RNA–Protein interactions for RNA: ENST00000488864.5

CHD1L-208, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-208ENST00000488864 TNFAIP3P21580 790 aa13.95□□□□□ -0.18
CHD1L-208ENST00000488864 TBXAS1P24557 533 aaPredicted RBP13.95□□□□□ -0.18
CHD1L-208ENST00000488864 ATICP31939 592 aa13.95□□□□□ -0.18
CHD1L-208ENST00000488864 PDE6CP51160 858 aa13.95□□□□□ -0.18
CHD1L-208ENST00000488864 LILRA4P59901 499 aa13.95□□□□□ -0.18
CHD1L-208ENST00000488864 DEFB103AP81534 67 aa13.95□□□□□ -0.18
CHD1L-208ENST00000488864 BNIP1Q12981 228 aa13.95□□□□□ -0.18
CHD1L-208ENST00000488864 GRIK3Q13003 919 aa13.95□□□□□ -0.18
CHD1L-208ENST00000488864 LONRF1Q17RB8 773 aa13.95□□□□□ -0.18
CHD1L-208ENST00000488864 C16orf59Q7L2K0 433 aa13.95□□□□□ -0.18
CHD1L-208ENST00000488864 FAM71AQ8IYT1 594 aa13.95□□□□□ -0.18
CHD1L-208ENST00000488864 DDX23Q9BUQ8 820 aaKnown RBP13.95□□□□□ -0.18
CHD1L-208ENST00000488864 CISHQ9NSE2 258 aa13.95□□□□□ -0.18
CHD1L-208ENST00000488864 DNAJB4Q9UDY4 337 aa13.95□□□□□ -0.18
CHD1L-208ENST00000488864 STK38LQ9Y2H1 464 aa13.95□□□□□ -0.18
CHD1L-208ENST00000488864 PODXLO00592 558 aa13.94□□□□□ -0.18
CHD1L-208ENST00000488864 B3GAT3O94766 335 aa13.94□□□□□ -0.18
CHD1L-208ENST00000488864 CTNNA2P26232 953 aa13.94□□□□□ -0.18
CHD1L-208ENST00000488864 CHRNA3P32297 505 aa13.94□□□□□ -0.18
CHD1L-208ENST00000488864 SSTR3P32745 418 aaPredicted RBP13.94□□□□□ -0.18
CHD1L-208ENST00000488864 RFC2P35250 354 aa13.94□□□□□ -0.18
CHD1L-208ENST00000488864 COPS2P61201 443 aa13.94□□□□□ -0.18
CHD1L-208ENST00000488864 ENOSF1Q7L5Y1 443 aa13.94□□□□□ -0.18
CHD1L-208ENST00000488864 CCDC25Q86WR0 208 aa13.94□□□□□ -0.18
CHD1L-208ENST00000488864 ERICH1Q86X53 443 aa13.94□□□□□ -0.18
CHD1L-208ENST00000488864 CPNE8Q86YQ8 564 aa13.94□□□□□ -0.18
CHD1L-208ENST00000488864 CRIPAKQ8N1N5 446 aa13.94□□□□□ -0.18
CHD1L-208ENST00000488864 LRRC52Q8N7C0 313 aa13.94□□□□□ -0.18
CHD1L-208ENST00000488864 SLC20A1Q8WUM9 679 aa13.94□□□□□ -0.18
CHD1L-208ENST00000488864 DPF3Q92784 378 aa13.94□□□□□ -0.18
CHD1L-208ENST00000488864 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.94□□□□□ -0.18
CHD1L-208ENST00000488864 NOP53Q9NZM5 478 aaKnown RBP13.94□□□□□ -0.18
CHD1L-208ENST00000488864 MTRF1LQ9UGC7 380 aaKnown RBP13.94□□□□□ -0.18
CHD1L-208ENST00000488864 HMGXB4Q9UGU5 601 aa13.94□□□□□ -0.18
CHD1L-208ENST00000488864 MICAL3Q7RTP6 2002 aa13.94□□□□□ -0.18
CHD1L-208ENST00000488864 TBKBP1A7MCY6 615 aa13.94□□□□□ -0.18
CHD1L-208ENST00000488864 ZBBXA8MT70 800 aa13.94□□□□□ -0.18
CHD1L-208ENST00000488864 KPNA7A9QM74 516 aa13.94□□□□□ -0.18
CHD1L-208ENST00000488864 I3L4J1 428 aa13.94□□□□□ -0.18
CHD1L-208ENST00000488864 HGSO14964 777 aaPredicted RBP13.94□□□□□ -0.18
CHD1L-208ENST00000488864 LRPAP1P30533 357 aa13.94□□□□□ -0.18
CHD1L-208ENST00000488864 PBX3P40426 434 aa13.94□□□□□ -0.18
CHD1L-208ENST00000488864 KCNJ1P48048 391 aa13.94□□□□□ -0.18
CHD1L-208ENST00000488864 TAF6P49848 677 aa13.94□□□□□ -0.18
CHD1L-208ENST00000488864 CCDC137Q6PK04 289 aaKnown RBP13.94□□□□□ -0.18
CHD1L-208ENST00000488864 URGCPQ8TCY9 931 aa13.94□□□□□ -0.18
CHD1L-208ENST00000488864 DYDC1Q8WWB3 177 aa13.94□□□□□ -0.18
CHD1L-208ENST00000488864 KLHL29Q96CT2 875 aa13.94□□□□□ -0.18
CHD1L-208ENST00000488864 CASD1Q96PB1 797 aa13.94□□□□□ -0.18
CHD1L-208ENST00000488864 ELAC1Q9H777 363 aaKnown RBP13.94□□□□□ -0.18
CHD1L-208ENST00000488864 VRTNQ9H8Y1 702 aa13.94□□□□□ -0.18
CHD1L-208ENST00000488864 PCYOX1Q9UHG3 505 aa13.94□□□□□ -0.18
CHD1L-208ENST00000488864 TDRD15B5MCY1 1934 aaKnown RBP13.94□□□□□ -0.18
CHD1L-208ENST00000488864 TMEM120BA0PK00 339 aa13.93□□□□□ -0.18
CHD1L-208ENST00000488864 ANKRD62A6NC57 917 aa13.93□□□□□ -0.18
CHD1L-208ENST00000488864 PPP1R12AO14974 1030 aaPredicted RBP13.93□□□□□ -0.18
CHD1L-208ENST00000488864 ITGB1P05556 798 aa13.93□□□□□ -0.18
CHD1L-208ENST00000488864 RARGP13631 454 aa13.93□□□□□ -0.18
CHD1L-208ENST00000488864 SATB1Q01826 763 aa13.93□□□□□ -0.18
CHD1L-208ENST00000488864 TUSC3Q13454 348 aa13.93□□□□□ -0.18
CHD1L-208ENST00000488864 UPP1Q16831 310 aa13.93□□□□□ -0.18
CHD1L-208ENST00000488864 VSTM1Q6UX27 236 aa13.93□□□□□ -0.18
CHD1L-208ENST00000488864 ZNF365Q70YC5 407 aa13.93□□□□□ -0.18
CHD1L-208ENST00000488864 RPUSD2Q8IZ73 545 aaKnown RBP13.93□□□□□ -0.18
CHD1L-208ENST00000488864 FITM2Q8N6M3 262 aa13.93□□□□□ -0.18
CHD1L-208ENST00000488864 RBBP8NLQ8NC74 664 aaPredicted RBP13.93□□□□□ -0.18
CHD1L-208ENST00000488864 ART4Q93070 314 aa13.93□□□□□ -0.18
CHD1L-208ENST00000488864 ZNF560Q96MR9 790 aa13.93□□□□□ -0.18
CHD1L-208ENST00000488864 TSPAN18Q96SJ8 248 aa13.93□□□□□ -0.18
CHD1L-208ENST00000488864 BCO2Q9BYV7 579 aa13.93□□□□□ -0.18
CHD1L-208ENST00000488864 CTNNAL1Q9UBT7 734 aa13.93□□□□□ -0.18
CHD1L-208ENST00000488864 PRG3Q9Y2Y8 225 aaPredicted RBP13.93□□□□□ -0.18
CHD1L-208ENST00000488864 TIMM13Q9Y5L4 95 aaPredicted RBP13.93□□□□□ -0.18
CHD1L-208ENST00000488864 HCRTO43612 131 aa13.93□□□□□ -0.18
CHD1L-208ENST00000488864 CCND1P24385 295 aa13.93□□□□□ -0.18
CHD1L-208ENST00000488864 OR1G1P47890 313 aa13.93□□□□□ -0.18
CHD1L-208ENST00000488864 MPP2Q14168 576 aa13.93□□□□□ -0.18
CHD1L-208ENST00000488864 SOWAHAQ2M3V2 549 aa13.93□□□□□ -0.18
CHD1L-208ENST00000488864 NUGGCQ68CJ6 796 aa13.93□□□□□ -0.18
CHD1L-208ENST00000488864 NOP9Q86U38 636 aaKnown RBP13.93□□□□□ -0.18
CHD1L-208ENST00000488864 NPAS4Q8IUM7 802 aa13.93□□□□□ -0.18
CHD1L-208ENST00000488864 ANKRD42Q8N9B4 389 aa13.93□□□□□ -0.18
CHD1L-208ENST00000488864 GDAP1Q8TB36 358 aa13.93□□□□□ -0.18
CHD1L-208ENST00000488864 SPDL1Q96EA4 605 aa13.93□□□□□ -0.18
CHD1L-208ENST00000488864 TWNKQ96RR1 684 aa13.93□□□□□ -0.18
CHD1L-208ENST00000488864 MRPL45Q9BRJ2 306 aaKnown RBP13.93□□□□□ -0.18
CHD1L-208ENST00000488864 IL23AQ9NPF7 189 aa13.93□□□□□ -0.18
CHD1L-208ENST00000488864 BATF3Q9NR55 127 aa13.93□□□□□ -0.18
CHD1L-208ENST00000488864 ARHGEF3Q9NR81 526 aa13.93□□□□□ -0.18
CHD1L-208ENST00000488864 ABHD14A-ACY1A0A1B0GW23 586 aa13.92□□□□□ -0.18
CHD1L-208ENST00000488864 PYGMP11217 842 aa13.92□□□□□ -0.18
CHD1L-208ENST00000488864 P4HA1P13674 534 aa13.92□□□□□ -0.18
CHD1L-208ENST00000488864 BRCC3P46736 316 aa13.92□□□□□ -0.18
CHD1L-208ENST00000488864 PEX5P50542 639 aa13.92□□□□□ -0.18
CHD1L-208ENST00000488864 WDR5P61964 334 aaKnown RBP13.92□□□□□ -0.18
CHD1L-208ENST00000488864 FPGSQ05932 587 aa13.92□□□□□ -0.18
CHD1L-208ENST00000488864 TAOK1Q7L7X3 1001 aa13.92□□□□□ -0.18
CHD1L-208ENST00000488864 EPS8L1Q8TE68 723 aa13.92□□□□□ -0.18
CHD1L-208ENST00000488864 ARHGEF2Q92974 986 aaKnown RBP13.92□□□□□ -0.18
CHD1L-208ENST00000488864 RMDN2Q96LZ7 410 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms