RNA–Protein interactions for RNA: ENST00000489158.1

EXOSC1-211, Transcript of exosome component 1, humanhuman

TSL 2

Gene EXOSC1, Length 2,113 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-211ENST00000489158 ITGA11Q9UKX5 1188 aa9.44□□□□□ -0.9
EXOSC1-211ENST00000489158 ZMYND8Q9ULU4 1186 aaPredicted RBP9.44□□□□□ -0.9
EXOSC1-211ENST00000489158 NAALADL1Q9UQQ1 740 aa9.44□□□□□ -0.9
EXOSC1-211ENST00000489158 LRRC42Q9Y546 428 aa9.44□□□□□ -0.9
EXOSC1-211ENST00000489158 DPPA5A6NC42 116 aa9.44□□□□□ -0.9
EXOSC1-211ENST00000489158 PITPNM1O00562 1244 aa9.44□□□□□ -0.9
EXOSC1-211ENST00000489158 PEX11AO75192 247 aa9.44□□□□□ -0.9
EXOSC1-211ENST00000489158 RECQL4O94761 1208 aa9.44□□□□□ -0.9
EXOSC1-211ENST00000489158 MTA2O94776 668 aa9.44□□□□□ -0.9
EXOSC1-211ENST00000489158 PARNO95453 639 aaKnown RBP9.44□□□□□ -0.9
EXOSC1-211ENST00000489158 CD4P01730 458 aa9.44□□□□□ -0.9
EXOSC1-211ENST00000489158 ITGB3P05106 788 aa9.44□□□□□ -0.9
EXOSC1-211ENST00000489158 KRT5P13647 590 aa9.44□□□□□ -0.9
EXOSC1-211ENST00000489158 TARSP26639 723 aaKnown RBP9.44□□□□□ -0.9
EXOSC1-211ENST00000489158 PCK1P35558 622 aa9.44□□□□□ -0.9
EXOSC1-211ENST00000489158 LPIN1Q14693 890 aa9.44□□□□□ -0.9
EXOSC1-211ENST00000489158 GLRA4Q5JXX5 417 aa9.44□□□□□ -0.9
EXOSC1-211ENST00000489158 ZNF618Q5T7W0 954 aa9.44□□□□□ -0.9
EXOSC1-211ENST00000489158 THEMIS2Q5TEJ8 643 aa9.44□□□□□ -0.9
EXOSC1-211ENST00000489158 ANO7Q6IWH7 933 aa9.44□□□□□ -0.9
EXOSC1-211ENST00000489158 PRUNE1Q86TP1 453 aa9.44□□□□□ -0.9
EXOSC1-211ENST00000489158 LONP2Q86WA8 852 aa9.44□□□□□ -0.9
EXOSC1-211ENST00000489158 SHC3Q92529 594 aa9.44□□□□□ -0.9
EXOSC1-211ENST00000489158 ERP27Q96DN0 273 aa9.44□□□□□ -0.9
EXOSC1-211ENST00000489158 KIF12Q96FN5 646 aa9.44□□□□□ -0.9
EXOSC1-211ENST00000489158 SNF8Q96H20 258 aa9.44□□□□□ -0.9
EXOSC1-211ENST00000489158 TOX2Q96NM4 488 aa9.44□□□□□ -0.9
EXOSC1-211ENST00000489158 ANKRD27Q96NW4 1050 aa9.44□□□□□ -0.9
EXOSC1-211ENST00000489158 SH3GL3Q99963 347 aa9.44□□□□□ -0.9
EXOSC1-211ENST00000489158 VRTNQ9H8Y1 702 aa9.44□□□□□ -0.9
EXOSC1-211ENST00000489158 CHST7Q9NS84 486 aa9.44□□□□□ -0.9
EXOSC1-211ENST00000489158 FAM105AQ9NUU6 356 aa9.44□□□□□ -0.9
EXOSC1-211ENST00000489158 IPPQ9Y573 584 aa9.44□□□□□ -0.9
EXOSC1-211ENST00000489158 FSCN2O14926 492 aa9.43□□□□□ -0.9
EXOSC1-211ENST00000489158 ZNF623O75123 536 aa9.43□□□□□ -0.9
EXOSC1-211ENST00000489158 SPAG7O75391 227 aa9.43□□□□□ -0.9
EXOSC1-211ENST00000489158 TCEA3O75764 348 aa9.43□□□□□ -0.9
EXOSC1-211ENST00000489158 ATP5HO75947 161 aa9.43□□□□□ -0.9
EXOSC1-211ENST00000489158 KCNE1P15382 129 aa9.43□□□□□ -0.9
EXOSC1-211ENST00000489158 IVDP26440 423 aa9.43□□□□□ -0.9
EXOSC1-211ENST00000489158 CD52P31358 61 aa9.43□□□□□ -0.9
EXOSC1-211ENST00000489158 VPS41P49754 854 aa9.43□□□□□ -0.9
EXOSC1-211ENST00000489158 WDR4P57081 412 aaKnown RBP9.43□□□□□ -0.9
EXOSC1-211ENST00000489158 MYL6P60660 151 aa9.43□□□□□ -0.9
EXOSC1-211ENST00000489158 YWHAEP62258 255 aaKnown RBP9.43□□□□□ -0.9
EXOSC1-211ENST00000489158 IL9RQ01113 521 aa9.43□□□□□ -0.9
EXOSC1-211ENST00000489158 CUL2Q13617 745 aa9.43□□□□□ -0.9
EXOSC1-211ENST00000489158 DSC3Q14574 896 aa9.43□□□□□ -0.9
EXOSC1-211ENST00000489158 SETDB1Q15047 1291 aa9.43□□□□□ -0.9
EXOSC1-211ENST00000489158 ZNF699Q32M78 642 aa9.43□□□□□ -0.9
EXOSC1-211ENST00000489158 ALKAL1Q6UXT8 129 aa9.43□□□□□ -0.9
EXOSC1-211ENST00000489158 PPP1R21Q6ZMI0 780 aa9.43□□□□□ -0.9
EXOSC1-211ENST00000489158 ANKRD33Q7Z3H0 272 aa9.43□□□□□ -0.9
EXOSC1-211ENST00000489158 NOP9Q86U38 636 aaKnown RBP9.43□□□□□ -0.9
EXOSC1-211ENST00000489158 AGGF1Q8N302 714 aaeCLIP9.43□□□□□ -0.9
EXOSC1-211ENST00000489158 FAM13CQ8NE31 585 aa9.43□□□□□ -0.9
EXOSC1-211ENST00000489158 BEST2Q8NFU1 509 aa9.43□□□□□ -0.9
EXOSC1-211ENST00000489158 ATG4AQ8WYN0 398 aa9.43□□□□□ -0.9
EXOSC1-211ENST00000489158 LRMDAQ9H2I8 198 aa9.43□□□□□ -0.9
EXOSC1-211ENST00000489158 ACP6Q9NPH0 428 aa9.43□□□□□ -0.9
EXOSC1-211ENST00000489158 KLK14Q9P0G3 267 aa9.43□□□□□ -0.9
EXOSC1-211ENST00000489158 LGALS13Q9UHV8 139 aa9.43□□□□□ -0.9
EXOSC1-211ENST00000489158 ANAPC5Q9UJX4 755 aa9.43□□□□□ -0.9
EXOSC1-211ENST00000489158 PADI3Q9ULW8 664 aa9.43□□□□□ -0.9
EXOSC1-211ENST00000489158 UBQLN1Q9UMX0 589 aaKnown RBP9.43□□□□□ -0.9
EXOSC1-211ENST00000489158 CHKBQ9Y259 395 aa9.43□□□□□ -0.9
EXOSC1-211ENST00000489158 NUB1Q9Y5A7 615 aa9.43□□□□□ -0.9
EXOSC1-211ENST00000489158 CYP26A1O43174 497 aa9.43□□□□□ -0.9
EXOSC1-211ENST00000489158 PDHA1P08559 390 aa9.43□□□□□ -0.9
EXOSC1-211ENST00000489158 TPBGLP0DKB5 382 aa9.43□□□□□ -0.9
EXOSC1-211ENST00000489158 SELPP16109 830 aa9.43□□□□□ -0.9
EXOSC1-211ENST00000489158 GM2AP17900 193 aa9.43□□□□□ -0.9
EXOSC1-211ENST00000489158 CYP3A5P20815 502 aa9.43□□□□□ -0.9
EXOSC1-211ENST00000489158 ADCY8P40145 1251 aa9.43□□□□□ -0.9
EXOSC1-211ENST00000489158 GJA8P48165 433 aa9.43□□□□□ -0.9
EXOSC1-211ENST00000489158 LBX1P52954 281 aa9.43□□□□□ -0.9
EXOSC1-211ENST00000489158 DNAJC3Q13217 504 aa9.43□□□□□ -0.9
EXOSC1-211ENST00000489158 PTK6Q13882 451 aa9.43□□□□□ -0.9
EXOSC1-211ENST00000489158 TMED2Q15363 201 aa9.43□□□□□ -0.9
EXOSC1-211ENST00000489158 SCARA3Q6AZY7 606 aa9.43□□□□□ -0.9
EXOSC1-211ENST00000489158 TRAF7Q6Q0C0 670 aa9.43□□□□□ -0.9
EXOSC1-211ENST00000489158 LRRC8DQ7L1W4 858 aa9.43□□□□□ -0.9
EXOSC1-211ENST00000489158 MRPL10Q7Z7H8 261 aaKnown RBP9.43□□□□□ -0.9
EXOSC1-211ENST00000489158 FAM71AQ8IYT1 594 aa9.43□□□□□ -0.9
EXOSC1-211ENST00000489158 TTC39CQ8N584 583 aa9.43□□□□□ -0.9
EXOSC1-211ENST00000489158 C1orf127Q8N9H9 656 aa9.43□□□□□ -0.9
EXOSC1-211ENST00000489158 SMG8Q8ND04 991 aaKnown RBP9.43□□□□□ -0.9
EXOSC1-211ENST00000489158 TTC8Q8TAM2 541 aa9.43□□□□□ -0.9
EXOSC1-211ENST00000489158 STK32AQ8WU08 396 aa9.43□□□□□ -0.9
EXOSC1-211ENST00000489158 SLCO2A1Q92959 643 aa9.43□□□□□ -0.9
EXOSC1-211ENST00000489158 ZNF653Q96CK0 615 aa9.43□□□□□ -0.9
EXOSC1-211ENST00000489158 PGBD4Q96DM1 585 aa9.43□□□□□ -0.9
EXOSC1-211ENST00000489158 NUDCD1Q96RS6 583 aa9.43□□□□□ -0.9
EXOSC1-211ENST00000489158 FTHL17Q9BXU8 183 aa9.43□□□□□ -0.9
EXOSC1-211ENST00000489158 AGO3Q9H9G7 860 aaKnown RBP9.43□□□□□ -0.9
EXOSC1-211ENST00000489158 APOBEC3GQ9HC16 384 aaKnown RBP9.43□□□□□ -0.9
EXOSC1-211ENST00000489158 UBN1Q9NPG3 1134 aa9.43□□□□□ -0.9
EXOSC1-211ENST00000489158 NXF1Q9UBU9 619 aaKnown RBP9.43□□□□□ -0.9
EXOSC1-211ENST00000489158 PHTF1Q9UMS5 762 aa9.43□□□□□ -0.9
EXOSC1-211ENST00000489158 STARD13Q9Y3M8 1113 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms