RNA–Protein interactions for RNA: ENST00000489130.2

SRRM1-216, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-216ENST00000489130 CCDC150Q8NCX0 1101 aa13.3□□□□□ -0.28
SRRM1-216ENST00000489130 WHAMMQ8TF30 809 aa13.3□□□□□ -0.28
SRRM1-216ENST00000489130 CD101Q93033 1021 aa13.3□□□□□ -0.28
SRRM1-216ENST00000489130 SMARCE1Q969G3 411 aa13.3□□□□□ -0.28
SRRM1-216ENST00000489130 EEF2KMTQ96G04 330 aa13.3□□□□□ -0.28
SRRM1-216ENST00000489130 HNRNPABQ99729 332 aaKnown RBP13.3□□□□□ -0.28
SRRM1-216ENST00000489130 NT5C1AQ9BXI3 368 aa13.3□□□□□ -0.28
SRRM1-216ENST00000489130 GTPBP4Q9BZE4 634 aaKnown RBP13.3□□□□□ -0.28
SRRM1-216ENST00000489130 MMRN2Q9H8L6 949 aa13.3□□□□□ -0.28
SRRM1-216ENST00000489130 FAM49BQ9NUQ9 324 aa13.3□□□□□ -0.28
SRRM1-216ENST00000489130 SMPD4Q9NXE4 827 aa13.3□□□□□ -0.28
SRRM1-216ENST00000489130 PCDHA5Q9Y5H7 936 aa13.3□□□□□ -0.28
SRRM1-216ENST00000489130 DCHS1Q96JQ0 3298 aa13.3□□□□□ -0.28
SRRM1-216ENST00000489130 SLC9A3R1O14745 358 aaPredicted RBP13.29□□□□□ -0.28
SRRM1-216ENST00000489130 SLC16A3O15427 465 aaKnown RBP13.29□□□□□ -0.28
SRRM1-216ENST00000489130 COCHO43405 550 aa13.29□□□□□ -0.28
SRRM1-216ENST00000489130 ATG13O75143 517 aa13.29□□□□□ -0.28
SRRM1-216ENST00000489130 RNF40O75150 1001 aa13.29□□□□□ -0.28
SRRM1-216ENST00000489130 FAM200BP0CF97 657 aa13.29□□□□□ -0.28
SRRM1-216ENST00000489130 MBL2P11226 248 aaPredicted RBP13.29□□□□□ -0.28
SRRM1-216ENST00000489130 CNR2P34972 360 aa13.29□□□□□ -0.28
SRRM1-216ENST00000489130 FNTBP49356 437 aa13.29□□□□□ -0.28
SRRM1-216ENST00000489130 PMS1P54277 932 aaKnown RBP13.29□□□□□ -0.28
SRRM1-216ENST00000489130 MAP3K7CLP57077 242 aa13.29□□□□□ -0.28
SRRM1-216ENST00000489130 LRRC63Q05C16 580 aa13.29□□□□□ -0.28
SRRM1-216ENST00000489130 GAB4Q2WGN9 574 aa13.29□□□□□ -0.28
SRRM1-216ENST00000489130 HECTD3Q5T447 861 aa13.29□□□□□ -0.28
SRRM1-216ENST00000489130 CLEC20AQ6ZU45 233 aa13.29□□□□□ -0.28
SRRM1-216ENST00000489130 FILIP1Q7Z7B0 1213 aa13.29□□□□□ -0.28
SRRM1-216ENST00000489130 DDX42Q86XP3 938 aaKnown RBP eCLIP13.29□□□□□ -0.28
SRRM1-216ENST00000489130 KIAA2013Q8IYS2 634 aa13.29□□□□□ -0.28
SRRM1-216ENST00000489130 FBXL13Q8NEE6 735 aa13.29□□□□□ -0.28
SRRM1-216ENST00000489130 EZH1Q92800 747 aaPredicted RBP13.29□□□□□ -0.28
SRRM1-216ENST00000489130 SEMA4DQ92854 862 aa13.29□□□□□ -0.28
SRRM1-216ENST00000489130 ERCC4Q92889 916 aaPredicted RBP13.29□□□□□ -0.28
SRRM1-216ENST00000489130 SECISBP2LQ93073 1101 aaKnown RBP13.29□□□□□ -0.28
SRRM1-216ENST00000489130 ZFRQ96KR1 1074 aaKnown RBP13.29□□□□□ -0.28
SRRM1-216ENST00000489130 TSG101Q99816 390 aa13.29□□□□□ -0.28
SRRM1-216ENST00000489130 FBXO44Q9H4M3 255 aa13.29□□□□□ -0.28
SRRM1-216ENST00000489130 PNPLA8Q9NP80 782 aa13.29□□□□□ -0.28
SRRM1-216ENST00000489130 GMIPQ9P107 970 aa13.29□□□□□ -0.28
SRRM1-216ENST00000489130 CFAP97Q9P2B7 532 aa13.29□□□□□ -0.28
SRRM1-216ENST00000489130 NCDNQ9UBB6 729 aa13.29□□□□□ -0.28
SRRM1-216ENST00000489130 CHORDC1Q9UHD1 332 aaPredicted RBP13.29□□□□□ -0.28
SRRM1-216ENST00000489130 HOOK1Q9UJC3 728 aaKnown RBP13.29□□□□□ -0.28
SRRM1-216ENST00000489130 DNAH14Q0VDD8 3507 aa13.29□□□□□ -0.28
SRRM1-216ENST00000489130 FRYLO94915 3013 aa13.29□□□□□ -0.28
SRRM1-216ENST00000489130 ZNF292O60281 2723 aa13.28□□□□□ -0.28
SRRM1-216ENST00000489130 GPR179Q6PRD1 2367 aa13.28□□□□□ -0.28
SRRM1-216ENST00000489130 CCDC163A0A0D9SF12 145 aa13.28□□□□□ -0.28
SRRM1-216ENST00000489130 HHLA1C9JL84 531 aa13.28□□□□□ -0.28
SRRM1-216ENST00000489130 STX10O60499 249 aa13.28□□□□□ -0.28
SRRM1-216ENST00000489130 CYP17A1P05093 508 aa13.28□□□□□ -0.28
SRRM1-216ENST00000489130 CD58P19256 250 aa13.28□□□□□ -0.28
SRRM1-216ENST00000489130 FKBP3Q00688 224 aaKnown RBP13.28□□□□□ -0.28
SRRM1-216ENST00000489130 ANKRD40Q6AI12 368 aa13.28□□□□□ -0.28
SRRM1-216ENST00000489130 WDR5BQ86VZ2 330 aa13.28□□□□□ -0.28
SRRM1-216ENST00000489130 ADGRG2Q8IZP9 1017 aa13.28□□□□□ -0.28
SRRM1-216ENST00000489130 CYFIP2Q96F07 1278 aa13.28□□□□□ -0.28
SRRM1-216ENST00000489130 DUSP9Q99956 384 aaKnown RBP13.28□□□□□ -0.28
SRRM1-216ENST00000489130 FAM124BQ9H5Z6 455 aaPredicted RBP13.28□□□□□ -0.28
SRRM1-216ENST00000489130 RAB20Q9NX57 234 aa13.28□□□□□ -0.28
SRRM1-216ENST00000489130 EP300Q09472 2414 aaPredicted RBP13.28□□□□□ -0.28
SRRM1-216ENST00000489130 E2F8A0AVK6 867 aa13.27□□□□□ -0.29
SRRM1-216ENST00000489130 TRIM49BA6NDI0 452 aa13.27□□□□□ -0.29
SRRM1-216ENST00000489130 HRO43593 1189 aa13.27□□□□□ -0.29
SRRM1-216ENST00000489130 ADORA2BP29275 332 aa13.27□□□□□ -0.29
SRRM1-216ENST00000489130 HOXC13P31276 330 aa13.27□□□□□ -0.29
SRRM1-216ENST00000489130 OPRD1P41143 372 aa13.27□□□□□ -0.29
SRRM1-216ENST00000489130 ID4P47928 161 aa13.27□□□□□ -0.29
SRRM1-216ENST00000489130 PGFP49763 221 aa13.27□□□□□ -0.29
SRRM1-216ENST00000489130 SIM2Q14190 667 aaPredicted RBP13.27□□□□□ -0.29
SRRM1-216ENST00000489130 DHCR24Q15392 516 aa13.27□□□□□ -0.29
SRRM1-216ENST00000489130 CBWD6Q4V339 395 aa13.27□□□□□ -0.29
SRRM1-216ENST00000489130 CBWD3Q5JTY5 395 aa13.27□□□□□ -0.29
SRRM1-216ENST00000489130 CBWD5Q5RIA9 395 aa13.27□□□□□ -0.29
SRRM1-216ENST00000489130 HEATR6Q6AI08 1181 aaKnown RBP13.27□□□□□ -0.29
SRRM1-216ENST00000489130 LAIR1Q6GTX8 287 aa13.27□□□□□ -0.29
SRRM1-216ENST00000489130 GPRIN1Q7Z2K8 1008 aa13.27□□□□□ -0.29
SRRM1-216ENST00000489130 TTC39CQ8N584 583 aa13.27□□□□□ -0.29
SRRM1-216ENST00000489130 GPR161Q8N6U8 529 aaKnown RBP13.27□□□□□ -0.29
SRRM1-216ENST00000489130 OTUB2Q96DC9 234 aa13.27□□□□□ -0.29
SRRM1-216ENST00000489130 DNAI2Q9GZS0 605 aa13.27□□□□□ -0.29
SRRM1-216ENST00000489130 CCSER2Q9H7U1 834 aa13.27□□□□□ -0.29
SRRM1-216ENST00000489130 CYLDQ9NQC7 956 aa13.27□□□□□ -0.29
SRRM1-216ENST00000489130 TLR8Q9NR97 1041 aaKnown RBP13.27□□□□□ -0.29
SRRM1-216ENST00000489130 TBC1D14Q9P2M4 693 aa13.27□□□□□ -0.29
SRRM1-216ENST00000489130 GMEB2Q9UKD1 530 aa13.27□□□□□ -0.29
SRRM1-216ENST00000489130 RAB23Q9ULC3 237 aa13.27□□□□□ -0.29
SRRM1-216ENST00000489130 SCML2Q9UQR0 700 aa13.27□□□□□ -0.29
SRRM1-216ENST00000489130 COQ4Q9Y3A0 265 aa13.27□□□□□ -0.29
SRRM1-216ENST00000489130 SCAMP3O14828 347 aaKnown RBP13.26□□□□□ -0.29
SRRM1-216ENST00000489130 TLR5O60602 858 aa13.26□□□□□ -0.29
SRRM1-216ENST00000489130 TGM1P22735 817 aa13.26□□□□□ -0.29
SRRM1-216ENST00000489130 EIF2DP41214 584 aaKnown RBP13.26□□□□□ -0.29
SRRM1-216ENST00000489130 SRSF5Q13243 272 aaKnown RBP13.26□□□□□ -0.29
SRRM1-216ENST00000489130 DCAF17Q5H9S7 520 aaPredicted RBP13.26□□□□□ -0.29
SRRM1-216ENST00000489130 TCERG1LQ5VWI1 586 aa13.26□□□□□ -0.29
SRRM1-216ENST00000489130 RHBDF2Q6PJF5 856 aa13.26□□□□□ -0.29
SRRM1-216ENST00000489130 PRR23BQ6ZRT6 265 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms