RNA–Protein interactions for RNA: ENST00000489633.1

NEK2-204, Transcript of NIMA related kinase 2, humanhuman

TSL 2

Gene NEK2, Length 661 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK2-204ENST00000489633 CGRRF1Q99675 332 aa3.56□□□□□ -1.84
NEK2-204ENST00000489633 C17orf80Q9BSJ5 609 aa3.56□□□□□ -1.84
NEK2-204ENST00000489633 PCDH12Q9NPG4 1184 aa3.56□□□□□ -1.84
NEK2-204ENST00000489633 TMEM184CQ9NVA4 438 aa3.56□□□□□ -1.84
NEK2-204ENST00000489633 MED16Q9Y2X0 877 aa3.56□□□□□ -1.84
NEK2-204ENST00000489633 COL4A3BPQ9Y5P4 624 aa3.56□□□□□ -1.84
NEK2-204ENST00000489633 LRP5O75197 1615 aa3.55□□□□□ -1.84
NEK2-204ENST00000489633 BAZ1BQ9UIG0 1483 aaKnown RBP3.55□□□□□ -1.84
NEK2-204ENST00000489633 PMPCBO75439 489 aa3.55□□□□□ -1.84
NEK2-204ENST00000489633 ABLIM3O94929 683 aa3.55□□□□□ -1.84
NEK2-204ENST00000489633 TMEM191BP0C7N4 346 aa3.55□□□□□ -1.84
NEK2-204ENST00000489633 CYP2C9P11712 490 aa3.55□□□□□ -1.84
NEK2-204ENST00000489633 COPB1P53618 953 aaKnown RBP3.55□□□□□ -1.84
NEK2-204ENST00000489633 HTRA4P83105 476 aaPredicted RBP3.55□□□□□ -1.84
NEK2-204ENST00000489633 MLC1Q15049 377 aa3.55□□□□□ -1.84
NEK2-204ENST00000489633 SEC23BQ15437 767 aa3.55□□□□□ -1.84
NEK2-204ENST00000489633 MIDNQ504T8 468 aa3.55□□□□□ -1.84
NEK2-204ENST00000489633 PLA1AQ53H76 456 aa3.55□□□□□ -1.84
NEK2-204ENST00000489633 ZNF398Q8TD17 642 aa3.55□□□□□ -1.84
NEK2-204ENST00000489633 BPIFB1Q8TDL5 484 aa3.55□□□□□ -1.84
NEK2-204ENST00000489633 PNISRQ8TF01 805 aaKnown RBP3.55□□□□□ -1.84
NEK2-204ENST00000489633 RAPGEF4Q8WZA2 1011 aa3.55□□□□□ -1.84
NEK2-204ENST00000489633 MAP4K1Q92918 833 aa3.55□□□□□ -1.84
NEK2-204ENST00000489633 PPP2R3CQ969Q6 453 aa3.55□□□□□ -1.84
NEK2-204ENST00000489633 MTFMTQ96DP5 389 aaKnown RBP3.55□□□□□ -1.84
NEK2-204ENST00000489633 SIGLEC11Q96RL6 698 aa3.55□□□□□ -1.84
NEK2-204ENST00000489633 MAP3K14Q99558 947 aa3.55□□□□□ -1.84
NEK2-204ENST00000489633 GBA2Q9HCG7 927 aaPredicted RBP3.55□□□□□ -1.84
NEK2-204ENST00000489633 CNNM1Q9NRU3 951 aa3.55□□□□□ -1.84
NEK2-204ENST00000489633 HOMER2Q9NSB8 354 aa3.55□□□□□ -1.84
NEK2-204ENST00000489633 PPRC1Q5VV67 1664 aaKnown RBP3.55□□□□□ -1.84
NEK2-204ENST00000489633 MADDQ8WXG6 1647 aa3.55□□□□□ -1.84
NEK2-204ENST00000489633 CD8B2A6NJW9 211 aa3.54□□□□□ -1.84
NEK2-204ENST00000489633 BTBD19C9JJ37 291 aa3.54□□□□□ -1.84
NEK2-204ENST00000489633 MT-CO3P00414 261 aa3.54□□□□□ -1.84
NEK2-204ENST00000489633 ALPLP05186 524 aa3.54□□□□□ -1.84
NEK2-204ENST00000489633 GKP32189 559 aa3.54□□□□□ -1.84
NEK2-204ENST00000489633 WNT3P56703 355 aa3.54□□□□□ -1.84
NEK2-204ENST00000489633 RAB1AP62820 205 aa3.54□□□□□ -1.84
NEK2-204ENST00000489633 LMAN2Q12907 356 aa3.54□□□□□ -1.84
NEK2-204ENST00000489633 CTBP1Q13363 440 aa3.54□□□□□ -1.84
NEK2-204ENST00000489633 ZNF267Q14586 743 aaPredicted RBP3.54□□□□□ -1.84
NEK2-204ENST00000489633 PTPROQ16827 1216 aa3.54□□□□□ -1.84
NEK2-204ENST00000489633 LEXMQ3ZCV2 418 aa3.54□□□□□ -1.84
NEK2-204ENST00000489633 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.54□□□□□ -1.84
NEK2-204ENST00000489633 KIAA1161Q6NSJ0 714 aa3.54□□□□□ -1.84
NEK2-204ENST00000489633 PIP4P1Q86T03 277 aa3.54□□□□□ -1.84
NEK2-204ENST00000489633 GAS2L3Q86XJ1 694 aa3.54□□□□□ -1.84
NEK2-204ENST00000489633 SFTPA1Q8IWL2 248 aa3.54□□□□□ -1.84
NEK2-204ENST00000489633 ZNF548Q8NEK5 533 aaPredicted RBP3.54□□□□□ -1.84
NEK2-204ENST00000489633 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.54□□□□□ -1.84
NEK2-204ENST00000489633 HPS3Q969F9 1004 aa3.54□□□□□ -1.84
NEK2-204ENST00000489633 NT5C1BQ96P26 610 aa3.54□□□□□ -1.84
NEK2-204ENST00000489633 MS4A7Q9GZW8 240 aaPredicted RBP3.54□□□□□ -1.84
NEK2-204ENST00000489633 NOP58Q9Y2X3 529 aaKnown RBP3.54□□□□□ -1.84
NEK2-204ENST00000489633 TDRD9Q8NDG6 1382 aaKnown RBP3.53□□□□□ -1.84
NEK2-204ENST00000489633 A0A087WWL8 130 aa3.53□□□□□ -1.84
NEK2-204ENST00000489633 ANKRD62A6NC57 917 aa3.53□□□□□ -1.84
NEK2-204ENST00000489633 FAM90A10PA6NDY2 464 aa3.53□□□□□ -1.84
NEK2-204ENST00000489633 TMEM233B4DJY2 109 aa3.53□□□□□ -1.84
NEK2-204ENST00000489633 H3BNX3 289 aa3.53□□□□□ -1.84
NEK2-204ENST00000489633 PSMD9O00233 223 aa3.53□□□□□ -1.84
NEK2-204ENST00000489633 RNF8O76064 485 aa3.53□□□□□ -1.84
NEK2-204ENST00000489633 THP07101 528 aa3.53□□□□□ -1.84
NEK2-204ENST00000489633 XRCC6P12956 609 aaKnown RBP eCLIP3.53□□□□□ -1.84
NEK2-204ENST00000489633 APEHP13798 732 aaKnown RBP3.53□□□□□ -1.84
NEK2-204ENST00000489633 NPR1P16066 1061 aa3.53□□□□□ -1.84
NEK2-204ENST00000489633 HSPA6P17066 643 aa3.53□□□□□ -1.84
NEK2-204ENST00000489633 AKAP5P24588 427 aa3.53□□□□□ -1.84
NEK2-204ENST00000489633 DIO1P49895 249 aa3.53□□□□□ -1.84
NEK2-204ENST00000489633 HTR6P50406 440 aa3.53□□□□□ -1.84
NEK2-204ENST00000489633 NANOS2P60321 138 aaKnown RBP3.53□□□□□ -1.84
NEK2-204ENST00000489633 SUMO2P61956 95 aaKnown RBP3.53□□□□□ -1.84
NEK2-204ENST00000489633 FGL2Q14314 439 aa3.53□□□□□ -1.84
NEK2-204ENST00000489633 LMBRD2Q68DH5 695 aaPredicted RBP3.53□□□□□ -1.84
NEK2-204ENST00000489633 ZNF772Q68DY9 489 aaPredicted RBP3.53□□□□□ -1.84
NEK2-204ENST00000489633 TMEM65Q6PI78 240 aa3.53□□□□□ -1.84
NEK2-204ENST00000489633 ZBTB46Q86UZ6 589 aa3.53□□□□□ -1.84
NEK2-204ENST00000489633 MPP5Q8N3R9 675 aa3.53□□□□□ -1.84
NEK2-204ENST00000489633 ACRBPQ8NEB7 543 aa3.53□□□□□ -1.84
NEK2-204ENST00000489633 MARK4Q96L34 752 aa3.53□□□□□ -1.84
NEK2-204ENST00000489633 PIH1D1Q9NWS0 290 aaKnown RBP3.53□□□□□ -1.84
NEK2-204ENST00000489633 PI4KBQ9UBF8 816 aa3.53□□□□□ -1.84
NEK2-204ENST00000489633 HEY2Q9UBP5 337 aa3.53□□□□□ -1.84
NEK2-204ENST00000489633 IP6K2Q9UHH9 426 aa3.53□□□□□ -1.84
NEK2-204ENST00000489633 DRG1Q9Y295 367 aaKnown RBP3.53□□□□□ -1.84
NEK2-204ENST00000489633 SQORQ9Y6N5 450 aa3.53□□□□□ -1.84
NEK2-204ENST00000489633 TNS2Q63HR2 1409 aa3.53□□□□□ -1.85
NEK2-204ENST00000489633 BTN3A1O00481 513 aa3.52□□□□□ -1.85
NEK2-204ENST00000489633 PPM1GO15355 546 aaPredicted RBP3.52□□□□□ -1.85
NEK2-204ENST00000489633 PSG1P11464 419 aa3.52□□□□□ -1.85
NEK2-204ENST00000489633 THBS3P49746 956 aa3.52□□□□□ -1.85
NEK2-204ENST00000489633 ANAPC15P60006 121 aa3.52□□□□□ -1.85
NEK2-204ENST00000489633 LARS2Q15031 903 aaKnown RBP3.52□□□□□ -1.85
NEK2-204ENST00000489633 TWIST1Q15672 202 aa3.52□□□□□ -1.85
NEK2-204ENST00000489633 ATAT1Q5SQI0 421 aa3.52□□□□□ -1.85
NEK2-204ENST00000489633 TMTC4Q5T4D3 741 aa3.52□□□□□ -1.85
NEK2-204ENST00000489633 PTCHD4Q6ZW05 846 aa3.52□□□□□ -1.85
NEK2-204ENST00000489633 COL23A1Q86Y22 540 aaPredicted RBP3.52□□□□□ -1.85
NEK2-204ENST00000489633 MAFAQ8NHW3 353 aaPredicted RBP3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms