RNA–Protein interactions for RNA: ENST00000488896.1

PTPN4-212, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 575 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-212ENST00000488896 SLC18B1Q6NT16 456 aa5.81□□□□□ -1.48
PTPN4-212ENST00000488896 SLC2A7Q6PXP3 512 aa5.81□□□□□ -1.48
PTPN4-212ENST00000488896 SRGAP1Q7Z6B7 1085 aa5.81□□□□□ -1.48
PTPN4-212ENST00000488896 SESTD1Q86VW0 696 aa5.81□□□□□ -1.48
PTPN4-212ENST00000488896 APIPQ96GX9 242 aa5.81□□□□□ -1.48
PTPN4-212ENST00000488896 SNX18Q96RF0 628 aa5.81□□□□□ -1.48
PTPN4-212ENST00000488896 APOL5Q9BWW9 433 aa5.81□□□□□ -1.48
PTPN4-212ENST00000488896 TRIM5Q9C035 493 aa5.81□□□□□ -1.48
PTPN4-212ENST00000488896 KLHL42Q9P2K6 505 aa5.81□□□□□ -1.48
PTPN4-212ENST00000488896 INO80B-WBP1J3KQ70 363 aa5.8□□□□□ -1.48
PTPN4-212ENST00000488896 ZBED1O96006 694 aa5.8□□□□□ -1.48
PTPN4-212ENST00000488896 YY1P25490 414 aa5.8□□□□□ -1.48
PTPN4-212ENST00000488896 EPHA3P29320 983 aa5.8□□□□□ -1.48
PTPN4-212ENST00000488896 COPB1P53618 953 aaKnown RBP5.8□□□□□ -1.48
PTPN4-212ENST00000488896 KRTAP1-1Q07627 177 aa5.8□□□□□ -1.48
PTPN4-212ENST00000488896 CERKLQ49MI3 558 aaPredicted RBP5.8□□□□□ -1.48
PTPN4-212ENST00000488896 MTHFD1LQ6UB35 978 aa5.8□□□□□ -1.48
PTPN4-212ENST00000488896 CATSPERGQ6ZRH7 1159 aa5.8□□□□□ -1.48
PTPN4-212ENST00000488896 UNC13DQ70J99 1090 aa5.8□□□□□ -1.48
PTPN4-212ENST00000488896 NEK8Q86SG6 692 aa5.8□□□□□ -1.48
PTPN4-212ENST00000488896 TTC8Q8TAM2 541 aa5.8□□□□□ -1.48
PTPN4-212ENST00000488896 INO80BQ9C086 356 aaPredicted RBP5.8□□□□□ -1.48
PTPN4-212ENST00000488896 CHST8Q9H2A9 424 aa5.8□□□□□ -1.48
PTPN4-212ENST00000488896 OBP2AQ9NY56 170 aa5.8□□□□□ -1.48
PTPN4-212ENST00000488896 ZNF70Q9UC06 446 aaPredicted RBP5.8□□□□□ -1.48
PTPN4-212ENST00000488896 ZNF804BA4D1E1 1349 aa5.79□□□□□ -1.48
PTPN4-212ENST00000488896 KCNU1A8MYU2 1149 aa5.79□□□□□ -1.48
PTPN4-212ENST00000488896 POC1B-GALNT4F8VUJ3 575 aa5.79□□□□□ -1.48
PTPN4-212ENST00000488896 H7C1Q1 480 aa5.79□□□□□ -1.48
PTPN4-212ENST00000488896 CD3EAPO15446 510 aaKnown RBP5.79□□□□□ -1.48
PTPN4-212ENST00000488896 CCP110O43303 1012 aa5.79□□□□□ -1.48
PTPN4-212ENST00000488896 GCATO75600 419 aa5.79□□□□□ -1.48
PTPN4-212ENST00000488896 FGAP02671 866 aa5.79□□□□□ -1.48
PTPN4-212ENST00000488896 TUBB4AP04350 444 aa5.79□□□□□ -1.48
PTPN4-212ENST00000488896 MYCLP12524 364 aaPredicted RBP5.79□□□□□ -1.48
PTPN4-212ENST00000488896 IL1R1P14778 569 aa5.79□□□□□ -1.48
PTPN4-212ENST00000488896 CREB1P16220 341 aa5.79□□□□□ -1.48
PTPN4-212ENST00000488896 TPH1P17752 444 aa5.79□□□□□ -1.48
PTPN4-212ENST00000488896 ACVR2AP27037 513 aa5.79□□□□□ -1.48
PTPN4-212ENST00000488896 CPT1AP50416 773 aa5.79□□□□□ -1.48
PTPN4-212ENST00000488896 PGDP52209 483 aa5.79□□□□□ -1.48
PTPN4-212ENST00000488896 FAM193AP78312 1265 aa5.79□□□□□ -1.48
PTPN4-212ENST00000488896 GBX1Q14549 363 aa5.79□□□□□ -1.48
PTPN4-212ENST00000488896 KCNAB1Q14722 419 aa5.79□□□□□ -1.48
PTPN4-212ENST00000488896 NPY5RQ15761 445 aa5.79□□□□□ -1.48
PTPN4-212ENST00000488896 MIS18BP1Q6P0N0 1132 aa5.79□□□□□ -1.48
PTPN4-212ENST00000488896 CHST15Q7LFX5 561 aaPredicted RBP5.79□□□□□ -1.48
PTPN4-212ENST00000488896 FMNL3Q8IVF7 1028 aa5.79□□□□□ -1.48
PTPN4-212ENST00000488896 YAF2Q8IY57 180 aa5.79□□□□□ -1.48
PTPN4-212ENST00000488896 GALNT4Q8N4A0 578 aa5.79□□□□□ -1.48
PTPN4-212ENST00000488896 C11orf44Q8N8P7 122 aa5.79□□□□□ -1.48
PTPN4-212ENST00000488896 TIFAQ96CG3 184 aa5.79□□□□□ -1.48
PTPN4-212ENST00000488896 RSPRY1Q96DX4 576 aa5.79□□□□□ -1.48
PTPN4-212ENST00000488896 VN1R3Q9BXE9 311 aa5.79□□□□□ -1.48
PTPN4-212ENST00000488896 SEMA4CQ9C0C4 833 aa5.79□□□□□ -1.48
PTPN4-212ENST00000488896 TBC1D23Q9NUY8 699 aa5.79□□□□□ -1.48
PTPN4-212ENST00000488896 FER1L4A9Z1Z3 1794 aa5.78□□□□□ -1.48
PTPN4-212ENST00000488896 SMIM35A0A1B0GVV1 85 aa5.78□□□□□ -1.48
PTPN4-212ENST00000488896 UBE2Q2LH0YL09 131 aa5.78□□□□□ -1.48
PTPN4-212ENST00000488896 AGPSO00116 658 aa5.78□□□□□ -1.48
PTPN4-212ENST00000488896 EXOC5O00471 708 aa5.78□□□□□ -1.48
PTPN4-212ENST00000488896 TXNP10599 105 aaKnown RBP5.78□□□□□ -1.48
PTPN4-212ENST00000488896 NTSR1P30989 418 aa5.78□□□□□ -1.48
PTPN4-212ENST00000488896 CARSP49589 748 aaKnown RBP5.78□□□□□ -1.48
PTPN4-212ENST00000488896 KLF9Q13886 244 aaPredicted RBP5.78□□□□□ -1.48
PTPN4-212ENST00000488896 ETFDHQ16134 617 aa5.78□□□□□ -1.48
PTPN4-212ENST00000488896 ZNF750Q32MQ0 723 aa5.78□□□□□ -1.48
PTPN4-212ENST00000488896 PAPD7Q5XG87 772 aaKnown RBP5.78□□□□□ -1.48
PTPN4-212ENST00000488896 PTCHD4Q6ZW05 846 aa5.78□□□□□ -1.48
PTPN4-212ENST00000488896 BCDIN3DQ7Z5W3 292 aaKnown RBP5.78□□□□□ -1.48
PTPN4-212ENST00000488896 RAB11FIP4Q86YS3 637 aa5.78□□□□□ -1.48
PTPN4-212ENST00000488896 C8orf58Q8NAV2 365 aa5.78□□□□□ -1.48
PTPN4-212ENST00000488896 SMCR8Q8TEV9 937 aaPredicted RBP5.78□□□□□ -1.48
PTPN4-212ENST00000488896 CCDC17Q96LX7 622 aa5.78□□□□□ -1.48
PTPN4-212ENST00000488896 KLHL13Q9P2N7 655 aa5.78□□□□□ -1.48
PTPN4-212ENST00000488896 SNX13Q9Y5W8 968 aa5.78□□□□□ -1.48
PTPN4-212ENST00000488896 TCRBV5S1A1TA0A578 114 aa5.77□□□□□ -1.49
PTPN4-212ENST00000488896 PPM1GO15355 546 aaPredicted RBP5.77□□□□□ -1.49
PTPN4-212ENST00000488896 SPRY2O43597 315 aa5.77□□□□□ -1.49
PTPN4-212ENST00000488896 CYP2A6P11509 494 aaPredicted RBP5.77□□□□□ -1.49
PTPN4-212ENST00000488896 RHCEP18577 417 aa5.77□□□□□ -1.49
PTPN4-212ENST00000488896 DIO1P49895 249 aa5.77□□□□□ -1.49
PTPN4-212ENST00000488896 GATMP50440 423 aa5.77□□□□□ -1.49
PTPN4-212ENST00000488896 TIRAPP58753 221 aa5.77□□□□□ -1.49
PTPN4-212ENST00000488896 RHDQ02161 417 aa5.77□□□□□ -1.49
PTPN4-212ENST00000488896 LMAN2Q12907 356 aa5.77□□□□□ -1.49
PTPN4-212ENST00000488896 HNRNPA0Q13151 305 aaKnown RBP5.77□□□□□ -1.49
PTPN4-212ENST00000488896 GALEQ14376 348 aa5.77□□□□□ -1.49
PTPN4-212ENST00000488896 FAM187BQ17R55 369 aa5.77□□□□□ -1.49
PTPN4-212ENST00000488896 AWAT1Q58HT5 328 aa5.77□□□□□ -1.49
PTPN4-212ENST00000488896 SFTPA1Q8IWL2 248 aa5.77□□□□□ -1.49
PTPN4-212ENST00000488896 PRDM11Q9NQV5 511 aa5.77□□□□□ -1.49
PTPN4-212ENST00000488896 ASIC5Q9NY37 505 aa5.77□□□□□ -1.49
PTPN4-212ENST00000488896 MGAT4CQ9UBM8 478 aa5.77□□□□□ -1.49
PTPN4-212ENST00000488896 WDR17Q8IZU2 1322 aa5.76□□□□□ -1.49
PTPN4-212ENST00000488896 USP1O94782 785 aa5.76□□□□□ -1.49
PTPN4-212ENST00000488896 HRGP04196 525 aa5.76□□□□□ -1.49
PTPN4-212ENST00000488896 PARP1P09874 1014 aaKnown RBP5.76□□□□□ -1.49
PTPN4-212ENST00000488896 BTF3P20290 206 aaKnown RBP5.76□□□□□ -1.49
PTPN4-212ENST00000488896 SEMA5AQ13591 1074 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms