RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 DDX1Q92499 740 aaKnown RBP11.64□□□□□ -0.55
UBE4B-210ENST00000488228 NDRG1Q92597 394 aaKnown RBP11.64□□□□□ -0.55
UBE4B-210ENST00000488228 MRPS31Q92665 395 aaKnown RBP11.64□□□□□ -0.55
UBE4B-210ENST00000488228 SLC22A12Q96S37 553 aa11.64□□□□□ -0.55
UBE4B-210ENST00000488228 KXD1Q9BQD3 176 aa11.64□□□□□ -0.55
UBE4B-210ENST00000488228 ULBP1Q9BZM6 244 aa11.64□□□□□ -0.55
UBE4B-210ENST00000488228 TRIM5Q9C035 493 aa11.64□□□□□ -0.55
UBE4B-210ENST00000488228 ST7Q9NRC1 585 aa11.64□□□□□ -0.55
UBE4B-210ENST00000488228 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.64□□□□□ -0.55
UBE4B-210ENST00000488228 IL37Q9NZH6 218 aa11.64□□□□□ -0.55
UBE4B-210ENST00000488228 EHD2Q9NZN4 543 aa11.64□□□□□ -0.55
UBE4B-210ENST00000488228 TRPM5Q9NZQ8 1165 aa11.64□□□□□ -0.55
UBE4B-210ENST00000488228 EPS15L1Q9UBC2 864 aa11.64□□□□□ -0.55
UBE4B-210ENST00000488228 TJP2Q9UDY2 1190 aa11.64□□□□□ -0.55
UBE4B-210ENST00000488228 PCDHGC3Q9UN70 934 aa11.64□□□□□ -0.55
UBE4B-210ENST00000488228 MIA3Q5JRA6 1907 aa11.64□□□□□ -0.55
UBE4B-210ENST00000488228 TRIOO75962 3097 aa11.63□□□□□ -0.55
UBE4B-210ENST00000488228 A0A1W2PQH9 124 aa11.63□□□□□ -0.55
UBE4B-210ENST00000488228 ZNF840PA6NDX5 716 aa11.63□□□□□ -0.55
UBE4B-210ENST00000488228 FERP16591 822 aa11.63□□□□□ -0.55
UBE4B-210ENST00000488228 CHRNB2P17787 502 aa11.63□□□□□ -0.55
UBE4B-210ENST00000488228 KRT9P35527 623 aa11.63□□□□□ -0.55
UBE4B-210ENST00000488228 FMO1Q01740 532 aa11.63□□□□□ -0.55
UBE4B-210ENST00000488228 GOLGA8FQ08AF8 430 aa11.63□□□□□ -0.55
UBE4B-210ENST00000488228 GOLGA8DPQ0D2H9 430 aa11.63□□□□□ -0.55
UBE4B-210ENST00000488228 ASIC2Q16515 512 aa11.63□□□□□ -0.55
UBE4B-210ENST00000488228 FIGNQ5HY92 759 aa11.63□□□□□ -0.55
UBE4B-210ENST00000488228 SMYD5Q6GMV2 418 aa11.63□□□□□ -0.55
UBE4B-210ENST00000488228 PARM1Q6UWI2 310 aa11.63□□□□□ -0.55
UBE4B-210ENST00000488228 BHLHA9Q7RTU4 235 aa11.63□□□□□ -0.55
UBE4B-210ENST00000488228 CCDC186Q7Z3E2 898 aa11.63□□□□□ -0.55
UBE4B-210ENST00000488228 ZDHHC14Q8IZN3 488 aa11.63□□□□□ -0.55
UBE4B-210ENST00000488228 PDZD8Q8NEN9 1154 aa11.63□□□□□ -0.55
UBE4B-210ENST00000488228 CLEC4CQ8WTT0 213 aa11.63□□□□□ -0.55
UBE4B-210ENST00000488228 RSAD2Q8WXG1 361 aa11.63□□□□□ -0.55
UBE4B-210ENST00000488228 KCTD13Q8WZ19 329 aa11.63□□□□□ -0.55
UBE4B-210ENST00000488228 FGF14Q92915 247 aa11.63□□□□□ -0.55
UBE4B-210ENST00000488228 RSPRY1Q96DX4 576 aa11.63□□□□□ -0.55
UBE4B-210ENST00000488228 ANP32EQ9BTT0 268 aa11.63□□□□□ -0.55
UBE4B-210ENST00000488228 SLC46A2Q9BY10 475 aa11.63□□□□□ -0.55
UBE4B-210ENST00000488228 PDCL3Q9H2J4 239 aa11.63□□□□□ -0.55
UBE4B-210ENST00000488228 SMOC2Q9H3U7 446 aa11.63□□□□□ -0.55
UBE4B-210ENST00000488228 FBXO44Q9H4M3 255 aa11.63□□□□□ -0.55
UBE4B-210ENST00000488228 TASP1Q9H6P5 420 aa11.63□□□□□ -0.55
UBE4B-210ENST00000488228 CCSER2Q9H7U1 834 aa11.63□□□□□ -0.55
UBE4B-210ENST00000488228 NMUR1Q9HB89 426 aa11.63□□□□□ -0.55
UBE4B-210ENST00000488228 LRRC4Q9HBW1 653 aa11.63□□□□□ -0.55
UBE4B-210ENST00000488228 OSER1Q9NX31 292 aa11.63□□□□□ -0.55
UBE4B-210ENST00000488228 GDE1Q9NZC3 331 aa11.63□□□□□ -0.55
UBE4B-210ENST00000488228 LIMD1Q9UGP4 676 aa11.63□□□□□ -0.55
UBE4B-210ENST00000488228 SCML2Q9UQR0 700 aa11.63□□□□□ -0.55
UBE4B-210ENST00000488228 USP3Q9Y6I4 520 aa11.63□□□□□ -0.55
UBE4B-210ENST00000488228 NUMBLQ9Y6R0 609 aa11.63□□□□□ -0.55
UBE4B-210ENST00000488228 A0A1W2PQJ5 194 aa11.62□□□□□ -0.55
UBE4B-210ENST00000488228 E5RJQ4 531 aa11.62□□□□□ -0.55
UBE4B-210ENST00000488228 ZBED1O96006 694 aa11.62□□□□□ -0.55
UBE4B-210ENST00000488228 OAS1P00973 400 aaKnown RBP11.62□□□□□ -0.55
UBE4B-210ENST00000488228 CKMP06732 381 aa11.62□□□□□ -0.55
UBE4B-210ENST00000488228 ZDHHC11BP0C7U3 371 aa11.62□□□□□ -0.55
UBE4B-210ENST00000488228 CASP14P31944 242 aa11.62□□□□□ -0.55
UBE4B-210ENST00000488228 VIPR2P41587 438 aa11.62□□□□□ -0.55
UBE4B-210ENST00000488228 ZNF75DP51815 510 aa11.62□□□□□ -0.55
UBE4B-210ENST00000488228 NOMO3P69849 1222 aa11.62□□□□□ -0.55
UBE4B-210ENST00000488228 CDR2Q01850 454 aa11.62□□□□□ -0.55
UBE4B-210ENST00000488228 PTPN20Q4JDL3 420 aa11.62□□□□□ -0.55
UBE4B-210ENST00000488228 SFMBT2Q5VUG0 894 aa11.62□□□□□ -0.55
UBE4B-210ENST00000488228 NAA35Q5VZE5 725 aa11.62□□□□□ -0.55
UBE4B-210ENST00000488228 SPECC1LQ69YQ0 1117 aa11.62□□□□□ -0.55
UBE4B-210ENST00000488228 TMC6Q7Z403 805 aa11.62□□□□□ -0.55
UBE4B-210ENST00000488228 SCD5Q86SK9 330 aa11.62□□□□□ -0.55
UBE4B-210ENST00000488228 MON1AQ86VX9 555 aa11.62□□□□□ -0.55
UBE4B-210ENST00000488228 RNF135Q8IUD6 432 aa11.62□□□□□ -0.55
UBE4B-210ENST00000488228 GJD3Q8N144 294 aa11.62□□□□□ -0.55
UBE4B-210ENST00000488228 WDTC1Q8N5D0 677 aa11.62□□□□□ -0.55
UBE4B-210ENST00000488228 TTC16Q8NEE8 873 aa11.62□□□□□ -0.55
UBE4B-210ENST00000488228 OLIG1Q8TAK6 271 aa11.62□□□□□ -0.55
UBE4B-210ENST00000488228 OVCA2Q8WZ82 227 aa11.62□□□□□ -0.55
UBE4B-210ENST00000488228 SMARCD2Q92925 531 aa11.62□□□□□ -0.55
UBE4B-210ENST00000488228 PIWIL1Q96J94 861 aaKnown RBP11.62□□□□□ -0.55
UBE4B-210ENST00000488228 ASB16Q96NS5 453 aa11.62□□□□□ -0.55
UBE4B-210ENST00000488228 CPXM1Q96SM3 734 aa11.62□□□□□ -0.55
UBE4B-210ENST00000488228 NUP58Q9BVL2 599 aa11.62□□□□□ -0.55
UBE4B-210ENST00000488228 UBXN6Q9BZV1 441 aa11.62□□□□□ -0.55
UBE4B-210ENST00000488228 MIS12Q9H081 205 aa11.62□□□□□ -0.55
UBE4B-210ENST00000488228 SEPT11Q9NVA2 429 aaKnown RBP11.62□□□□□ -0.55
UBE4B-210ENST00000488228 COMMD8Q9NX08 183 aa11.62□□□□□ -0.55
UBE4B-210ENST00000488228 CHORDC1Q9UHD1 332 aaPredicted RBP11.62□□□□□ -0.55
UBE4B-210ENST00000488228 NAGPAQ9UK23 515 aa11.62□□□□□ -0.55
UBE4B-210ENST00000488228 MYO6Q9UM54 1294 aa11.62□□□□□ -0.55
UBE4B-210ENST00000488228 CCL26Q9Y258 94 aa11.62□□□□□ -0.55
UBE4B-210ENST00000488228 CEP83Q9Y592 693 aa11.62□□□□□ -0.55
UBE4B-210ENST00000488228 ZFP37Q9Y6Q3 630 aaPredicted RBP11.62□□□□□ -0.55
UBE4B-210ENST00000488228 MUC3AQ02505 3323 aa11.62□□□□□ -0.55
UBE4B-210ENST00000488228 MYOFQ9NZM1 2061 aa11.61□□□□□ -0.55
UBE4B-210ENST00000488228 KIAA1549LQ6ZVL6 1849 aa11.61□□□□□ -0.55
UBE4B-210ENST00000488228 TRAV19A0A0A6YYK7 116 aa11.61□□□□□ -0.55
UBE4B-210ENST00000488228 YJEFN3A6XGL0 299 aa11.61□□□□□ -0.55
UBE4B-210ENST00000488228 E7ENQ6 273 aa11.61□□□□□ -0.55
UBE4B-210ENST00000488228 ANHXE9PGG2 379 aa11.61□□□□□ -0.55
UBE4B-210ENST00000488228 MDM4O15151 490 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 121.7 ms