RNA–Protein interactions for RNA: ENST00000490062.1

ERCC3-207, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-207ENST00000490062 ZBED6P86452 979 aa18.38■□□□□ 0.53
ERCC3-207ENST00000490062 CDR2Q01850 454 aa18.38■□□□□ 0.53
ERCC3-207ENST00000490062 ARID5BQ14865 1188 aa18.38■□□□□ 0.53
ERCC3-207ENST00000490062 TEAD2Q15562 447 aa18.38■□□□□ 0.53
ERCC3-207ENST00000490062 PTPN21Q16825 1174 aa18.38■□□□□ 0.53
ERCC3-207ENST00000490062 PMF1Q6P1K2 205 aa18.38■□□□□ 0.53
ERCC3-207ENST00000490062 DENND1BQ6P3S1 775 aa18.38■□□□□ 0.53
ERCC3-207ENST00000490062 TMEM110Q86TL2 294 aa18.38■□□□□ 0.53
ERCC3-207ENST00000490062 WDTC1Q8N5D0 677 aa18.38■□□□□ 0.53
ERCC3-207ENST00000490062 FBXO32Q969P5 355 aa18.38■□□□□ 0.53
ERCC3-207ENST00000490062 RPGRIP1Q96KN7 1286 aa18.38■□□□□ 0.53
ERCC3-207ENST00000490062 SYT11Q9BT88 431 aa18.38■□□□□ 0.53
ERCC3-207ENST00000490062 GABBR2O75899 941 aa18.37■□□□□ 0.53
ERCC3-207ENST00000490062 OAS1P00973 400 aaKnown RBP18.37■□□□□ 0.53
ERCC3-207ENST00000490062 GYPCP04921 128 aa18.37■□□□□ 0.53
ERCC3-207ENST00000490062 CFHP08603 1231 aa18.37■□□□□ 0.53
ERCC3-207ENST00000490062 GBP2P32456 591 aaPredicted RBP18.37■□□□□ 0.53
ERCC3-207ENST00000490062 TRIM72Q6ZMU5 477 aa18.37■□□□□ 0.53
ERCC3-207ENST00000490062 BHLHA9Q7RTU4 235 aa18.37■□□□□ 0.53
ERCC3-207ENST00000490062 ADAMTS19Q8TE59 1207 aa18.37■□□□□ 0.53
ERCC3-207ENST00000490062 IRGQQ8WZA9 623 aa18.37■□□□□ 0.53
ERCC3-207ENST00000490062 MRFAP1L1Q96HT8 127 aa18.37■□□□□ 0.53
ERCC3-207ENST00000490062 ASB16Q96NS5 453 aa18.37■□□□□ 0.53
ERCC3-207ENST00000490062 LRRC4Q9HBW1 653 aa18.37■□□□□ 0.53
ERCC3-207ENST00000490062 OBP2AQ9NY56 170 aa18.37■□□□□ 0.53
ERCC3-207ENST00000490062 CLIC5Q9NZA1 410 aa18.37■□□□□ 0.53
ERCC3-207ENST00000490062 IGSF9Q9P2J2 1179 aa18.37■□□□□ 0.53
ERCC3-207ENST00000490062 CEP83Q9Y592 693 aa18.37■□□□□ 0.53
ERCC3-207ENST00000490062 LRRC53A6NM62 1247 aa18.36■□□□□ 0.53
ERCC3-207ENST00000490062 FBXO21O94952 628 aa18.36■□□□□ 0.53
ERCC3-207ENST00000490062 CYP1A1P04798 512 aaPredicted RBP18.36■□□□□ 0.53
ERCC3-207ENST00000490062 TCF3P15923 654 aa18.36■□□□□ 0.53
ERCC3-207ENST00000490062 GJA1P17302 382 aa18.36■□□□□ 0.53
ERCC3-207ENST00000490062 HNRNPH3P31942 346 aaKnown RBP18.36■□□□□ 0.53
ERCC3-207ENST00000490062 TKTL1P51854 596 aa18.36■□□□□ 0.53
ERCC3-207ENST00000490062 CYP4F8P98187 520 aa18.36■□□□□ 0.53
ERCC3-207ENST00000490062 FMO1Q01740 532 aa18.36■□□□□ 0.53
ERCC3-207ENST00000490062 PDCLQ13371 301 aa18.36■□□□□ 0.53
ERCC3-207ENST00000490062 HTR4Q13639 388 aa18.36■□□□□ 0.53
ERCC3-207ENST00000490062 ZNF268Q14587 947 aaPredicted RBP18.36■□□□□ 0.53
ERCC3-207ENST00000490062 GPR158Q5T848 1215 aa18.36■□□□□ 0.53
ERCC3-207ENST00000490062 KLHDC10Q6PID8 442 aa18.36■□□□□ 0.53
ERCC3-207ENST00000490062 MTSS1LQ765P7 747 aa18.36■□□□□ 0.53
ERCC3-207ENST00000490062 ARHGAP18Q8N392 663 aa18.36■□□□□ 0.53
ERCC3-207ENST00000490062 KIAA1958Q8N8K9 716 aa18.36■□□□□ 0.53
ERCC3-207ENST00000490062 TMEM35BQ8NCS4 154 aa18.36■□□□□ 0.53
ERCC3-207ENST00000490062 ING5Q8WYH8 240 aa18.36■□□□□ 0.53
ERCC3-207ENST00000490062 SMARCD2Q92925 531 aa18.36■□□□□ 0.53
ERCC3-207ENST00000490062 E2F7Q96AV8 911 aa18.36■□□□□ 0.53
ERCC3-207ENST00000490062 SLC46A2Q9BY10 475 aa18.36■□□□□ 0.53
ERCC3-207ENST00000490062 TLR8Q9NR97 1041 aaKnown RBP18.36■□□□□ 0.53
ERCC3-207ENST00000490062 CYTH4Q9UIA0 394 aa18.36■□□□□ 0.53
ERCC3-207ENST00000490062 MYO16Q9Y6X6 1858 aa18.35■□□□□ 0.53
ERCC3-207ENST00000490062 ECI2O75521 394 aa18.35■□□□□ 0.53
ERCC3-207ENST00000490062 ZBED1O96006 694 aa18.35■□□□□ 0.53
ERCC3-207ENST00000490062 CHRNB2P17787 502 aa18.35■□□□□ 0.53
ERCC3-207ENST00000490062 FCARP24071 287 aa18.35■□□□□ 0.53
ERCC3-207ENST00000490062 STXBP5Q5T5C0 1151 aa18.35■□□□□ 0.53
ERCC3-207ENST00000490062 BEND5Q7L4P6 421 aa18.35■□□□□ 0.53
ERCC3-207ENST00000490062 SCD5Q86SK9 330 aa18.35■□□□□ 0.53
ERCC3-207ENST00000490062 CMTM8Q8IZV2 173 aa18.35■□□□□ 0.53
ERCC3-207ENST00000490062 GJD3Q8N144 294 aa18.35■□□□□ 0.53
ERCC3-207ENST00000490062 ZNF397Q8NF99 534 aaPredicted RBP18.35■□□□□ 0.53
ERCC3-207ENST00000490062 ELSPBP1Q96BH3 223 aa18.35■□□□□ 0.53
ERCC3-207ENST00000490062 MCRS1Q96EZ8 462 aa18.35■□□□□ 0.53
ERCC3-207ENST00000490062 ZSWIM3Q96MP5 696 aa18.35■□□□□ 0.53
ERCC3-207ENST00000490062 NOX5Q96PH1 765 aa18.35■□□□□ 0.53
ERCC3-207ENST00000490062 TRIM5Q9C035 493 aa18.35■□□□□ 0.53
ERCC3-207ENST00000490062 GMIPQ9P107 970 aa18.35■□□□□ 0.53
ERCC3-207ENST00000490062 SART1O43290 800 aaKnown RBP18.34■□□□□ 0.53
ERCC3-207ENST00000490062 MMEP08473 750 aa18.34■□□□□ 0.53
ERCC3-207ENST00000490062 GABRB2P47870 512 aa18.34■□□□□ 0.53
ERCC3-207ENST00000490062 SNX16P57768 344 aa18.34■□□□□ 0.53
ERCC3-207ENST00000490062 DAOAP59103 153 aa18.34■□□□□ 0.53
ERCC3-207ENST00000490062 NOMO3P69849 1222 aa18.34■□□□□ 0.53
ERCC3-207ENST00000490062 SLC7A9P82251 487 aa18.34■□□□□ 0.53
ERCC3-207ENST00000490062 ADIGQ0VDE8 80 aa18.34■□□□□ 0.53
ERCC3-207ENST00000490062 TBX2Q13207 712 aaPredicted RBP18.34■□□□□ 0.53
ERCC3-207ENST00000490062 FAM78AQ5JUQ0 283 aa18.34■□□□□ 0.53
ERCC3-207ENST00000490062 SFMBT2Q5VUG0 894 aa18.34■□□□□ 0.53
ERCC3-207ENST00000490062 E4F1Q66K89 784 aaPredicted RBP18.34■□□□□ 0.53
ERCC3-207ENST00000490062 TXNDC8Q6A555 127 aa18.34■□□□□ 0.53
ERCC3-207ENST00000490062 SIX6OS1Q8N1H7 587 aa18.34■□□□□ 0.53
ERCC3-207ENST00000490062 OLIG1Q8TAK6 271 aa18.34■□□□□ 0.53
ERCC3-207ENST00000490062 ZSCAN18Q8TBC5 510 aaPredicted RBP18.34■□□□□ 0.53
ERCC3-207ENST00000490062 UHRF1Q96T88 793 aaPredicted RBP18.34■□□□□ 0.53
ERCC3-207ENST00000490062 ULBP1Q9BZM6 244 aa18.34■□□□□ 0.53
ERCC3-207ENST00000490062 KIF9Q9HAQ2 790 aa18.34■□□□□ 0.53
ERCC3-207ENST00000490062 LUC7L2Q9Y383 392 aaKnown RBP18.34■□□□□ 0.53
ERCC3-207ENST00000490062 TTC28Q96AY4 2481 aa18.33■□□□□ 0.53
ERCC3-207ENST00000490062 TRAV19A0A0A6YYK7 116 aa18.33■□□□□ 0.52
ERCC3-207ENST00000490062 USP17L7P0C7H9 530 aa18.33■□□□□ 0.52
ERCC3-207ENST00000490062 UNGP13051 313 aaPredicted RBP18.33■□□□□ 0.52
ERCC3-207ENST00000490062 SCNN1AP37088 669 aa18.33■□□□□ 0.52
ERCC3-207ENST00000490062 ZNF75DP51815 510 aa18.33■□□□□ 0.52
ERCC3-207ENST00000490062 HECTD3Q5T447 861 aa18.33■□□□□ 0.52
ERCC3-207ENST00000490062 ZDHHC17Q8IUH5 632 aa18.33■□□□□ 0.52
ERCC3-207ENST00000490062 ARID3BQ8IVW6 561 aaPredicted RBP18.33■□□□□ 0.52
ERCC3-207ENST00000490062 DRC7Q8IY82 874 aa18.33■□□□□ 0.52
ERCC3-207ENST00000490062 MAB21L3Q8N8X9 362 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms