RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 NMUR1Q9HB89 426 aa12.55□□□□□ -0.4
SRSF4-204ENST00000489898 DMAP1Q9NPF5 467 aaPredicted RBP12.55□□□□□ -0.4
SRSF4-204ENST00000489898 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.55□□□□□ -0.4
SRSF4-204ENST00000489898 FAM49BQ9NUQ9 324 aa12.55□□□□□ -0.4
SRSF4-204ENST00000489898 DLL3Q9NYJ7 618 aa12.55□□□□□ -0.4
SRSF4-204ENST00000489898 GMIPQ9P107 970 aa12.55□□□□□ -0.4
SRSF4-204ENST00000489898 CPQQ9Y646 472 aa12.55□□□□□ -0.4
SRSF4-204ENST00000489898 K7EQS6 105 aa12.54□□□□□ -0.4
SRSF4-204ENST00000489898 DPYSL4O14531 572 aa12.54□□□□□ -0.4
SRSF4-204ENST00000489898 RNF40O75150 1001 aa12.54□□□□□ -0.4
SRSF4-204ENST00000489898 PIK3CAP42336 1068 aa12.54□□□□□ -0.4
SRSF4-204ENST00000489898 PI4KAP42356 2102 aa12.54□□□□□ -0.4
SRSF4-204ENST00000489898 TUBP50607 506 aa12.54□□□□□ -0.4
SRSF4-204ENST00000489898 TRPC3Q13507 836 aa12.54□□□□□ -0.4
SRSF4-204ENST00000489898 INTS8Q75QN2 995 aaKnown RBP12.54□□□□□ -0.4
SRSF4-204ENST00000489898 FILIP1Q7Z7B0 1213 aa12.54□□□□□ -0.4
SRSF4-204ENST00000489898 ETFBKMTQ8IXQ9 262 aa12.54□□□□□ -0.4
SRSF4-204ENST00000489898 NUP93Q8N1F7 819 aa12.54□□□□□ -0.4
SRSF4-204ENST00000489898 SYNPOQ8N3V7 929 aa12.54□□□□□ -0.4
SRSF4-204ENST00000489898 OVCA2Q8WZ82 227 aa12.54□□□□□ -0.4
SRSF4-204ENST00000489898 TAF4BQ92750 862 aa12.54□□□□□ -0.4
SRSF4-204ENST00000489898 SLC35C1Q96A29 364 aa12.54□□□□□ -0.4
SRSF4-204ENST00000489898 SMARCD1Q96GM5 515 aa12.54□□□□□ -0.4
SRSF4-204ENST00000489898 TMEM8AQ9HCN3 771 aa12.54□□□□□ -0.4
SRSF4-204ENST00000489898 CD248Q9HCU0 757 aa12.54□□□□□ -0.4
SRSF4-204ENST00000489898 DUS2Q9NX74 493 aaKnown RBP12.54□□□□□ -0.4
SRSF4-204ENST00000489898 COQ4Q9Y3A0 265 aa12.54□□□□□ -0.4
SRSF4-204ENST00000489898 PCDHA5Q9Y5H7 936 aa12.54□□□□□ -0.4
SRSF4-204ENST00000489898 FREM2Q5SZK8 3169 aa12.53□□□□□ -0.4
SRSF4-204ENST00000489898 CYP26A1O43174 497 aa12.53□□□□□ -0.4
SRSF4-204ENST00000489898 CALUO43852 315 aaPredicted RBP12.53□□□□□ -0.4
SRSF4-204ENST00000489898 GADD45BO75293 160 aaPredicted RBP12.53□□□□□ -0.4
SRSF4-204ENST00000489898 AP1G2O75843 785 aa12.53□□□□□ -0.4
SRSF4-204ENST00000489898 HDCP19113 662 aa12.53□□□□□ -0.4
SRSF4-204ENST00000489898 CXCL12P48061 93 aa12.53□□□□□ -0.4
SRSF4-204ENST00000489898 GALK1P51570 392 aa12.53□□□□□ -0.4
SRSF4-204ENST00000489898 TAF12Q16514 161 aa12.53□□□□□ -0.4
SRSF4-204ENST00000489898 SGSM1Q2NKQ1 1148 aa12.53□□□□□ -0.4
SRSF4-204ENST00000489898 SCD5Q86SK9 330 aa12.53□□□□□ -0.4
SRSF4-204ENST00000489898 WDR5BQ86VZ2 330 aa12.53□□□□□ -0.4
SRSF4-204ENST00000489898 UNC93AQ86WB7 457 aa12.53□□□□□ -0.4
SRSF4-204ENST00000489898 KIAA2013Q8IYS2 634 aa12.53□□□□□ -0.4
SRSF4-204ENST00000489898 ATP2A3Q93084 1043 aa12.53□□□□□ -0.4
SRSF4-204ENST00000489898 MED15Q96RN5 788 aa12.53□□□□□ -0.4
SRSF4-204ENST00000489898 HNRNPABQ99729 332 aaKnown RBP12.53□□□□□ -0.4
SRSF4-204ENST00000489898 ZSWIM1Q9BR11 485 aa12.53□□□□□ -0.4
SRSF4-204ENST00000489898 CYLDQ9NQC7 956 aa12.53□□□□□ -0.4
SRSF4-204ENST00000489898 SMPD4Q9NXE4 827 aa12.53□□□□□ -0.4
SRSF4-204ENST00000489898 TRPM5Q9NZQ8 1165 aa12.53□□□□□ -0.4
SRSF4-204ENST00000489898 CNOT1A5YKK6 2376 aaKnown RBP12.52□□□□□ -0.4
SRSF4-204ENST00000489898 EPG5Q9HCE0 2579 aa12.52□□□□□ -0.4
SRSF4-204ENST00000489898 TULP1O00294 542 aaPredicted RBP12.52□□□□□ -0.41
SRSF4-204ENST00000489898 GABBR2O75899 941 aa12.52□□□□□ -0.41
SRSF4-204ENST00000489898 RAD23BP54727 409 aa12.52□□□□□ -0.41
SRSF4-204ENST00000489898 ZNF658Q5TYW1 1059 aaPredicted RBP12.52□□□□□ -0.41
SRSF4-204ENST00000489898 ANKRD40Q6AI12 368 aa12.52□□□□□ -0.41
SRSF4-204ENST00000489898 TTI2Q6NXR4 508 aa12.52□□□□□ -0.41
SRSF4-204ENST00000489898 RHBDF2Q6PJF5 856 aa12.52□□□□□ -0.41
SRSF4-204ENST00000489898 TTC30AQ86WT1 665 aa12.52□□□□□ -0.41
SRSF4-204ENST00000489898 SLC4A11Q8NBS3 891 aa12.52□□□□□ -0.41
SRSF4-204ENST00000489898 LMO3Q8TAP4 145 aa12.52□□□□□ -0.41
SRSF4-204ENST00000489898 FBXO32Q969P5 355 aa12.52□□□□□ -0.41
SRSF4-204ENST00000489898 P2RY13Q9BPV8 354 aa12.52□□□□□ -0.41
SRSF4-204ENST00000489898 MAN1B1Q9UKM7 699 aa12.52□□□□□ -0.41
SRSF4-204ENST00000489898 ATP6V1DQ9Y5K8 247 aa12.52□□□□□ -0.41
SRSF4-204ENST00000489898 USP3Q9Y6I4 520 aa12.52□□□□□ -0.41
SRSF4-204ENST00000489898 CACNA1EQ15878 2313 aa12.51□□□□□ -0.41
SRSF4-204ENST00000489898 LAMA5O15230 3695 aa12.51□□□□□ -0.41
SRSF4-204ENST00000489898 TULP2O00295 520 aa12.51□□□□□ -0.41
SRSF4-204ENST00000489898 SLC16A3O15427 465 aaKnown RBP12.51□□□□□ -0.41
SRSF4-204ENST00000489898 PHACTR2O75167 634 aa12.51□□□□□ -0.41
SRSF4-204ENST00000489898 ANXA13P27216 316 aa12.51□□□□□ -0.41
SRSF4-204ENST00000489898 YWHAQP27348 245 aa12.51□□□□□ -0.41
SRSF4-204ENST00000489898 PSMC2P35998 433 aaKnown RBP12.51□□□□□ -0.41
SRSF4-204ENST00000489898 KIR2DL1P43626 348 aaPredicted RBP12.51□□□□□ -0.41
SRSF4-204ENST00000489898 PPP3CCP48454 512 aa12.51□□□□□ -0.41
SRSF4-204ENST00000489898 IFNAR2P48551 515 aa12.51□□□□□ -0.41
SRSF4-204ENST00000489898 PXNP49023 591 aaPredicted RBP12.51□□□□□ -0.41
SRSF4-204ENST00000489898 MXI1P50539 228 aa12.51□□□□□ -0.41
SRSF4-204ENST00000489898 IFRD2Q12894 506 aaPredicted RBP12.51□□□□□ -0.41
SRSF4-204ENST00000489898 ADAM9Q13443 819 aa12.51□□□□□ -0.41
SRSF4-204ENST00000489898 DHCR24Q15392 516 aa12.51□□□□□ -0.41
SRSF4-204ENST00000489898 LPAL2Q16609 132 aa12.51□□□□□ -0.41
SRSF4-204ENST00000489898 PPP1R26Q5T8A7 1209 aaPredicted RBP12.51□□□□□ -0.41
SRSF4-204ENST00000489898 Q6ZNB5 142 aa12.51□□□□□ -0.41
SRSF4-204ENST00000489898 LONP2Q86WA8 852 aa12.51□□□□□ -0.41
SRSF4-204ENST00000489898 BBS7Q8IWZ6 715 aa12.51□□□□□ -0.41
SRSF4-204ENST00000489898 ELOA2Q8IYF1 753 aaPredicted RBP12.51□□□□□ -0.41
SRSF4-204ENST00000489898 ADGRG2Q8IZP9 1017 aa12.51□□□□□ -0.41
SRSF4-204ENST00000489898 CPA6Q8N4T0 437 aa12.51□□□□□ -0.41
SRSF4-204ENST00000489898 RPLP0P6Q8NHW5 317 aa12.51□□□□□ -0.41
SRSF4-204ENST00000489898 USP33Q8TEY7 942 aa12.51□□□□□ -0.41
SRSF4-204ENST00000489898 CD101Q93033 1021 aa12.51□□□□□ -0.41
SRSF4-204ENST00000489898 TATDN2Q93075 761 aa12.51□□□□□ -0.41
SRSF4-204ENST00000489898 TNIP3Q96KP6 325 aa12.51□□□□□ -0.41
SRSF4-204ENST00000489898 TIGD1Q96MW7 591 aa12.51□□□□□ -0.41
SRSF4-204ENST00000489898 GSDMAQ96QA5 445 aa12.51□□□□□ -0.41
SRSF4-204ENST00000489898 CYP3A43Q9HB55 503 aa12.51□□□□□ -0.41
SRSF4-204ENST00000489898 PNPLA8Q9NP80 782 aa12.51□□□□□ -0.41
SRSF4-204ENST00000489898 THG1LQ9NWX6 298 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms