RNA–Protein interactions for RNA: ENST00000489434.3

SFXN3-207, Transcript of sideroflexin 3, humanhuman

TSL 3

Gene SFXN3, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-207ENST00000489434 STX6O43752 255 aa12.67□□□□□ -0.38
SFXN3-207ENST00000489434 PPP6R2O75170 966 aa12.67□□□□□ -0.38
SFXN3-207ENST00000489434 STAU1O95793 577 aaKnown RBP12.67□□□□□ -0.38
SFXN3-207ENST00000489434 CST3P01034 146 aaPredicted RBP12.67□□□□□ -0.38
SFXN3-207ENST00000489434 CEACAM1P13688 526 aa12.67□□□□□ -0.38
SFXN3-207ENST00000489434 HOXD13P35453 343 aa12.67□□□□□ -0.38
SFXN3-207ENST00000489434 TIE1P35590 1138 aa12.67□□□□□ -0.38
SFXN3-207ENST00000489434 ZXDBP98169 803 aa12.67□□□□□ -0.38
SFXN3-207ENST00000489434 GAD2Q05329 585 aa12.67□□□□□ -0.38
SFXN3-207ENST00000489434 ZNF252P-AS1Q0IIN9 211 aa12.67□□□□□ -0.38
SFXN3-207ENST00000489434 BIRC3Q13489 604 aa12.67□□□□□ -0.38
SFXN3-207ENST00000489434 GAB4Q2WGN9 574 aa12.67□□□□□ -0.38
SFXN3-207ENST00000489434 SPDYCQ5MJ68 293 aa12.67□□□□□ -0.38
SFXN3-207ENST00000489434 HECTD3Q5T447 861 aa12.67□□□□□ -0.38
SFXN3-207ENST00000489434 SH3PXD2AQ5TCZ1 1133 aa12.67□□□□□ -0.38
SFXN3-207ENST00000489434 CNNM4Q6P4Q7 775 aa12.67□□□□□ -0.38
SFXN3-207ENST00000489434 RHBDF2Q6PJF5 856 aa12.67□□□□□ -0.38
SFXN3-207ENST00000489434 EPM2AIP1Q7L775 607 aaPredicted RBP12.67□□□□□ -0.38
SFXN3-207ENST00000489434 TRMT11Q7Z4G4 463 aaKnown RBP12.67□□□□□ -0.38
SFXN3-207ENST00000489434 PGBD3Q8N328 593 aa12.67□□□□□ -0.38
SFXN3-207ENST00000489434 IL17RCQ8NAC3 791 aa12.67□□□□□ -0.38
SFXN3-207ENST00000489434 LINC00301Q8NCQ3 95 aa12.67□□□□□ -0.38
SFXN3-207ENST00000489434 GOLGA5Q8TBA6 731 aa12.67□□□□□ -0.38
SFXN3-207ENST00000489434 KCNV2Q8TDN2 545 aa12.67□□□□□ -0.38
SFXN3-207ENST00000489434 TNIP3Q96KP6 325 aa12.67□□□□□ -0.38
SFXN3-207ENST00000489434 MED10Q9BTT4 135 aa12.67□□□□□ -0.38
SFXN3-207ENST00000489434 NUSAP1Q9BXS6 441 aaKnown RBP12.67□□□□□ -0.38
SFXN3-207ENST00000489434 B3GNT5Q9BYG0 378 aa12.67□□□□□ -0.38
SFXN3-207ENST00000489434 SH3BP1Q9Y3L3 701 aa12.67□□□□□ -0.38
SFXN3-207ENST00000489434 ASCC3Q8N3C0 2202 aaKnown RBP12.67□□□□□ -0.38
SFXN3-207ENST00000489434 A0A0A0MRY4 1105 aa12.66□□□□□ -0.38
SFXN3-207ENST00000489434 TBC1D3BA6NDS4 549 aa12.66□□□□□ -0.38
SFXN3-207ENST00000489434 TNFRSF10BO14763 440 aa12.66□□□□□ -0.38
SFXN3-207ENST00000489434 CLIC2O15247 247 aa12.66□□□□□ -0.38
SFXN3-207ENST00000489434 TGFB1I1O43294 461 aa12.66□□□□□ -0.38
SFXN3-207ENST00000489434 EXOC3O60645 756 aa12.66□□□□□ -0.38
SFXN3-207ENST00000489434 CUTAO60888 179 aa12.66□□□□□ -0.38
SFXN3-207ENST00000489434 PROS1P07225 676 aa12.66□□□□□ -0.38
SFXN3-207ENST00000489434 P4HA1P13674 534 aa12.66□□□□□ -0.38
SFXN3-207ENST00000489434 TRIM21P19474 475 aaKnown RBP12.66□□□□□ -0.38
SFXN3-207ENST00000489434 CSRP1P21291 193 aaKnown RBP12.66□□□□□ -0.38
SFXN3-207ENST00000489434 BCKDHBP21953 392 aa12.66□□□□□ -0.38
SFXN3-207ENST00000489434 P2RY2P41231 377 aa12.66□□□□□ -0.38
SFXN3-207ENST00000489434 SLC6A11P48066 632 aa12.66□□□□□ -0.38
SFXN3-207ENST00000489434 AP3M2P53677 418 aa12.66□□□□□ -0.38
SFXN3-207ENST00000489434 MYL6P60660 151 aa12.66□□□□□ -0.38
SFXN3-207ENST00000489434 IRX4P78413 519 aa12.66□□□□□ -0.38
SFXN3-207ENST00000489434 KDSRQ06136 332 aa12.66□□□□□ -0.38
SFXN3-207ENST00000489434 E2F4Q16254 413 aa12.66□□□□□ -0.38
SFXN3-207ENST00000489434 UAP1L1Q3KQV9 507 aa12.66□□□□□ -0.38
SFXN3-207ENST00000489434 LY6G5CQ5SRR4 150 aa12.66□□□□□ -0.38
SFXN3-207ENST00000489434 TMEM92Q6UXU6 159 aa12.66□□□□□ -0.38
SFXN3-207ENST00000489434 SYT12Q8IV01 421 aa12.66□□□□□ -0.38
SFXN3-207ENST00000489434 NELFCDQ8IXH7 590 aa12.66□□□□□ -0.38
SFXN3-207ENST00000489434 OLIG1Q8TAK6 271 aa12.66□□□□□ -0.38
SFXN3-207ENST00000489434 HMGB4Q8WW32 186 aa12.66□□□□□ -0.38
SFXN3-207ENST00000489434 SMARCD1Q96GM5 515 aa12.66□□□□□ -0.38
SFXN3-207ENST00000489434 C7orf25Q9BPX7 421 aa12.66□□□□□ -0.38
SFXN3-207ENST00000489434 DPEP3Q9H4B8 488 aa12.66□□□□□ -0.38
SFXN3-207ENST00000489434 DMAP1Q9NPF5 467 aaPredicted RBP12.66□□□□□ -0.38
SFXN3-207ENST00000489434 DEC1Q9P2X7 70 aa12.66□□□□□ -0.38
SFXN3-207ENST00000489434 EVLQ9UI08 416 aaPredicted RBP12.66□□□□□ -0.38
SFXN3-207ENST00000489434 MYH10P35580 1976 aa12.65□□□□□ -0.38
SFXN3-207ENST00000489434 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.65□□□□□ -0.38
SFXN3-207ENST00000489434 TCRBV21S2A2A0A5A6 115 aa12.65□□□□□ -0.38
SFXN3-207ENST00000489434 SGK1O00141 431 aa12.65□□□□□ -0.38
SFXN3-207ENST00000489434 CLDN5O00501 218 aa12.65□□□□□ -0.38
SFXN3-207ENST00000489434 COCHO43405 550 aa12.65□□□□□ -0.38
SFXN3-207ENST00000489434 HOXD12P35452 270 aa12.65□□□□□ -0.38
SFXN3-207ENST00000489434 TUBP50607 506 aa12.65□□□□□ -0.38
SFXN3-207ENST00000489434 CACNA2D1P54289 1103 aa12.65□□□□□ -0.38
SFXN3-207ENST00000489434 FOXC1Q12948 553 aa12.65□□□□□ -0.38
SFXN3-207ENST00000489434 ZNF699Q32M78 642 aa12.65□□□□□ -0.38
SFXN3-207ENST00000489434 TRIM61Q5EBN2 209 aa12.65□□□□□ -0.38
SFXN3-207ENST00000489434 ZNF667Q5HYK9 610 aa12.65□□□□□ -0.38
SFXN3-207ENST00000489434 UNC13DQ70J99 1090 aa12.65□□□□□ -0.38
SFXN3-207ENST00000489434 TMEFF1Q8IYR6 380 aa12.65□□□□□ -0.38
SFXN3-207ENST00000489434 SCFD1Q8WVM8 642 aa12.65□□□□□ -0.38
SFXN3-207ENST00000489434 XYLT2Q9H1B5 865 aa12.65□□□□□ -0.38
SFXN3-207ENST00000489434 SLC32A1Q9H598 525 aa12.65□□□□□ -0.38
SFXN3-207ENST00000489434 COMMD8Q9NX08 183 aa12.65□□□□□ -0.38
SFXN3-207ENST00000489434 TFIP11Q9UBB9 837 aaKnown RBP12.65□□□□□ -0.38
SFXN3-207ENST00000489434 CHORDC1Q9UHD1 332 aaPredicted RBP12.65□□□□□ -0.38
SFXN3-207ENST00000489434 PCNX2A6NKB5 2137 aa12.65□□□□□ -0.38
SFXN3-207ENST00000489434 ZZEF1O43149 2961 aa12.65□□□□□ -0.38
SFXN3-207ENST00000489434 CACNA1EQ15878 2313 aa12.65□□□□□ -0.39
SFXN3-207ENST00000489434 PATE3B3GLJ2 98 aa12.64□□□□□ -0.39
SFXN3-207ENST00000489434 GIPC1O14908 333 aa12.64□□□□□ -0.39
SFXN3-207ENST00000489434 HOXC11O43248 304 aaPredicted RBP12.64□□□□□ -0.39
SFXN3-207ENST00000489434 AP5Z1O43299 807 aa12.64□□□□□ -0.39
SFXN3-207ENST00000489434 YEATS4O95619 227 aa12.64□□□□□ -0.39
SFXN3-207ENST00000489434 CFIP05156 583 aa12.64□□□□□ -0.39
SFXN3-207ENST00000489434 KIR2DL1P43626 348 aaPredicted RBP12.64□□□□□ -0.39
SFXN3-207ENST00000489434 ATXN3P54252 364 aaPredicted RBP12.64□□□□□ -0.39
SFXN3-207ENST00000489434 GOLGA8FQ08AF8 430 aa12.64□□□□□ -0.39
SFXN3-207ENST00000489434 GOLGA8DPQ0D2H9 430 aa12.64□□□□□ -0.39
SFXN3-207ENST00000489434 NCOA4Q13772 614 aa12.64□□□□□ -0.39
SFXN3-207ENST00000489434 KNOP1Q1ED39 458 aaKnown RBP12.64□□□□□ -0.39
SFXN3-207ENST00000489434 ANO4Q32M45 955 aa12.64□□□□□ -0.39
SFXN3-207ENST00000489434 EMC10Q5UCC4 262 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms