST00000491387 ALLCQ8N6M5 410 aa8.99□□□□□ -0.97
APOBEC3F-204ENST00000491387 TXNDC5Q8NBS9 432 aaKnown RBP8.99□□□□□ -0.97
APOBEC3F-204ENST00000491387 PDZD8Q8NEN9 1154 aa8.99□□□□□ -0.97
APOBEC3F-204ENST00000491387 ZNF507Q8TCN5 953 aa8.99□□□□□ -0.97
APOBEC3F-204ENST00000491387 GATA6Q92908 595 aa8.99□□□□□ -0.97
APOBEC3F-204ENST00000491387 ELMO3Q96BJ8 720 aa8.99□□□□□ -0.97
APOBEC3F-204ENST00000491387 ZFRQ96KR1 1074 aaKnown RBP8.99□□□□□ -0.97
APOBEC3F-204ENST00000491387 SLITRK1Q96PX8 696 aa8.99□□□□□ -0.97
APOBEC3F-204ENST00000491387 MRPL45Q9BRJ2 306 aaKnown RBP8.99□□□□□ -0.97
APOBEC3F-204ENST00000491387 TRIM9Q9C026 710 aa8.99□□□□□ -0.97
APOBEC3F-204ENST00000491387 TNMDQ9H2S6 317 aa8.99□□□□□ -0.97
APOBEC3F-204ENST00000491387 SNX25Q9H3E2 840 aa8.99□□□□□ -0.97
APOBEC3F-204ENST00000491387 CUEDC2Q9H467 287 aa8.99□□□□□ -0.97
APOBEC3F-204ENST00000491387 POLMQ9NP87 494 aaPredicted RBP8.99□□□□□ -0.97
APOBEC3F-204ENST00000491387 COMMD8Q9NX08 183 aa8.99□□□□□ -0.97
APOBEC3F-204ENST00000491387 CFAP97Q9P2B7 532 aa8.99□□□□□ -0.97
APOBEC3F-204ENST00000491387 MBD1Q9UIS9 605 aaPredicted RBP8.99□□□□□ -0.97
APOBEC3F-204ENST00000491387 INVSQ9Y283 1065 aa8.99□□□□□ -0.97
APOBEC3F-204ENST00000491387 STARD13Q9Y3M8 1113 aa8.99□□□□□ -0.97
APOBEC3F-204ENST00000491387 DMXL2Q8TDJ6 3036 aa8.98□□□□□ -0.97
APOBEC3F-204ENST00000491387 FAM221BA6H8Z2 402 aa8.98□□□□□ -0.97
APOBEC3F-204ENST00000491387 PATE3B3GLJ2 98 aa8.98□□□□□ -0.97
APOBEC3F-204ENST00000491387 TGFB1I1O43294 461 aa8.98□□□□□ -0.97
APOBEC3F-204ENST00000491387 KLF8O95600 359 aaPredicted RBP8.98□□□□□ -0.97
APOBEC3F-204ENST00000491387 ZSCAN22P10073 491 aaPredicted RBP8.98□□□□□ -0.97
APOBEC3F-204ENST00000491387 ADH5P11766 374 aa8.98□□□□□ -0.97
APOBEC3F-204ENST00000491387 YWHAQP27348 245 aa8.98□□□□□ -0.97
APOBEC3F-204ENST00000491387 ATICP31939 592 aa8.98□□□□□ -0.97
APOBEC3F-204ENST00000491387 PTGER3P43115 390 aa8.98□□□□□ -0.97
APOBEC3F-204ENST00000491387 DHPSP49366 369 aaPredicted RBP8.98□□□□□ -0.97
APOBEC3F-204ENST00000491387 CACNA2D1P54289 1103 aa8.98□□□□□ -0.97
APOBEC3F-204ENST00000491387 CYP27A1Q02318 531 aa8.98□□□□□ -0.97
APOBEC3F-204ENST00000491387 GAD2Q05329 585 aa8.98□□□□□ -0.97
APOBEC3F-204ENST00000491387 SEMA3BQ13214 749 aa8.98□□□□□ -0.97
APOBEC3F-204ENST00000491387 SNRNP35Q16560 246 aaKnown RBP8.98□□□□□ -0.97
APOBEC3F-204ENST00000491387 PREPLQ4J6C6 727 aaPredicted RBP8.98□□□□□ -0.97
APOBEC3F-204ENST00000491387 TRIM61Q5EBN2 209 aa8.98□□□□□ -0.97
APOBEC3F-204ENST00000491387 MDH1BQ5I0G3 518 aa8.98□□□□□ -0.97
APOBEC3F-204ENST00000491387 LY6G5CQ5SRR4 150 aa8.98□□□□□ -0.97
APOBEC3F-204ENST00000491387 C12orf40Q86WS4 652 aa8.98□□□□□ -0.97
APOBEC3F-204ENST00000491387 SFTPA1Q8IWL2 248 aa8.98□□□□□ -0.97
APOBEC3F-204ENST00000491387 HSCBQ8IWL3 235 aa8.98□□□□□ -0.97
APOBEC3F-204ENST00000491387 C12orf56Q8IXR9 622 aa8.98□□□□□ -0.97
APOBEC3F-204ENST00000491387 NUP93Q8N1F7 819 aa8.98□□□□□ -0.97
APOBEC3F-204ENST00000491387 CEP76Q8TAP6 659 aa8.98□□□□□ -0.97
APOBEC3F-204ENST00000491387 TMEM174Q8WUU8 243 aa8.98□□□□□ -0.97
APOBEC3F-204ENST00000491387 PIGKQ92643 395 aa8.98□□□□□ -0.97
APOBEC3F-204ENST00000491387 SPACA7Q96KW9 195 aa8.98□□□□□ -0.97
APOBEC3F-204ENST00000491387 MMS19Q96T76 1030 aa8.98□□□□□ -0.97
APOBEC3F-204ENST00000491387 CGRRF1Q99675 332 aa8.98□□□□□ -0.97
APOBEC3F-204ENST00000491387 NUSAP1Q9BXS6 441 aaKnown RBP8.98□□□□□ -0.97
APOBEC3F-204ENST00000491387 B3GNT5Q9BYG0 378 aa8.98□□□□□ -0.97
APOBEC3F-204ENST00000491387 ADAM33Q9BZ11 813 aa8.98□□□□□ -0.97
APOBEC3F-204ENST00000491387 ZNF518BQ9C0D4 1074 aa8.98□□□□□ -0.97
APOBEC3F-204ENST00000491387 GZF1Q9H116 711 aaPredicted RBP8.98□□□□□ -0.97
APOBEC3F-204ENST00000491387 XYLT2Q9H1B5 865 aa8.98□□□□□ -0.97
APOBEC3F-204ENST00000491387 ZSCAN16Q9H4T2 348 aaPredicted RBP8.98□□□□□ -0.97
APOBEC3F-204ENST00000491387 CD248Q9HCU0 757 aa8.98□□□□□ -0.97
APOBEC3F-204ENST00000491387 ARHGEF4Q9NR80 690 aa8.98□□□□□ -0.97
APOBEC3F-204ENST00000491387 AGPAT3Q9NRZ7 376 aa8.98□□□□□ -0.97
APOBEC3F-204ENST00000491387 TMEM74BQ9NUR3 256 aa8.98□□□□□ -0.97
APOBEC3F-204ENST00000491387 CGNQ9P2M7 1197 aaKnown RBP8.98□□□□□ -0.97
APOBEC3F-204ENST00000491387 PILRBQ9UKJ0 227 aa8.98□□□□□ -0.97
APOBEC3F-204ENST00000491387 ZMIZ1Q9ULJ6 1067 aa8.98□□□□□ -0.97
APOBEC3F-204ENST00000491387 PCDHA7Q9UN72 937 aa8.98□□□□□ -0.97
APOBEC3F-204ENST00000491387 NEUROG3Q9Y4Z2 214 aa8.98□□□□□ -0.97
APOBEC3F-204ENST00000491387 UBE4BO95155 1302 aa8.98□□□□□ -0.97
APOBEC3F-204ENST00000491387 TP53BP1Q12888 1972 aaPredicted RBP8.97□□□□□ -0.97
APOBEC3F-204ENST00000491387 COCHO43405 550 aa8.97□□□□□ -0.97
APOBEC3F-204ENST00000491387 GREM1O60565 184 aa8.97□□□□□ -0.97
APOBEC3F-204ENST00000491387 MBL2P11226 248 aaPredicted RBP8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms