RNA–Protein interactions for RNA: ENST00000490751.1

LDB1-204, Transcript of LIM domain binding 1, human

TSL 2

Gene LDB1, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LDB1-204	ENST00000490751	NRL	P54845	237 aa		33.21	■■■□□ 2.91
LDB1-204	ENST00000490751	NAIF1	Q69YI7	327 aa	Predicted RBP	33.21	■■■□□ 2.91
LDB1-204	ENST00000490751	SUMF1	Q8NBK3	374 aa		33.21	■■■□□ 2.91
LDB1-204	ENST00000490751	CYFIP2	Q96F07	1278 aa		33.21	■■■□□ 2.91
LDB1-204	ENST00000490751	GMIP	Q9P107	970 aa		33.21	■■■□□ 2.91
LDB1-204	ENST00000490751	FAM92A	A1XBS5	289 aa		33.2	■■■□□ 2.91
LDB1-204	ENST00000490751	PSMA7	O14818	248 aa		33.2	■■■□□ 2.91
LDB1-204	ENST00000490751	P2RY13	Q9BPV8	354 aa		33.2	■■■□□ 2.91
LDB1-204	ENST00000490751	FBRSL1	Q9HCM7	1045 aa	Known RBP	33.2	■■■□□ 2.91
LDB1-204	ENST00000490751	CFAP54	Q96N23	3096 aa		33.2	■■■□□ 2.9
LDB1-204	ENST00000490751	NFATC1	O95644	943 aa		33.19	■■■□□ 2.9
LDB1-204	ENST00000490751	CD44	P16070	742 aa	Known RBP	33.19	■■■□□ 2.9
LDB1-204	ENST00000490751	GALK1	P51570	392 aa		33.19	■■■□□ 2.9
LDB1-204	ENST00000490751	CBWD6	Q4V339	395 aa		33.19	■■■□□ 2.9
LDB1-204	ENST00000490751	CBWD3	Q5JTY5	395 aa		33.19	■■■□□ 2.9
LDB1-204	ENST00000490751	CBWD5	Q5RIA9	395 aa		33.19	■■■□□ 2.9
LDB1-204	ENST00000490751	HECTD3	Q5T447	861 aa		33.19	■■■□□ 2.9
LDB1-204	ENST00000490751	SNX30	Q5VWJ9	437 aa		33.19	■■■□□ 2.9
LDB1-204	ENST00000490751	CLEC20A	Q6ZU45	233 aa		33.19	■■■□□ 2.9
LDB1-204	ENST00000490751	DHTKD1	Q96HY7	919 aa	Predicted RBP	33.19	■■■□□ 2.9
LDB1-204	ENST00000490751	FAXDC2	Q96IV6	333 aa		33.19	■■■□□ 2.9
LDB1-204	ENST00000490751	DNAI2	Q9GZS0	605 aa		33.19	■■■□□ 2.9
LDB1-204	ENST00000490751	C2orf42	Q9NWW7	574 aa		33.19	■■■□□ 2.9
LDB1-204	ENST00000490751	COCH	O43405	550 aa		33.18	■■■□□ 2.9
LDB1-204	ENST00000490751	PAPSS2	O95340	614 aa	Predicted RBP	33.18	■■■□□ 2.9
LDB1-204	ENST00000490751	EGF	P01133	1207 aa		33.18	■■■□□ 2.9
LDB1-204	ENST00000490751	ZDHHC11B	P0C7U3	371 aa		33.18	■■■□□ 2.9
LDB1-204	ENST00000490751	NR1H3	Q13133	447 aa		33.18	■■■□□ 2.9
LDB1-204	ENST00000490751	ZNF394	Q53GI3	561 aa		33.18	■■■□□ 2.9
LDB1-204	ENST00000490751	FILIP1	Q7Z7B0	1213 aa		33.18	■■■□□ 2.9
LDB1-204	ENST00000490751	EXOC4	Q96A65	974 aa		33.18	■■■□□ 2.9
LDB1-204	ENST00000490751	JAKMIP2	Q96AA8	810 aa		33.18	■■■□□ 2.9
LDB1-204	ENST00000490751	FBXO44	Q9H4M3	255 aa		33.18	■■■□□ 2.9
LDB1-204	ENST00000490751	CFAP97	Q9P2B7	532 aa		33.18	■■■□□ 2.9
LDB1-204	ENST00000490751	ARMCX3	Q9UH62	379 aa	Predicted RBP	33.18	■■■□□ 2.9
LDB1-204	ENST00000490751	DRD1	P21728	446 aa		33.17	■■■□□ 2.9
LDB1-204	ENST00000490751	PPP1R2	P41236	205 aa		33.17	■■■□□ 2.9
LDB1-204	ENST00000490751	PKN3	Q6P5Z2	889 aa		33.17	■■■□□ 2.9
LDB1-204	ENST00000490751	DDX42	Q86XP3	938 aa	Known RBP eCLIP	33.17	■■■□□ 2.9
LDB1-204	ENST00000490751	KIAA1958	Q8N8K9	716 aa		33.17	■■■□□ 2.9
LDB1-204	ENST00000490751	ARID3A	Q99856	593 aa		33.17	■■■□□ 2.9
LDB1-204	ENST00000490751	HINFP	Q9BQA5	517 aa		33.17	■■■□□ 2.9
LDB1-204	ENST00000490751	EPC1	Q9H2F5	836 aa		33.17	■■■□□ 2.9
LDB1-204	ENST00000490751	CCSER2	Q9H7U1	834 aa		33.17	■■■□□ 2.9
LDB1-204	ENST00000490751	ATG2B	Q96BY7	2078 aa		33.17	■■■□□ 2.9
LDB1-204	ENST00000490751		K7ESF4	209 aa		33.16	■■■□□ 2.9
LDB1-204	ENST00000490751	SCAMP3	O14828	347 aa	Known RBP	33.16	■■■□□ 2.9
LDB1-204	ENST00000490751	TUB	P50607	506 aa		33.16	■■■□□ 2.9
LDB1-204	ENST00000490751	KLHL10	Q6JEL2	608 aa		33.16	■■■□□ 2.9
LDB1-204	ENST00000490751	GPRIN1	Q7Z2K8	1008 aa		33.16	■■■□□ 2.9
LDB1-204	ENST00000490751	TTC39C	Q8N584	583 aa		33.16	■■■□□ 2.9
LDB1-204	ENST00000490751	RUBCN	Q92622	972 aa		33.16	■■■□□ 2.9
LDB1-204	ENST00000490751	CD101	Q93033	1021 aa		33.16	■■■□□ 2.9
LDB1-204	ENST00000490751	TATDN2	Q93075	761 aa		33.16	■■■□□ 2.9
LDB1-204	ENST00000490751	CISH	Q9NSE2	258 aa		33.16	■■■□□ 2.9
LDB1-204	ENST00000490751	COQ4	Q9Y3A0	265 aa		33.16	■■■□□ 2.9
LDB1-204	ENST00000490751	GVINP1	Q7Z2Y8	2422 aa		33.16	■■■□□ 2.9
LDB1-204	ENST00000490751	HHLA1	C9JL84	531 aa		33.15	■■■□□ 2.9
LDB1-204	ENST00000490751	BMP6	P22004	513 aa		33.15	■■■□□ 2.9
LDB1-204	ENST00000490751	DMWD	Q09019	674 aa		33.15	■■■□□ 2.9
LDB1-204	ENST00000490751	SLC35C1	Q96A29	364 aa		33.15	■■■□□ 2.9
LDB1-204	ENST00000490751	SMG5	Q9UPR3	1016 aa	Known RBP	33.15	■■■□□ 2.9
LDB1-204	ENST00000490751	CHURC1-FNTB	B4DL54	471 aa		33.14	■■■□□ 2.9
LDB1-204	ENST00000490751	SLC9A3R1	O14745	358 aa	Predicted RBP	33.14	■■■□□ 2.9
LDB1-204	ENST00000490751	RNF40	O75150	1001 aa		33.14	■■■□□ 2.9
LDB1-204	ENST00000490751	FNTB	P49356	437 aa		33.14	■■■□□ 2.9
LDB1-204	ENST00000490751	PGF	P49763	221 aa		33.14	■■■□□ 2.9
LDB1-204	ENST00000490751	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	33.14	■■■□□ 2.9
LDB1-204	ENST00000490751	ZFR	Q96KR1	1074 aa	Known RBP	33.14	■■■□□ 2.9
LDB1-204	ENST00000490751	CEP63	Q96MT8	703 aa		33.14	■■■□□ 2.9
LDB1-204	ENST00000490751	PNPLA8	Q9NP80	782 aa		33.14	■■■□□ 2.9
LDB1-204	ENST00000490751	OTOGL	Q3ZCN5	2332 aa		33.14	■■■□□ 2.9
LDB1-204	ENST00000490751	EP300	Q09472	2414 aa	Predicted RBP	33.13	■■■□□ 2.89
LDB1-204	ENST00000490751	BIN1	O00499	593 aa		33.13	■■■□□ 2.89
LDB1-204	ENST00000490751	CYP17A1	P05093	508 aa		33.13	■■■□□ 2.89
LDB1-204	ENST00000490751	MORC3	Q14149	939 aa		33.13	■■■□□ 2.89
LDB1-204	ENST00000490751	HEXIM2	Q96MH2	286 aa	Known RBP	33.13	■■■□□ 2.89
LDB1-204	ENST00000490751	DUSP9	Q99956	384 aa	Known RBP	33.13	■■■□□ 2.89
LDB1-204	ENST00000490751	NACA2	Q9H009	215 aa		33.13	■■■□□ 2.89
LDB1-204	ENST00000490751	METTL14	Q9HCE5	456 aa	Known RBP	33.13	■■■□□ 2.89
LDB1-204	ENST00000490751	TLR8	Q9NR97	1041 aa	Known RBP	33.13	■■■□□ 2.89
LDB1-204	ENST00000490751	KIAA1549L	Q6ZVL6	1849 aa		33.13	■■■□□ 2.89
LDB1-204	ENST00000490751	PPP1R3G	B7ZBB8	358 aa		33.12	■■■□□ 2.89
LDB1-204	ENST00000490751	ACO1	P21399	889 aa	Known RBP	33.12	■■■□□ 2.89
LDB1-204	ENST00000490751	FBXO43	Q4G163	708 aa		33.12	■■■□□ 2.89
LDB1-204	ENST00000490751	HEATR6	Q6AI08	1181 aa	Known RBP	33.12	■■■□□ 2.89
LDB1-204	ENST00000490751	TTI2	Q6NXR4	508 aa		33.12	■■■□□ 2.89
LDB1-204	ENST00000490751	DCLK2	Q8N568	766 aa		33.12	■■■□□ 2.89
LDB1-204	ENST00000490751	SLC4A11	Q8NBS3	891 aa		33.12	■■■□□ 2.89
LDB1-204	ENST00000490751	NELFB	Q8WX92	580 aa		33.12	■■■□□ 2.89
LDB1-204	ENST00000490751	EZH1	Q92800	747 aa	Predicted RBP	33.12	■■■□□ 2.89
LDB1-204	ENST00000490751	TMEM176A	Q96HP8	235 aa		33.12	■■■□□ 2.89
LDB1-204	ENST00000490751	DUSP16	Q9BY84	665 aa		33.12	■■■□□ 2.89
LDB1-204	ENST00000490751	FAM124B	Q9H5Z6	455 aa	Predicted RBP	33.12	■■■□□ 2.89
LDB1-204	ENST00000490751	SCML2	Q9UQR0	700 aa		33.12	■■■□□ 2.89
LDB1-204	ENST00000490751	CYP26A1	O43174	497 aa		33.11	■■■□□ 2.89
LDB1-204	ENST00000490751	TLR5	O60602	858 aa		33.11	■■■□□ 2.89
LDB1-204	ENST00000490751	ATG13	O75143	517 aa		33.11	■■■□□ 2.89
LDB1-204	ENST00000490751	HOXC13	P31276	330 aa		33.11	■■■□□ 2.89
LDB1-204	ENST00000490751	RAD23B	P54727	409 aa		33.11	■■■□□ 2.89

Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms