RNA–Protein interactions for RNA: ENST00000487932.5

PKD1-220, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 6,464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-220ENST00000487932 EPHX4Q8IUS5 362 aa15.85■□□□□ 0.13
PKD1-220ENST00000487932 FLCNQ8NFG4 579 aa15.85■□□□□ 0.13
PKD1-220ENST00000487932 IPCEF1Q8WWN9 437 aaPredicted RBP15.85■□□□□ 0.13
PKD1-220ENST00000487932 CASP10Q92851 521 aa15.85■□□□□ 0.13
PKD1-220ENST00000487932 CHP1Q99653 195 aa15.85■□□□□ 0.13
PKD1-220ENST00000487932 SMPD4Q9NXE4 827 aa15.85■□□□□ 0.13
PKD1-220ENST00000487932 SH3BP4Q9P0V3 963 aa15.85■□□□□ 0.13
PKD1-220ENST00000487932 VPS9D1Q9Y2B5 631 aa15.85■□□□□ 0.13
PKD1-220ENST00000487932 SLC9A8Q9Y2E8 581 aa15.85■□□□□ 0.13
PKD1-220ENST00000487932 TIMM13Q9Y5L4 95 aaPredicted RBP15.85■□□□□ 0.13
PKD1-220ENST00000487932 CNTNAP2Q9UHC6 1331 aa15.85■□□□□ 0.13
PKD1-220ENST00000487932 ABCA5Q8WWZ7 1642 aa15.85■□□□□ 0.13
PKD1-220ENST00000487932 CCNT2O60583 730 aaKnown RBP15.85■□□□□ 0.13
PKD1-220ENST00000487932 SCNN1BP51168 640 aa15.85■□□□□ 0.13
PKD1-220ENST00000487932 NEK10Q6ZWH5 1172 aa15.85■□□□□ 0.13
PKD1-220ENST00000487932 NECAB2Q7Z6G3 386 aa15.85■□□□□ 0.13
PKD1-220ENST00000487932 ERP27Q96DN0 273 aa15.85■□□□□ 0.13
PKD1-220ENST00000487932 PGLYRP2Q96PD5 576 aa15.85■□□□□ 0.13
PKD1-220ENST00000487932 PHACTR1Q9C0D0 580 aa15.85■□□□□ 0.13
PKD1-220ENST00000487932 UBQLN1Q9UMX0 589 aaKnown RBP15.85■□□□□ 0.13
PKD1-220ENST00000487932 MOXD2PA6NHM9 499 aa15.85■□□□□ 0.13
PKD1-220ENST00000487932 NR5A2O00482 541 aa15.85■□□□□ 0.13
PKD1-220ENST00000487932 NT5C2P49902 561 aa15.85■□□□□ 0.13
PKD1-220ENST00000487932 ST13P50502 369 aaKnown RBP15.85■□□□□ 0.13
PKD1-220ENST00000487932 DDI2Q5TDH0 399 aa15.85■□□□□ 0.13
PKD1-220ENST00000487932 LRRC8DQ7L1W4 858 aa15.85■□□□□ 0.13
PKD1-220ENST00000487932 PTAR1Q7Z6K3 402 aaPredicted RBP15.85■□□□□ 0.13
PKD1-220ENST00000487932 WDR36Q8NI36 951 aaKnown RBP15.85■□□□□ 0.13
PKD1-220ENST00000487932 ATXN3LQ9H3M9 355 aa15.85■□□□□ 0.13
PKD1-220ENST00000487932 KLHL1Q9NR64 748 aa15.85■□□□□ 0.13
PKD1-220ENST00000487932 SPATA31A3Q5VYP0 1347 aa15.85■□□□□ 0.13
PKD1-220ENST00000487932 ITGALP20701 1170 aa15.85■□□□□ 0.13
PKD1-220ENST00000487932 KCNA3P22001 575 aa15.85■□□□□ 0.13
PKD1-220ENST00000487932 CTCFP49711 727 aaPredicted RBP15.85■□□□□ 0.13
PKD1-220ENST00000487932 AMPD2Q01433 879 aa15.85■□□□□ 0.13
PKD1-220ENST00000487932 DGKKQ5KSL6 1271 aa15.85■□□□□ 0.13
PKD1-220ENST00000487932 CCDC149Q6ZUS6 474 aa15.85■□□□□ 0.13
PKD1-220ENST00000487932 MTMR12Q9C0I1 747 aa15.85■□□□□ 0.13
PKD1-220ENST00000487932 HDHD2Q9H0R4 259 aa15.85■□□□□ 0.13
PKD1-220ENST00000487932 ZCCHC17Q9NP64 241 aaKnown RBP15.85■□□□□ 0.13
PKD1-220ENST00000487932 KCNH7Q9NS40 1196 aa15.85■□□□□ 0.13
PKD1-220ENST00000487932 MRPL39Q9NYK5 338 aaKnown RBP15.85■□□□□ 0.13
PKD1-220ENST00000487932 TRPC5OSA6NMA1 111 aa15.85■□□□□ 0.13
PKD1-220ENST00000487932 EIF3DO15371 548 aaKnown RBP eCLIP15.85■□□□□ 0.131e-6■■□□□ 12.6
PKD1-220ENST00000487932 MSH4O15457 936 aa15.85■□□□□ 0.13
PKD1-220ENST00000487932 NDUFS2O75306 463 aa15.85■□□□□ 0.13
PKD1-220ENST00000487932 HLA-DQA2P01906 255 aa15.85■□□□□ 0.13
PKD1-220ENST00000487932 SERPINB1P30740 379 aa15.85■□□□□ 0.13
PKD1-220ENST00000487932 KCNT1Q5JUK3 1230 aa15.85■□□□□ 0.13
PKD1-220ENST00000487932 CYP4X1Q8N118 509 aa15.85■□□□□ 0.13
PKD1-220ENST00000487932 MIR1-1HGQ9H1L0 117 aa15.85■□□□□ 0.13
PKD1-220ENST00000487932 CDY2AQ9Y6F7 541 aa15.85■□□□□ 0.13
PKD1-220ENST00000487932 CDY1Q9Y6F8 540 aa15.85■□□□□ 0.13
PKD1-220ENST00000487932 IGSF9BQ9UPX0 1349 aa15.84■□□□□ 0.13
PKD1-220ENST00000487932 PIPSLA2A3N6 862 aa15.84■□□□□ 0.13
PKD1-220ENST00000487932 TRIM13O60858 407 aa15.84■□□□□ 0.13
PKD1-220ENST00000487932 GRK4P32298 578 aa15.84■□□□□ 0.13
PKD1-220ENST00000487932 POTEAQ6S8J7 498 aa15.84■□□□□ 0.13
PKD1-220ENST00000487932 OR8H2Q8N162 312 aa15.84■□□□□ 0.13
PKD1-220ENST00000487932 USP7Q93009 1102 aa15.84■□□□□ 0.13
PKD1-220ENST00000487932 POLG2Q9UHN1 485 aa15.84■□□□□ 0.13
PKD1-220ENST00000487932 NCKAP1Q9Y2A7 1128 aa15.84■□□□□ 0.13
PKD1-220ENST00000487932 SNTNA6NMZ2 147 aa15.84■□□□□ 0.13
PKD1-220ENST00000487932 AGTP01019 485 aa15.84■□□□□ 0.13
PKD1-220ENST00000487932 ALDH2P05091 517 aa15.84■□□□□ 0.13
PKD1-220ENST00000487932 GSSP48637 474 aa15.84■□□□□ 0.13
PKD1-220ENST00000487932 OVGP1Q12889 678 aa15.84■□□□□ 0.13
PKD1-220ENST00000487932 LPCAT1Q8NF37 534 aa15.84■□□□□ 0.13
PKD1-220ENST00000487932 VTI1BQ9UEU0 232 aa15.84■□□□□ 0.13
PKD1-220ENST00000487932 TUBE1Q9UJT0 475 aa15.84■□□□□ 0.13
PKD1-220ENST00000487932 RPS6KL1Q9Y6S9 549 aa15.84■□□□□ 0.13
PKD1-220ENST00000487932 PSMA4P25789 261 aaKnown RBP15.84■□□□□ 0.13
PKD1-220ENST00000487932 C9orf131Q5VYM1 1079 aa15.84■□□□□ 0.13
PKD1-220ENST00000487932 SLC25A24Q6NUK1 477 aa15.84■□□□□ 0.13
PKD1-220ENST00000487932 CDK20Q8IZL9 346 aa15.84■□□□□ 0.13
PKD1-220ENST00000487932 UBXN6Q9BZV1 441 aa15.84■□□□□ 0.13
PKD1-220ENST00000487932 TBC1D23Q9NUY8 699 aa15.84■□□□□ 0.13
PKD1-220ENST00000487932 MYMKA6NI61 221 aa15.84■□□□□ 0.13
PKD1-220ENST00000487932 SOX6P35712 828 aa15.84■□□□□ 0.13
PKD1-220ENST00000487932 CCNG1P51959 295 aa15.84■□□□□ 0.13
PKD1-220ENST00000487932 NCF4Q15080 339 aa15.84■□□□□ 0.13
PKD1-220ENST00000487932 KYNUQ16719 465 aa15.84■□□□□ 0.13
PKD1-220ENST00000487932 GPRC5DQ9NZD1 345 aa15.84■□□□□ 0.13
PKD1-220ENST00000487932 KDM6AO15550 1401 aaPredicted RBP15.84■□□□□ 0.13
PKD1-220ENST00000487932 CTSEP14091 401 aa15.84■□□□□ 0.13
PKD1-220ENST00000487932 MAPK1P28482 360 aa15.84■□□□□ 0.13
PKD1-220ENST00000487932 MARSP56192 900 aaKnown RBP15.84■□□□□ 0.13
PKD1-220ENST00000487932 COX10Q12887 443 aa15.84■□□□□ 0.13
PKD1-220ENST00000487932 NFYCQ13952 458 aa15.84■□□□□ 0.13
PKD1-220ENST00000487932 RNF44Q7L0R7 432 aa15.84■□□□□ 0.13
PKD1-220ENST00000487932 RGS18Q9NS28 235 aa15.84■□□□□ 0.13
PKD1-220ENST00000487932 KLC4Q9NSK0 619 aa15.84■□□□□ 0.13
PKD1-220ENST00000487932 AGPAT5Q9NUQ2 364 aa15.84■□□□□ 0.13
PKD1-220ENST00000487932 SOHLH2Q9NX45 425 aa15.84■□□□□ 0.13
PKD1-220ENST00000487932 SIK3Q9Y2K2 1263 aa15.84■□□□□ 0.13
PKD1-220ENST00000487932 ERI2A8K979 691 aaKnown RBP15.83■□□□□ 0.13
PKD1-220ENST00000487932 CSDE1O75534 798 aaKnown RBP15.83■□□□□ 0.13
PKD1-220ENST00000487932 KRT33AO76009 404 aa15.83■□□□□ 0.13
PKD1-220ENST00000487932 EDRF1Q3B7T1 1238 aa15.83■□□□□ 0.13
PKD1-220ENST00000487932 C16orf59Q7L2K0 433 aa15.83■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms