RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 TAF4BQ92750 862 aa20.6■□□□□ 0.89
TNFRSF1B-202ENST00000489921 TNIP3Q96KP6 325 aa20.6■□□□□ 0.89
TNFRSF1B-202ENST00000489921 APOBEC3GQ9HC16 384 aaKnown RBP20.6■□□□□ 0.89
TNFRSF1B-202ENST00000489921 CSNK1G1Q9HCP0 422 aa20.6■□□□□ 0.89
TNFRSF1B-202ENST00000489921 MAPK8IP1Q9UQF2 711 aa20.6■□□□□ 0.89
TNFRSF1B-202ENST00000489921 SPTBN2O15020 2390 aa20.59■□□□□ 0.89
TNFRSF1B-202ENST00000489921 A0A1W2PQ27 194 aa20.59■□□□□ 0.89
TNFRSF1B-202ENST00000489921 A0A1W2PQ64 194 aa20.59■□□□□ 0.89
TNFRSF1B-202ENST00000489921 A0A1W2PQD8 194 aa20.59■□□□□ 0.89
TNFRSF1B-202ENST00000489921 COCHO43405 550 aa20.59■□□□□ 0.89
TNFRSF1B-202ENST00000489921 CALUO43852 315 aaPredicted RBP20.59■□□□□ 0.89
TNFRSF1B-202ENST00000489921 HLA-DRAP01903 254 aa20.59■□□□□ 0.89
TNFRSF1B-202ENST00000489921 CCDC130P13994 396 aa20.59■□□□□ 0.89
TNFRSF1B-202ENST00000489921 PPP3CAQ08209 521 aa20.59■□□□□ 0.89
TNFRSF1B-202ENST00000489921 DHCR24Q15392 516 aa20.59■□□□□ 0.89
TNFRSF1B-202ENST00000489921 CEP68Q76N32 757 aa20.59■□□□□ 0.89
TNFRSF1B-202ENST00000489921 KBTBD6Q86V97 674 aa20.59■□□□□ 0.89
TNFRSF1B-202ENST00000489921 C12orf29Q8N999 325 aa20.59■□□□□ 0.89
TNFRSF1B-202ENST00000489921 FBXO32Q969P5 355 aa20.59■□□□□ 0.89
TNFRSF1B-202ENST00000489921 SMARCD1Q96GM5 515 aa20.59■□□□□ 0.89
TNFRSF1B-202ENST00000489921 HHIPQ96QV1 700 aa20.59■□□□□ 0.89
TNFRSF1B-202ENST00000489921 TWNKQ96RR1 684 aa20.59■□□□□ 0.89
TNFRSF1B-202ENST00000489921 MED10Q9BTT4 135 aa20.59■□□□□ 0.89
TNFRSF1B-202ENST00000489921 CCSER2Q9H7U1 834 aa20.59■□□□□ 0.89
TNFRSF1B-202ENST00000489921 DMAP1Q9NPF5 467 aaPredicted RBP20.59■□□□□ 0.89
TNFRSF1B-202ENST00000489921 CFAP97Q9P2B7 532 aa20.59■□□□□ 0.89
TNFRSF1B-202ENST00000489921 FRMD4BQ9Y2L6 1034 aa20.59■□□□□ 0.89
TNFRSF1B-202ENST00000489921 GDF9O60383 454 aa20.58■□□□□ 0.89
TNFRSF1B-202ENST00000489921 RPP40O75818 363 aaKnown RBP20.58■□□□□ 0.89
TNFRSF1B-202ENST00000489921 AP1G2O75843 785 aa20.58■□□□□ 0.89
TNFRSF1B-202ENST00000489921 SDHBP21912 280 aa20.58■□□□□ 0.89
TNFRSF1B-202ENST00000489921 SLC6A11P48066 632 aa20.58■□□□□ 0.89
TNFRSF1B-202ENST00000489921 VAMP7P51809 220 aa20.58■□□□□ 0.89
TNFRSF1B-202ENST00000489921 DMC1Q14565 340 aa20.58■□□□□ 0.89
TNFRSF1B-202ENST00000489921 ZCWPW2Q504Y3 356 aa20.58■□□□□ 0.89
TNFRSF1B-202ENST00000489921 PRR23CQ6ZRP0 262 aa20.58■□□□□ 0.89
TNFRSF1B-202ENST00000489921 UNC93AQ86WB7 457 aa20.58■□□□□ 0.89
TNFRSF1B-202ENST00000489921 C12orf40Q86WS4 652 aa20.58■□□□□ 0.89
TNFRSF1B-202ENST00000489921 PDZD8Q8NEN9 1154 aa20.58■□□□□ 0.89
TNFRSF1B-202ENST00000489921 SLC2A14Q8TDB8 520 aa20.58■□□□□ 0.89
TNFRSF1B-202ENST00000489921 USP33Q8TEY7 942 aa20.58■□□□□ 0.89
TNFRSF1B-202ENST00000489921 WBP2Q969T9 261 aa20.58■□□□□ 0.89
TNFRSF1B-202ENST00000489921 EXOC4Q96A65 974 aa20.58■□□□□ 0.89
TNFRSF1B-202ENST00000489921 ZC3H10Q96K80 434 aaKnown RBP20.58■□□□□ 0.89
TNFRSF1B-202ENST00000489921 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.58■□□□□ 0.89
TNFRSF1B-202ENST00000489921 AXIN1O15169 862 aa20.57■□□□□ 0.88
TNFRSF1B-202ENST00000489921 ZNF202O95125 648 aa20.57■□□□□ 0.88
TNFRSF1B-202ENST00000489921 TRIM49P0CI25 452 aa20.57■□□□□ 0.88
TNFRSF1B-202ENST00000489921 TRIM49CP0CI26 452 aa20.57■□□□□ 0.88
TNFRSF1B-202ENST00000489921 MBL2P11226 248 aaPredicted RBP20.57■□□□□ 0.88
TNFRSF1B-202ENST00000489921 NR2F2P24468 414 aa20.57■□□□□ 0.88
TNFRSF1B-202ENST00000489921 INCA1Q0VD86 236 aa20.57■□□□□ 0.88
TNFRSF1B-202ENST00000489921 CACNA2D4Q7Z3S7 1137 aa20.57■□□□□ 0.88
TNFRSF1B-202ENST00000489921 GUF1Q8N442 669 aaKnown RBP20.57■□□□□ 0.88
TNFRSF1B-202ENST00000489921 TAS1R2Q8TE23 839 aa20.57■□□□□ 0.88
TNFRSF1B-202ENST00000489921 SCAND2PQ9GZW5 306 aaPredicted RBP20.57■□□□□ 0.88
TNFRSF1B-202ENST00000489921 GDPD2Q9HCC8 539 aa20.57■□□□□ 0.88
TNFRSF1B-202ENST00000489921 KRT82Q9NSB4 513 aa20.57■□□□□ 0.88
TNFRSF1B-202ENST00000489921 COMMD8Q9NX08 183 aa20.57■□□□□ 0.88
TNFRSF1B-202ENST00000489921 GMIPQ9P107 970 aa20.57■□□□□ 0.88
TNFRSF1B-202ENST00000489921 EBF1Q9UH73 591 aa20.57■□□□□ 0.88
TNFRSF1B-202ENST00000489921 CDV3Q9UKY7 258 aaKnown RBP20.57■□□□□ 0.88
TNFRSF1B-202ENST00000489921 ATP8B3O60423 1300 aa20.56■□□□□ 0.88
TNFRSF1B-202ENST00000489921 A0A0A0MRY4 1105 aa20.56■□□□□ 0.88
TNFRSF1B-202ENST00000489921 DCDC2BA2VCK2 349 aa20.56■□□□□ 0.88
TNFRSF1B-202ENST00000489921 HHLA1C9JL84 531 aa20.56■□□□□ 0.88
TNFRSF1B-202ENST00000489921 P4HA1P13674 534 aa20.56■□□□□ 0.88
TNFRSF1B-202ENST00000489921 GCLMP48507 274 aa20.56■□□□□ 0.88
TNFRSF1B-202ENST00000489921 TUBP50607 506 aa20.56■□□□□ 0.88
TNFRSF1B-202ENST00000489921 HECTD3Q5T447 861 aa20.56■□□□□ 0.88
TNFRSF1B-202ENST00000489921 GPRIN1Q7Z2K8 1008 aa20.56■□□□□ 0.88
TNFRSF1B-202ENST00000489921 WHAMMQ8TF30 809 aa20.56■□□□□ 0.88
TNFRSF1B-202ENST00000489921 LOXL4Q96JB6 756 aa20.56■□□□□ 0.88
TNFRSF1B-202ENST00000489921 RTKNQ9BST9 563 aa20.56■□□□□ 0.88
TNFRSF1B-202ENST00000489921 ARRDC1-AS1Q9H2J1 176 aa20.56■□□□□ 0.88
TNFRSF1B-202ENST00000489921 FAM49BQ9NUQ9 324 aa20.56■□□□□ 0.88
TNFRSF1B-202ENST00000489921 E2F8A0AVK6 867 aa20.55■□□□□ 0.88
TNFRSF1B-202ENST00000489921 SLC9A3R1O14745 358 aaPredicted RBP20.55■□□□□ 0.88
TNFRSF1B-202ENST00000489921 GREM1O60565 184 aa20.55■□□□□ 0.88
TNFRSF1B-202ENST00000489921 EPN2O95208 641 aa20.55■□□□□ 0.88
TNFRSF1B-202ENST00000489921 PIK3CAP42336 1068 aa20.55■□□□□ 0.88
TNFRSF1B-202ENST00000489921 SEC13P55735 322 aa20.55■□□□□ 0.88
TNFRSF1B-202ENST00000489921 MAP3K7CLP57077 242 aa20.55■□□□□ 0.88
TNFRSF1B-202ENST00000489921 ENPEPQ07075 957 aa20.55■□□□□ 0.88
TNFRSF1B-202ENST00000489921 PLK5Q496M5 336 aa20.55■□□□□ 0.88
TNFRSF1B-202ENST00000489921 C2orf27AQ580R0 203 aa20.55■□□□□ 0.88
TNFRSF1B-202ENST00000489921 PLA2G2CQ5R387 149 aa20.55■□□□□ 0.88
TNFRSF1B-202ENST00000489921 INTS8Q75QN2 995 aaKnown RBP20.55■□□□□ 0.88
TNFRSF1B-202ENST00000489921 DDX42Q86XP3 938 aaKnown RBP eCLIP20.55■□□□□ 0.88
TNFRSF1B-202ENST00000489921 PHTF2Q8N3S3 785 aa20.55■□□□□ 0.88
TNFRSF1B-202ENST00000489921 HNRNPABQ99729 332 aaKnown RBP20.55■□□□□ 0.88
TNFRSF1B-202ENST00000489921 DUSP9Q99956 384 aaKnown RBP20.55■□□□□ 0.88
TNFRSF1B-202ENST00000489921 DUSP15Q9H1R2 295 aaPredicted RBP20.55■□□□□ 0.88
TNFRSF1B-202ENST00000489921 OSER1Q9NX31 292 aa20.55■□□□□ 0.88
TNFRSF1B-202ENST00000489921 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.54■□□□□ 0.88
TNFRSF1B-202ENST00000489921 SLC30A4O14863 429 aa20.54■□□□□ 0.88
TNFRSF1B-202ENST00000489921 DCLK1O15075 740 aa20.54■□□□□ 0.88
TNFRSF1B-202ENST00000489921 CLSTN1O94985 981 aa20.54■□□□□ 0.88
TNFRSF1B-202ENST00000489921 KIF20AO95235 890 aa20.54■□□□□ 0.88
TNFRSF1B-202ENST00000489921 APBB3O95704 486 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms