RNA–Protein interactions for RNA: ENST00000487548.2

SENP6-210, Transcript of SUMO specific peptidase 6, humanhuman

TSL 2

Gene SENP6, Length 427 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP6-210ENST00000487548 PLS1Q14651 629 aa3.62□□□□□ -1.83
SENP6-210ENST00000487548 ZNF750Q32MQ0 723 aa3.62□□□□□ -1.83
SENP6-210ENST00000487548 KHDC1LQ5JSQ8 128 aa3.62□□□□□ -1.83
SENP6-210ENST00000487548 MANEAQ5SRI9 462 aa3.62□□□□□ -1.83
SENP6-210ENST00000487548 SYDE2Q5VT97 1194 aa3.62□□□□□ -1.83
SENP6-210ENST00000487548 DEF8Q6ZN54 512 aa3.62□□□□□ -1.83
SENP6-210ENST00000487548 B4GALNT4Q76KP1 1039 aa3.62□□□□□ -1.83
SENP6-210ENST00000487548 KRT26Q7Z3Y9 468 aa3.62□□□□□ -1.83
SENP6-210ENST00000487548 B4GALNT2Q8NHY0 566 aa3.62□□□□□ -1.83
SENP6-210ENST00000487548 MTMR8Q96EF0 704 aa3.62□□□□□ -1.83
SENP6-210ENST00000487548 TMEM204Q9BSN7 226 aa3.62□□□□□ -1.83
SENP6-210ENST00000487548 GBA2Q9HCG7 927 aaPredicted RBP3.62□□□□□ -1.83
SENP6-210ENST00000487548 MCM8Q9UJA3 840 aa3.62□□□□□ -1.83
SENP6-210ENST00000487548 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.61□□□□□ -1.83
SENP6-210ENST00000487548 SHTN1A0MZ66 631 aa3.61□□□□□ -1.83
SENP6-210ENST00000487548 EME2A4GXA9 379 aaPredicted RBP3.61□□□□□ -1.83
SENP6-210ENST00000487548 SLC16A6O15403 523 aa3.61□□□□□ -1.83
SENP6-210ENST00000487548 DTNBO60941 627 aa3.61□□□□□ -1.83
SENP6-210ENST00000487548 CNOT3O75175 753 aaKnown RBP3.61□□□□□ -1.83
SENP6-210ENST00000487548 DIO1P49895 249 aa3.61□□□□□ -1.83
SENP6-210ENST00000487548 PPATQ06203 517 aa3.61□□□□□ -1.83
SENP6-210ENST00000487548 MGAT5BQ3V5L5 792 aa3.61□□□□□ -1.83
SENP6-210ENST00000487548 GFI1BQ5VTD9 330 aa3.61□□□□□ -1.83
SENP6-210ENST00000487548 ATG9BQ674R7 924 aa3.61□□□□□ -1.83
SENP6-210ENST00000487548 PTCHD4Q6ZW05 846 aa3.61□□□□□ -1.83
SENP6-210ENST00000487548 TMPRSS12Q86WS5 348 aa3.61□□□□□ -1.83
SENP6-210ENST00000487548 PPP2R3CQ969Q6 453 aa3.61□□□□□ -1.83
SENP6-210ENST00000487548 GRID2O43424 1007 aa3.6□□□□□ -1.83
SENP6-210ENST00000487548 PDCP20941 246 aa3.6□□□□□ -1.83
SENP6-210ENST00000487548 KCNA3P22001 575 aa3.6□□□□□ -1.83
SENP6-210ENST00000487548 DGKEP52429 567 aa3.6□□□□□ -1.83
SENP6-210ENST00000487548 KRTAP10-5P60370 271 aa3.6□□□□□ -1.83
SENP6-210ENST00000487548 SLC14A1Q13336 389 aa3.6□□□□□ -1.83
SENP6-210ENST00000487548 PTPN21Q16825 1174 aa3.6□□□□□ -1.83
SENP6-210ENST00000487548 PTCHD3Q3KNS1 767 aa3.6□□□□□ -1.83
SENP6-210ENST00000487548 ZNF324BQ6AW86 544 aaPredicted RBP3.6□□□□□ -1.83
SENP6-210ENST00000487548 CAPRIN2Q6IMN6 1127 aaKnown RBP3.6□□□□□ -1.83
SENP6-210ENST00000487548 VSTM1Q6UX27 236 aa3.6□□□□□ -1.83
SENP6-210ENST00000487548 DDX42Q86XP3 938 aaKnown RBP eCLIP3.6□□□□□ -1.83
SENP6-210ENST00000487548 BPIFB1Q8TDL5 484 aa3.6□□□□□ -1.83
SENP6-210ENST00000487548 RAPGEF4Q8WZA2 1011 aa3.6□□□□□ -1.83
SENP6-210ENST00000487548 SLC35A4Q96G79 324 aa3.6□□□□□ -1.83
SENP6-210ENST00000487548 ARMT1Q9H993 441 aa3.6□□□□□ -1.83
SENP6-210ENST00000487548 SEMA4BQ9NPR2 832 aaPredicted RBP3.6□□□□□ -1.83
SENP6-210ENST00000487548 SNX15Q9NRS6 342 aa3.6□□□□□ -1.83
SENP6-210ENST00000487548 COG5Q9UP83 839 aa3.6□□□□□ -1.83
SENP6-210ENST00000487548 DRG1Q9Y295 367 aaKnown RBP3.6□□□□□ -1.83
SENP6-210ENST00000487548 CAMTA2O94983 1202 aa3.59□□□□□ -1.83
SENP6-210ENST00000487548 IGKV3-20P01619 116 aa3.59□□□□□ -1.83
SENP6-210ENST00000487548 VIL1P09327 827 aaKnown RBP3.59□□□□□ -1.83
SENP6-210ENST00000487548 CREB1P16220 341 aa3.59□□□□□ -1.83
SENP6-210ENST00000487548 CCND1P24385 295 aa3.59□□□□□ -1.83
SENP6-210ENST00000487548 HSD3B2P26439 372 aa3.59□□□□□ -1.83
SENP6-210ENST00000487548 SLC11A2P49281 568 aa3.59□□□□□ -1.83
SENP6-210ENST00000487548 C4orf46Q504U0 113 aa3.59□□□□□ -1.83
SENP6-210ENST00000487548 CATIPQ7Z7H3 387 aa3.59□□□□□ -1.83
SENP6-210ENST00000487548 TMEM199Q8N511 208 aa3.59□□□□□ -1.83
SENP6-210ENST00000487548 SLC15A4Q8N697 577 aa3.59□□□□□ -1.83
SENP6-210ENST00000487548 MPLKIPQ8TAP9 179 aa3.59□□□□□ -1.83
SENP6-210ENST00000487548 IGFBPL1Q8WX77 278 aa3.59□□□□□ -1.83
SENP6-210ENST00000487548 DNASE2BQ8WZ79 361 aa3.59□□□□□ -1.83
SENP6-210ENST00000487548 NR4A3Q92570 626 aa3.59□□□□□ -1.83
SENP6-210ENST00000487548 SARS2Q9NP81 518 aaKnown RBP3.59□□□□□ -1.83
SENP6-210ENST00000487548 CLIC1O00299 241 aa3.58□□□□□ -1.84
SENP6-210ENST00000487548 NDUFB8O95169 186 aa3.58□□□□□ -1.84
SENP6-210ENST00000487548 ZRANB2O95218 330 aaKnown RBP eCLIP3.58□□□□□ -1.84
SENP6-210ENST00000487548 MTHFSP49914 203 aa3.58□□□□□ -1.84
SENP6-210ENST00000487548 MFSD13AQ14CX5 517 aa3.58□□□□□ -1.84
SENP6-210ENST00000487548 INPP5JQ15735 1006 aaPredicted RBP3.58□□□□□ -1.84
SENP6-210ENST00000487548 PLA1AQ53H76 456 aa3.58□□□□□ -1.84
SENP6-210ENST00000487548 NECAB2Q7Z6G3 386 aa3.58□□□□□ -1.84
SENP6-210ENST00000487548 NOP9Q86U38 636 aaKnown RBP3.58□□□□□ -1.84
SENP6-210ENST00000487548 FOXP4Q8IVH2 680 aaPredicted RBP3.58□□□□□ -1.84
SENP6-210ENST00000487548 SPARTQ8N0X7 666 aa3.58□□□□□ -1.84
SENP6-210ENST00000487548 MPP5Q8N3R9 675 aa3.58□□□□□ -1.84
SENP6-210ENST00000487548 DNAJC5GQ8N7S2 189 aa3.58□□□□□ -1.84
SENP6-210ENST00000487548 FAM167AQ96KS9 214 aa3.58□□□□□ -1.84
SENP6-210ENST00000487548 TMEM45AQ9NWC5 275 aa3.58□□□□□ -1.84
SENP6-210ENST00000487548 MGAT4CQ9UBM8 478 aa3.58□□□□□ -1.84
SENP6-210ENST00000487548 STAP2Q9UGK3 403 aa3.58□□□□□ -1.84
SENP6-210ENST00000487548 SIRT4Q9Y6E7 314 aaPredicted RBP3.58□□□□□ -1.84
SENP6-210ENST00000487548 TTBK1Q5TCY1 1321 aaPredicted RBP3.58□□□□□ -1.84
SENP6-210ENST00000487548 TMEM272A0A1B0GTI8 110 aa3.57□□□□□ -1.84
SENP6-210ENST00000487548 GABRDO14764 452 aa3.57□□□□□ -1.84
SENP6-210ENST00000487548 KATNA1O75449 491 aa3.57□□□□□ -1.84
SENP6-210ENST00000487548 TACR3P29371 465 aa3.57□□□□□ -1.84
SENP6-210ENST00000487548 HOXA11P31270 313 aaPredicted RBP3.57□□□□□ -1.84
SENP6-210ENST00000487548 IL6STP40189 918 aaPredicted RBP3.57□□□□□ -1.84
SENP6-210ENST00000487548 MTMR1Q13613 665 aa3.57□□□□□ -1.84
SENP6-210ENST00000487548 FAM50AQ14320 339 aaKnown RBP3.57□□□□□ -1.84
SENP6-210ENST00000487548 NFATC4Q14934 902 aa3.57□□□□□ -1.84
SENP6-210ENST00000487548 KPNB1Q14974 876 aaKnown RBP3.57□□□□□ -1.84
SENP6-210ENST00000487548 EMC10Q5UCC4 262 aa3.57□□□□□ -1.84
SENP6-210ENST00000487548 DENND2CQ68D51 928 aa3.57□□□□□ -1.84
SENP6-210ENST00000487548 RFX8Q6ZV50 586 aa3.57□□□□□ -1.84
SENP6-210ENST00000487548 ZNF329Q86UD4 541 aa3.57□□□□□ -1.84
SENP6-210ENST00000487548 FBXL14Q8N1E6 418 aa3.57□□□□□ -1.84
SENP6-210ENST00000487548 DNAJB14Q8TBM8 379 aa3.57□□□□□ -1.84
SENP6-210ENST00000487548 NEUROG1Q92886 237 aa3.57□□□□□ -1.84
SENP6-210ENST00000487548 ATP2A3Q93084 1043 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms