RNA–Protein interactions for RNA: ENST00000489131.1

TOP3A-206, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-206ENST00000489131 RHOBTB2Q9BYZ6 727 aa13.46□□□□□ -0.25
TOP3A-206ENST00000489131 ZBP1Q9H171 429 aa13.46□□□□□ -0.25
TOP3A-206ENST00000489131 RXFP1Q9HBX9 757 aa13.46□□□□□ -0.25
TOP3A-206ENST00000489131 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.46□□□□□ -0.25
TOP3A-206ENST00000489131 TMEM51Q9NW97 253 aa13.46□□□□□ -0.25
TOP3A-206ENST00000489131 ZMYND8Q9ULU4 1186 aaPredicted RBP13.46□□□□□ -0.25
TOP3A-206ENST00000489131 SSX2IPQ9Y2D8 614 aa13.46□□□□□ -0.25
TOP3A-206ENST00000489131 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.46□□□□□ -0.25
TOP3A-206ENST00000489131 F8VP50 259 aa13.45□□□□□ -0.26
TOP3A-206ENST00000489131 KCNK3O14649 394 aa13.45□□□□□ -0.26
TOP3A-206ENST00000489131 LRCH4O75427 683 aa13.45□□□□□ -0.26
TOP3A-206ENST00000489131 ENDOD1O94919 500 aa13.45□□□□□ -0.26
TOP3A-206ENST00000489131 ZBED1O96006 694 aa13.45□□□□□ -0.26
TOP3A-206ENST00000489131 C1RP00736 705 aa13.45□□□□□ -0.26
TOP3A-206ENST00000489131 HAPLN1P10915 354 aaPredicted RBP13.45□□□□□ -0.26
TOP3A-206ENST00000489131 LCP1P13796 627 aa13.45□□□□□ -0.26
TOP3A-206ENST00000489131 PDGFRAP16234 1089 aa13.45□□□□□ -0.26
TOP3A-206ENST00000489131 CYP2F1P24903 491 aa13.45□□□□□ -0.26
TOP3A-206ENST00000489131 PSMA2P25787 234 aa13.45□□□□□ -0.26
TOP3A-206ENST00000489131 MATKP42679 507 aa13.45□□□□□ -0.26
TOP3A-206ENST00000489131 RWDD2BP57060 319 aa13.45□□□□□ -0.26
TOP3A-206ENST00000489131 TAS2R40P59535 323 aa13.45□□□□□ -0.26
TOP3A-206ENST00000489131 YWHAZP63104 245 aaKnown RBP13.45□□□□□ -0.26
TOP3A-206ENST00000489131 ROR1Q01973 937 aa13.45□□□□□ -0.26
TOP3A-206ENST00000489131 SLC25A11Q02978 314 aaKnown RBP13.45□□□□□ -0.26
TOP3A-206ENST00000489131 KRT17Q04695 432 aa13.45□□□□□ -0.26
TOP3A-206ENST00000489131 RAB33AQ14088 237 aa13.45□□□□□ -0.26
TOP3A-206ENST00000489131 CCDC14Q49A88 953 aa13.45□□□□□ -0.26
TOP3A-206ENST00000489131 SPOUT1Q5T280 376 aaKnown RBP13.45□□□□□ -0.26
TOP3A-206ENST00000489131 PRSS55Q6UWB4 352 aaPredicted RBP13.45□□□□□ -0.26
TOP3A-206ENST00000489131 STRADAQ7RTN6 431 aa13.45□□□□□ -0.26
TOP3A-206ENST00000489131 CPNE8Q86YQ8 564 aa13.45□□□□□ -0.26
TOP3A-206ENST00000489131 EMC1Q8N766 993 aa13.45□□□□□ -0.26
TOP3A-206ENST00000489131 CLEC4CQ8WTT0 213 aa13.45□□□□□ -0.26
TOP3A-206ENST00000489131 RXFP2Q8WXD0 754 aa13.45□□□□□ -0.26
TOP3A-206ENST00000489131 RIN2Q8WYP3 895 aaPredicted RBP13.45□□□□□ -0.26
TOP3A-206ENST00000489131 PGAP3Q96FM1 320 aaPredicted RBP13.45□□□□□ -0.26
TOP3A-206ENST00000489131 CLSTN3Q9BQT9 956 aa13.45□□□□□ -0.26
TOP3A-206ENST00000489131 ULBP1Q9BZM6 244 aa13.45□□□□□ -0.26
TOP3A-206ENST00000489131 RRN3Q9NYV6 651 aa13.45□□□□□ -0.26
TOP3A-206ENST00000489131 AFF4Q9UHB7 1163 aaKnown RBP13.45□□□□□ -0.26
TOP3A-206ENST00000489131 NR2E3Q9Y5X4 410 aa13.45□□□□□ -0.26
TOP3A-206ENST00000489131 IRAK3Q9Y616 596 aa13.45□□□□□ -0.26
TOP3A-206ENST00000489131 CDY1Q9Y6F8 540 aa13.45□□□□□ -0.26
TOP3A-206ENST00000489131 WDR27A2RRH5 827 aa13.44□□□□□ -0.26
TOP3A-206ENST00000489131 TMEM110-MUSTN1A8MSY1 372 aa13.44□□□□□ -0.26
TOP3A-206ENST00000489131 EFCAB8A8MWE9 144 aa13.44□□□□□ -0.26
TOP3A-206ENST00000489131 PDE2AO00408 941 aaPredicted RBP13.44□□□□□ -0.26
TOP3A-206ENST00000489131 ZNF185O15231 689 aa13.44□□□□□ -0.26
TOP3A-206ENST00000489131 TNRC18O15417 2968 aaPredicted RBP13.44□□□□□ -0.26
TOP3A-206ENST00000489131 TADA3O75528 432 aa13.44□□□□□ -0.26
TOP3A-206ENST00000489131 FGF18O76093 207 aa13.44□□□□□ -0.26
TOP3A-206ENST00000489131 URODP06132 367 aa13.44□□□□□ -0.26
TOP3A-206ENST00000489131 FYNP06241 537 aa13.44□□□□□ -0.26
TOP3A-206ENST00000489131 CTSAP10619 480 aa13.44□□□□□ -0.26
TOP3A-206ENST00000489131 CPB1P15086 417 aa13.44□□□□□ -0.26
TOP3A-206ENST00000489131 SDC4P31431 198 aa13.44□□□□□ -0.26
TOP3A-206ENST00000489131 CXCR5P32302 372 aa13.44□□□□□ -0.26
TOP3A-206ENST00000489131 NOS2P35228 1153 aa13.44□□□□□ -0.26
TOP3A-206ENST00000489131 PTPN7P35236 360 aa13.44□□□□□ -0.26
TOP3A-206ENST00000489131 MARCKSL1P49006 195 aa13.44□□□□□ -0.26
TOP3A-206ENST00000489131 RGS19P49795 217 aa13.44□□□□□ -0.26
TOP3A-206ENST00000489131 SLC5A3P53794 718 aa13.44□□□□□ -0.26
TOP3A-206ENST00000489131 COPS2P61201 443 aa13.44□□□□□ -0.26
TOP3A-206ENST00000489131 MLLT1Q03111 559 aaPredicted RBP13.44□□□□□ -0.26
TOP3A-206ENST00000489131 UBE3AQ05086 875 aa13.44□□□□□ -0.26
TOP3A-206ENST00000489131 TAF5Q15542 800 aa13.44□□□□□ -0.26
TOP3A-206ENST00000489131 SLC25A52Q3SY17 297 aa13.44□□□□□ -0.26
TOP3A-206ENST00000489131 KIAA1841Q6NSI8 718 aa13.44□□□□□ -0.26
TOP3A-206ENST00000489131 CC2D1AQ6P1N0 951 aaPredicted RBP13.44□□□□□ -0.26
TOP3A-206ENST00000489131 RNF19BQ6ZMZ0 732 aa13.44□□□□□ -0.26
TOP3A-206ENST00000489131 VSIG1Q86XK7 387 aa13.44□□□□□ -0.26
TOP3A-206ENST00000489131 EXD1Q8NHP7 514 aa13.44□□□□□ -0.26
TOP3A-206ENST00000489131 ZNF461Q8TAF7 563 aa13.44□□□□□ -0.26
TOP3A-206ENST00000489131 TBCBQ99426 244 aa13.44□□□□□ -0.26
TOP3A-206ENST00000489131 NPY6RQ99463 290 aa13.44□□□□□ -0.26
TOP3A-206ENST00000489131 ZBED2Q9BTP6 218 aa13.44□□□□□ -0.26
TOP3A-206ENST00000489131 CARD6Q9BX69 1037 aa13.44□□□□□ -0.26
TOP3A-206ENST00000489131 POPDC2Q9HBU9 364 aa13.44□□□□□ -0.26
TOP3A-206ENST00000489131 DDX56Q9NY93 547 aaKnown RBP13.44□□□□□ -0.26
TOP3A-206ENST00000489131 ABI2Q9NYB9 513 aaPredicted RBP13.44□□□□□ -0.26
TOP3A-206ENST00000489131 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.44□□□□□ -0.26
TOP3A-206ENST00000489131 SCML2Q9UQR0 700 aa13.44□□□□□ -0.26
TOP3A-206ENST00000489131 GREB1Q4ZG55 1949 aa13.43□□□□□ -0.26
TOP3A-206ENST00000489131 ZNF487B1APH4 448 aa13.43□□□□□ -0.26
TOP3A-206ENST00000489131 PGRMC1O00264 195 aaKnown RBP13.43□□□□□ -0.26
TOP3A-206ENST00000489131 PIK3R2O00459 728 aa13.43□□□□□ -0.26
TOP3A-206ENST00000489131 ADAM12O43184 909 aa13.43□□□□□ -0.26
TOP3A-206ENST00000489131 TLL1O43897 1013 aa13.43□□□□□ -0.26
TOP3A-206ENST00000489131 RNF8O76064 485 aa13.43□□□□□ -0.26
TOP3A-206ENST00000489131 KRT7P08729 469 aa13.43□□□□□ -0.26
TOP3A-206ENST00000489131 ATF2P15336 505 aa13.43□□□□□ -0.26
TOP3A-206ENST00000489131 DESP17661 470 aa13.43□□□□□ -0.26
TOP3A-206ENST00000489131 BMPR1AP36894 532 aa13.43□□□□□ -0.26
TOP3A-206ENST00000489131 GRIK1P39086 918 aa13.43□□□□□ -0.26
TOP3A-206ENST00000489131 PAFAH1B1P43034 410 aa13.43□□□□□ -0.26
TOP3A-206ENST00000489131 TUFMP49411 452 aaKnown RBP13.43□□□□□ -0.26
TOP3A-206ENST00000489131 NDUFV1P49821 464 aa13.43□□□□□ -0.26
TOP3A-206ENST00000489131 RPL10AP62906 217 aaKnown RBP13.43□□□□□ -0.26
TOP3A-206ENST00000489131 TAZQ16635 292 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms