RNA–Protein interactions for RNA: ENST00000488961.5

BEST3-205, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-205ENST00000488961 RBM15Q96T37 977 aaKnown RBP eCLIP7.98□□□□□ -1.13
BEST3-205ENST00000488961 NAP1L3Q99457 506 aaPredicted RBP7.98□□□□□ -1.13
BEST3-205ENST00000488961 NTPCRQ9BSD7 190 aaKnown RBP7.98□□□□□ -1.13
BEST3-205ENST00000488961 TIPINQ9BVW5 301 aa7.98□□□□□ -1.13
BEST3-205ENST00000488961 SLCO1B3Q9NPD5 702 aa7.98□□□□□ -1.13
BEST3-205ENST00000488961 NINJ2Q9NZG7 142 aa7.98□□□□□ -1.13
BEST3-205ENST00000488961 IL1RAPL1Q9NZN1 696 aa7.98□□□□□ -1.13
BEST3-205ENST00000488961 COQ4Q9Y3A0 265 aa7.98□□□□□ -1.13
BEST3-205ENST00000488961 A0A1W2PPM1 405 aa7.97□□□□□ -1.13
BEST3-205ENST00000488961 A6NJR5 290 aa7.97□□□□□ -1.13
BEST3-205ENST00000488961 MIF4GDA9UHW6 222 aaKnown RBP7.97□□□□□ -1.13
BEST3-205ENST00000488961 M0QYV0 167 aa7.97□□□□□ -1.13
BEST3-205ENST00000488961 ASAP2O43150 1006 aa7.97□□□□□ -1.13
BEST3-205ENST00000488961 PROSCO94903 275 aa7.97□□□□□ -1.13
BEST3-205ENST00000488961 ASLP04424 464 aa7.97□□□□□ -1.13
BEST3-205ENST00000488961 GARTP22102 1010 aa7.97□□□□□ -1.13
BEST3-205ENST00000488961 BNIP1Q12981 228 aa7.97□□□□□ -1.13
BEST3-205ENST00000488961 MSS51Q4VC12 460 aa7.97□□□□□ -1.13
BEST3-205ENST00000488961 PPP6R3Q5H9R7 873 aaPredicted RBP7.97□□□□□ -1.13
BEST3-205ENST00000488961 ATF7IP2Q5U623 682 aa7.97□□□□□ -1.13
BEST3-205ENST00000488961 C15orf39Q6ZRI6 1047 aa7.97□□□□□ -1.13
BEST3-205ENST00000488961 APOBEC3FQ8IUX4 373 aaKnown RBP7.97□□□□□ -1.13
BEST3-205ENST00000488961 C12orf56Q8IXR9 622 aa7.97□□□□□ -1.13
BEST3-205ENST00000488961 ARFGAP1Q8N6T3 406 aa7.97□□□□□ -1.13
BEST3-205ENST00000488961 SEPT1Q8WYJ6 367 aa7.97□□□□□ -1.13
BEST3-205ENST00000488961 MMP19Q99542 508 aa7.97□□□□□ -1.13
BEST3-205ENST00000488961 GPR20Q99678 358 aa7.97□□□□□ -1.13
BEST3-205ENST00000488961 ACO2Q99798 780 aaKnown RBP7.97□□□□□ -1.13
BEST3-205ENST00000488961 LOXHD1Q8IVV2 1947 aa7.97□□□□□ -1.13
BEST3-205ENST00000488961 COL2A1P02458 1487 aaPredicted RBP7.97□□□□□ -1.13
BEST3-205ENST00000488961 HTR3EA5X5Y0 456 aa7.97□□□□□ -1.13
BEST3-205ENST00000488961 C2orf71A6NGG8 1288 aa7.97□□□□□ -1.13
BEST3-205ENST00000488961 NVLO15381 856 aaKnown RBP7.97□□□□□ -1.13
BEST3-205ENST00000488961 CNMDO75829 334 aa7.97□□□□□ -1.13
BEST3-205ENST00000488961 FAM155BO75949 473 aa7.97□□□□□ -1.13
BEST3-205ENST00000488961 TJP3O95049 919 aa7.97□□□□□ -1.13
BEST3-205ENST00000488961 ERBB2P04626 1255 aa7.97□□□□□ -1.13
BEST3-205ENST00000488961 YBX3P16989 372 aaKnown RBP eCLIP7.97□□□□□ -1.13
BEST3-205ENST00000488961 NAMPTP43490 491 aa7.97□□□□□ -1.13
BEST3-205ENST00000488961 PSMD7P51665 324 aa7.97□□□□□ -1.13
BEST3-205ENST00000488961 BASP1P80723 227 aaKnown RBP7.97□□□□□ -1.13
BEST3-205ENST00000488961 HPCAP84074 193 aa7.97□□□□□ -1.13
BEST3-205ENST00000488961 NFX1Q12986 1120 aaKnown RBP7.97□□□□□ -1.13
BEST3-205ENST00000488961 ITGA7Q13683 1181 aa7.97□□□□□ -1.13
BEST3-205ENST00000488961 ALCAMQ13740 583 aa7.97□□□□□ -1.13
BEST3-205ENST00000488961 KCTD2Q14681 263 aa7.97□□□□□ -1.13
BEST3-205ENST00000488961 EML3Q32P44 896 aa7.97□□□□□ -1.13
BEST3-205ENST00000488961 GALNTL6Q49A17 601 aa7.97□□□□□ -1.13
BEST3-205ENST00000488961 ZNF618Q5T7W0 954 aa7.97□□□□□ -1.13
BEST3-205ENST00000488961 BSPRYQ5W0U4 402 aa7.97□□□□□ -1.13
BEST3-205ENST00000488961 LRIG3Q6UXM1 1119 aa7.97□□□□□ -1.13
BEST3-205ENST00000488961 ASRGL1Q7L266 308 aa7.97□□□□□ -1.13
BEST3-205ENST00000488961 CCDC125Q86Z20 511 aa7.97□□□□□ -1.13
BEST3-205ENST00000488961 MAP7D3Q8IWC1 876 aa7.97□□□□□ -1.13
BEST3-205ENST00000488961 FAM71DQ8N9W8 422 aa7.97□□□□□ -1.13
BEST3-205ENST00000488961 FEZF2Q8TBJ5 459 aa7.97□□□□□ -1.13
BEST3-205ENST00000488961 TMC2Q8TDI7 906 aa7.97□□□□□ -1.13
BEST3-205ENST00000488961 KHSRPQ92945 711 aaKnown RBP eCLIP7.97□□□□□ -1.13
BEST3-205ENST00000488961 ART4Q93070 314 aa7.97□□□□□ -1.13
BEST3-205ENST00000488961 C18orf25Q96B23 403 aaPredicted RBP7.97□□□□□ -1.13
BEST3-205ENST00000488961 ZNF333Q96JL9 665 aa7.97□□□□□ -1.13
BEST3-205ENST00000488961 CFAP57Q96MR6 1250 aa7.97□□□□□ -1.13
BEST3-205ENST00000488961 CGRRF1Q99675 332 aa7.97□□□□□ -1.13
BEST3-205ENST00000488961 TXLNGYQ9BZA5 131 aa7.97□□□□□ -1.13
BEST3-205ENST00000488961 NRBP2Q9NSY0 501 aa7.97□□□□□ -1.13
BEST3-205ENST00000488961 SETD4Q9NVD3 440 aa7.97□□□□□ -1.13
BEST3-205ENST00000488961 ZNF112Q9UJU3 913 aa7.97□□□□□ -1.13
BEST3-205ENST00000488961 MFHAS1Q9Y4C4 1052 aa7.97□□□□□ -1.13
BEST3-205ENST00000488961 ADCY6O43306 1168 aa7.96□□□□□ -1.13
BEST3-205ENST00000488961 CST8O60676 142 aa7.96□□□□□ -1.13
BEST3-205ENST00000488961 WFS1O76024 890 aa7.96□□□□□ -1.13
BEST3-205ENST00000488961 HOXC6P09630 235 aa7.96□□□□□ -1.13
BEST3-205ENST00000488961 BRAFP15056 766 aa7.96□□□□□ -1.13
BEST3-205ENST00000488961 MUTP22033 750 aa7.96□□□□□ -1.13
BEST3-205ENST00000488961 IVDP26440 423 aa7.96□□□□□ -1.13
BEST3-205ENST00000488961 RTP1P59025 263 aa7.96□□□□□ -1.13
BEST3-205ENST00000488961 GCNT1Q02742 428 aa7.96□□□□□ -1.13
BEST3-205ENST00000488961 OVGP1Q12889 678 aa7.96□□□□□ -1.13
BEST3-205ENST00000488961 IRF5Q13568 498 aa7.96□□□□□ -1.13
BEST3-205ENST00000488961 DHX34Q14147 1143 aaKnown RBP7.96□□□□□ -1.13
BEST3-205ENST00000488961 LIN9Q5TKA1 542 aa7.96□□□□□ -1.13
BEST3-205ENST00000488961 ACOT1Q86TX2 421 aa7.96□□□□□ -1.13
BEST3-205ENST00000488961 UNC45BQ8IWX7 931 aa7.96□□□□□ -1.13
BEST3-205ENST00000488961 SCUBE3Q8IX30 993 aa7.96□□□□□ -1.13
BEST3-205ENST00000488961 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.96□□□□□ -1.13
BEST3-205ENST00000488961 C1orf127Q8N9H9 656 aa7.96□□□□□ -1.13
BEST3-205ENST00000488961 NCSTNQ92542 709 aa7.96□□□□□ -1.13
BEST3-205ENST00000488961 TUT1Q9H6E5 874 aaKnown RBP7.96□□□□□ -1.13
BEST3-205ENST00000488961 ETNK1Q9HBU6 452 aa7.96□□□□□ -1.13
BEST3-205ENST00000488961 SLC17A6Q9P2U8 582 aa7.96□□□□□ -1.13
BEST3-205ENST00000488961 PCYOX1Q9UHG3 505 aa7.96□□□□□ -1.13
BEST3-205ENST00000488961 SIX4Q9UIU6 781 aa7.96□□□□□ -1.13
BEST3-205ENST00000488961 N6AMT1Q9Y5N5 214 aa7.96□□□□□ -1.13
BEST3-205ENST00000488961 BRCA1P38398 1863 aaKnown RBP7.96□□□□□ -1.13
BEST3-205ENST00000488961 CCDC78A2IDD5 438 aa7.96□□□□□ -1.14
BEST3-205ENST00000488961 C19orf81C9J6K1 198 aa7.96□□□□□ -1.14
BEST3-205ENST00000488961 ATP9BO43861 1147 aa7.96□□□□□ -1.14
BEST3-205ENST00000488961 TOP3BO95985 862 aaKnown RBP7.96□□□□□ -1.14
BEST3-205ENST00000488961 STAG3L1P0CL83 205 aa7.96□□□□□ -1.14
BEST3-205ENST00000488961 NAT2P11245 290 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms