RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, human

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-223	ENST00000490833	CDK18	Q07002	472 aa		6.62	□□□□□ -1.35
FN1-223	ENST00000490833	ARHGAP1	Q07960	439 aa		6.62	□□□□□ -1.35
FN1-223	ENST00000490833	MTA1	Q13330	715 aa		6.62	□□□□□ -1.35
FN1-223	ENST00000490833	RIPK1	Q13546	671 aa		6.62	□□□□□ -1.35
FN1-223	ENST00000490833	KRT81	Q14533	505 aa		6.62	□□□□□ -1.35
FN1-223	ENST00000490833	R3HDM1	Q15032	1099 aa	Known RBP	6.62	□□□□□ -1.35
FN1-223	ENST00000490833	PTPRO	Q16827	1216 aa		6.62	□□□□□ -1.35
FN1-223	ENST00000490833	SV2C	Q496J9	727 aa		6.62	□□□□□ -1.35
FN1-223	ENST00000490833	RNASEH2B	Q5TBB1	312 aa	Known RBP	6.62	□□□□□ -1.35
FN1-223	ENST00000490833	RNF43	Q68DV7	783 aa		6.62	□□□□□ -1.35
FN1-223	ENST00000490833	SPOPL	Q6IQ16	392 aa		6.62	□□□□□ -1.35
FN1-223	ENST00000490833	TAF2	Q6P1X5	1199 aa		6.62	□□□□□ -1.35
FN1-223	ENST00000490833	DARS2	Q6PI48	645 aa	Known RBP	6.62	□□□□□ -1.35
FN1-223	ENST00000490833	MFSD7	Q6UXD7	560 aa		6.62	□□□□□ -1.35
FN1-223	ENST00000490833	STRADA	Q7RTN6	431 aa		6.62	□□□□□ -1.35
FN1-223	ENST00000490833	TRPM8	Q7Z2W7	1104 aa		6.62	□□□□□ -1.35
FN1-223	ENST00000490833	PLEKHH3	Q7Z736	793 aa		6.62	□□□□□ -1.35
FN1-223	ENST00000490833	XYLT1	Q86Y38	959 aa		6.62	□□□□□ -1.35
FN1-223	ENST00000490833	PASD1	Q8IV76	773 aa		6.62	□□□□□ -1.35
FN1-223	ENST00000490833	CRYBG2	Q8N1P7	616 aa		6.62	□□□□□ -1.35
FN1-223	ENST00000490833	LINC01465	Q8N7H1	131 aa		6.62	□□□□□ -1.35
FN1-223	ENST00000490833	C1orf127	Q8N9H9	656 aa		6.62	□□□□□ -1.35
FN1-223	ENST00000490833	ANKRD52	Q8NB46	1076 aa		6.62	□□□□□ -1.35
FN1-223	ENST00000490833	OR2W6P	Q8NHA6	318 aa		6.62	□□□□□ -1.35
FN1-223	ENST00000490833	GABPB2	Q8TAK5	448 aa	Predicted RBP	6.62	□□□□□ -1.35
FN1-223	ENST00000490833	SREK1	Q8WXA9	508 aa	Known RBP	6.62	□□□□□ -1.35
FN1-223	ENST00000490833	CDKL2	Q92772	493 aa		6.62	□□□□□ -1.35
FN1-223	ENST00000490833	RTP4	Q96DX8	246 aa		6.62	□□□□□ -1.35
FN1-223	ENST00000490833	BTBD6	Q96KE9	485 aa		6.62	□□□□□ -1.35
FN1-223	ENST00000490833	MRGPRX2	Q96LB1	330 aa		6.62	□□□□□ -1.35
FN1-223	ENST00000490833	SLC9A7	Q96T83	725 aa		6.62	□□□□□ -1.35
FN1-223	ENST00000490833	TINF2	Q9BSI4	451 aa		6.62	□□□□□ -1.35
FN1-223	ENST00000490833	HAPLN2	Q9GZV7	340 aa		6.62	□□□□□ -1.35
FN1-223	ENST00000490833	IQCG	Q9H095	443 aa	Known RBP	6.62	□□□□□ -1.35
FN1-223	ENST00000490833	EPB41L4B	Q9H329	900 aa		6.62	□□□□□ -1.35
FN1-223	ENST00000490833	PDZD7	Q9H5P4	517 aa		6.62	□□□□□ -1.35
FN1-223	ENST00000490833	RXFP1	Q9HBX9	757 aa		6.62	□□□□□ -1.35
FN1-223	ENST00000490833	PNPLA8	Q9NP80	782 aa		6.62	□□□□□ -1.35
FN1-223	ENST00000490833	SAYSD1	Q9NPB0	183 aa		6.62	□□□□□ -1.35
FN1-223	ENST00000490833	CHST12	Q9NRB3	414 aa		6.62	□□□□□ -1.35
FN1-223	ENST00000490833	TXLNG	Q9NUQ3	528 aa		6.62	□□□□□ -1.35
FN1-223	ENST00000490833	MRGBP	Q9NV56	204 aa		6.62	□□□□□ -1.35
FN1-223	ENST00000490833	GDAP2	Q9NXN4	497 aa		6.62	□□□□□ -1.35
FN1-223	ENST00000490833	NINJ2	Q9NZG7	142 aa		6.62	□□□□□ -1.35
FN1-223	ENST00000490833	ZNF180	Q9UJW8	692 aa		6.62	□□□□□ -1.35
FN1-223	ENST00000490833	STAP1	Q9ULZ2	295 aa		6.62	□□□□□ -1.35
FN1-223	ENST00000490833	AGAP1	Q9UPQ3	857 aa		6.62	□□□□□ -1.35
FN1-223	ENST00000490833	DICER1	Q9UPY3	1922 aa	Known RBP	6.62	□□□□□ -1.35
FN1-223	ENST00000490833	ARID2	Q68CP9	1835 aa		6.62	□□□□□ -1.35
FN1-223	ENST00000490833		A0A0G2JMZ2	1700 aa		6.62	□□□□□ -1.35
FN1-223	ENST00000490833	SF3B1	O75533	1304 aa	Known RBP eCLIP	6.61	□□□□□ -1.35
FN1-223	ENST00000490833		A0A087WZ62	844 aa		6.61	□□□□□ -1.35
FN1-223	ENST00000490833	MAGEB16	A2A368	324 aa		6.61	□□□□□ -1.35
FN1-223	ENST00000490833	C2CD4B	A6NLJ0	364 aa		6.61	□□□□□ -1.35
FN1-223	ENST00000490833	ERI2	A8K979	691 aa	Known RBP	6.61	□□□□□ -1.35
FN1-223	ENST00000490833		F8VP50	259 aa		6.61	□□□□□ -1.35
FN1-223	ENST00000490833		M0QYV0	167 aa		6.61	□□□□□ -1.35
FN1-223	ENST00000490833	APOL1	O14791	398 aa		6.61	□□□□□ -1.35
FN1-223	ENST00000490833	PSMD3	O43242	534 aa		6.61	□□□□□ -1.35
FN1-223	ENST00000490833	SNX3	O60493	162 aa		6.61	□□□□□ -1.35
FN1-223	ENST00000490833	HUS1	O60921	280 aa		6.61	□□□□□ -1.35
FN1-223	ENST00000490833	LRCH4	O75427	683 aa		6.61	□□□□□ -1.35
FN1-223	ENST00000490833	DDN	O94850	711 aa	Predicted RBP	6.61	□□□□□ -1.35
FN1-223	ENST00000490833	MICAL2	O94851	1124 aa		6.61	□□□□□ -1.35
FN1-223	ENST00000490833	TGDS	O95455	350 aa		6.61	□□□□□ -1.35
FN1-223	ENST00000490833	IFNB1	P01574	187 aa		6.61	□□□□□ -1.35
FN1-223	ENST00000490833	IL1B	P01584	269 aa		6.61	□□□□□ -1.35
FN1-223	ENST00000490833	SHBG	P04278	402 aa		6.61	□□□□□ -1.35
FN1-223	ENST00000490833	ITGB3	P05106	788 aa		6.61	□□□□□ -1.35
FN1-223	ENST00000490833	INHBA	P08476	426 aa		6.61	□□□□□ -1.35
FN1-223	ENST00000490833	RBP3	P10745	1247 aa		6.61	□□□□□ -1.35
FN1-223	ENST00000490833	EZR	P15311	586 aa	Known RBP	6.61	□□□□□ -1.35
FN1-223	ENST00000490833	KCNE1	P15382	129 aa		6.61	□□□□□ -1.35
FN1-223	ENST00000490833	ARF4	P18085	180 aa	Predicted RBP	6.61	□□□□□ -1.35
FN1-223	ENST00000490833	FGFR4	P22455	802 aa		6.61	□□□□□ -1.35
FN1-223	ENST00000490833	BRD2	P25440	801 aa	Known RBP	6.61	□□□□□ -1.35
FN1-223	ENST00000490833	MARK3	P27448	753 aa		6.61	□□□□□ -1.35
FN1-223	ENST00000490833	ADORA2A	P29274	412 aa		6.61	□□□□□ -1.35
FN1-223	ENST00000490833	FDFT1	P37268	417 aa		6.61	□□□□□ -1.35
FN1-223	ENST00000490833	ARL4A	P40617	200 aa		6.61	□□□□□ -1.35
FN1-223	ENST00000490833	TNFSF9	P41273	254 aa		6.61	□□□□□ -1.35
FN1-223	ENST00000490833	MAGEA6	P43360	314 aa		6.61	□□□□□ -1.35
FN1-223	ENST00000490833	LHX1	P48742	406 aa		6.61	□□□□□ -1.35
FN1-223	ENST00000490833	RPL34	P49207	117 aa	Known RBP	6.61	□□□□□ -1.35
FN1-223	ENST00000490833	CTCF	P49711	727 aa	Predicted RBP	6.61	□□□□□ -1.35
FN1-223	ENST00000490833	SMCP	P49901	116 aa	Predicted RBP	6.61	□□□□□ -1.35
FN1-223	ENST00000490833	CRYBB1	P53674	252 aa	Predicted RBP	6.61	□□□□□ -1.35
FN1-223	ENST00000490833	SEC24C	P53992	1094 aa		6.61	□□□□□ -1.35
FN1-223	ENST00000490833	BCAR1	P56945	870 aa		6.61	□□□□□ -1.35
FN1-223	ENST00000490833	TAS2R40	P59535	323 aa		6.61	□□□□□ -1.35
FN1-223	ENST00000490833	EIF3E	P60228	445 aa	Known RBP	6.61	□□□□□ -1.35
FN1-223	ENST00000490833	RPL7A	P62424	266 aa	Known RBP	6.61	□□□□□ -1.35
FN1-223	ENST00000490833	SLC25A11	Q02978	314 aa	Known RBP	6.61	□□□□□ -1.35
FN1-223	ENST00000490833	ZNF33A	Q06730	810 aa		6.61	□□□□□ -1.35
FN1-223	ENST00000490833	BST2	Q10589	180 aa	Known RBP	6.61	□□□□□ -1.35
FN1-223	ENST00000490833	DGKZ	Q13574	1117 aa		6.61	□□□□□ -1.35
FN1-223	ENST00000490833	PRKG1	Q13976	671 aa		6.61	□□□□□ -1.35
FN1-223	ENST00000490833	DPYSL3	Q14195	570 aa		6.61	□□□□□ -1.35
FN1-223	ENST00000490833	GRB14	Q14449	540 aa		6.61	□□□□□ -1.35
FN1-223	ENST00000490833	MTFR1	Q15390	333 aa		6.61	□□□□□ -1.35

Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms