RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 NSUN7Q8NE18 718 aaKnown RBP6.99□□□□□ -1.29
RTFDC1-209ENST00000487211 DNERQ8NFT8 737 aa6.99□□□□□ -1.29
RTFDC1-209ENST00000487211 FNIP1Q8TF40 1166 aa6.99□□□□□ -1.29
RTFDC1-209ENST00000487211 TSPEARQ8WU66 669 aa6.99□□□□□ -1.29
RTFDC1-209ENST00000487211 TMX3Q96JJ7 454 aa6.99□□□□□ -1.29
RTFDC1-209ENST00000487211 ZSCAN31Q96LW9 406 aaPredicted RBP6.99□□□□□ -1.29
RTFDC1-209ENST00000487211 DEFB118Q96PH6 123 aa6.99□□□□□ -1.29
RTFDC1-209ENST00000487211 RMDN3Q96TC7 470 aa6.99□□□□□ -1.29
RTFDC1-209ENST00000487211 LRFN3Q9BTN0 628 aa6.99□□□□□ -1.29
RTFDC1-209ENST00000487211 ZMYND12Q9H0C1 365 aa6.99□□□□□ -1.29
RTFDC1-209ENST00000487211 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.99□□□□□ -1.29
RTFDC1-209ENST00000487211 ABHD16BQ9H3Z7 469 aa6.99□□□□□ -1.29
RTFDC1-209ENST00000487211 RIC8AQ9NPQ8 531 aa6.99□□□□□ -1.29
RTFDC1-209ENST00000487211 PXMP2Q9NR77 195 aa6.99□□□□□ -1.29
RTFDC1-209ENST00000487211 VPS54Q9P1Q0 977 aa6.99□□□□□ -1.29
RTFDC1-209ENST00000487211 CDY2AQ9Y6F7 541 aa6.99□□□□□ -1.29
RTFDC1-209ENST00000487211 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.98□□□□□ -1.29
RTFDC1-209ENST00000487211 hCG_1984214I3L0E3 225 aa6.98□□□□□ -1.29
RTFDC1-209ENST00000487211 EDIL3O43854 480 aa6.98□□□□□ -1.29
RTFDC1-209ENST00000487211 CUTAO60888 179 aa6.98□□□□□ -1.29
RTFDC1-209ENST00000487211 NDUFS2O75306 463 aa6.98□□□□□ -1.29
RTFDC1-209ENST00000487211 MAFO75444 373 aaPredicted RBP6.98□□□□□ -1.29
RTFDC1-209ENST00000487211 DEXIO95424 95 aa6.98□□□□□ -1.29
RTFDC1-209ENST00000487211 KNG1P01042 644 aa6.98□□□□□ -1.29
RTFDC1-209ENST00000487211 PI3P19957 117 aa6.98□□□□□ -1.29
RTFDC1-209ENST00000487211 C5AR1P21730 350 aa6.98□□□□□ -1.29
RTFDC1-209ENST00000487211 XPAP23025 273 aaPredicted RBP6.98□□□□□ -1.29
RTFDC1-209ENST00000487211 GLDCP23378 1020 aa6.98□□□□□ -1.29
RTFDC1-209ENST00000487211 MRPL12P52815 198 aaKnown RBP6.98□□□□□ -1.29
RTFDC1-209ENST00000487211 AKAP17AQ02040 695 aaKnown RBP6.98□□□□□ -1.29
RTFDC1-209ENST00000487211 MESP2Q0VG99 397 aa6.98□□□□□ -1.29
RTFDC1-209ENST00000487211 SSPNQ14714 243 aa6.98□□□□□ -1.29
RTFDC1-209ENST00000487211 PGM5Q15124 567 aa6.98□□□□□ -1.29
RTFDC1-209ENST00000487211 NPY5RQ15761 445 aa6.98□□□□□ -1.29
RTFDC1-209ENST00000487211 ARHGEF16Q5VV41 709 aa6.98□□□□□ -1.29
RTFDC1-209ENST00000487211 MBNL2Q5VZF2 373 aaKnown RBP6.98□□□□□ -1.29
RTFDC1-209ENST00000487211 MCTP1Q6DN14 999 aa6.98□□□□□ -1.29
RTFDC1-209ENST00000487211 CNKSR3Q6P9H4 555 aa6.98□□□□□ -1.29
RTFDC1-209ENST00000487211 CPLX2Q6PUV4 134 aaKnown RBP6.98□□□□□ -1.29
RTFDC1-209ENST00000487211 C14orf80Q86SX3 495 aa6.98□□□□□ -1.29
RTFDC1-209ENST00000487211 FBXO16Q8IX29 292 aaPredicted RBP6.98□□□□□ -1.29
RTFDC1-209ENST00000487211 ZNF713Q8N859 430 aaPredicted RBP6.98□□□□□ -1.29
RTFDC1-209ENST00000487211 IL31RAQ8NI17 732 aa6.98□□□□□ -1.29
RTFDC1-209ENST00000487211 NSUN6Q8TEA1 469 aaKnown RBP6.98□□□□□ -1.29
RTFDC1-209ENST00000487211 FAM84AQ96KN4 292 aa6.98□□□□□ -1.29
RTFDC1-209ENST00000487211 C8orf48Q96LL4 319 aa6.98□□□□□ -1.29
RTFDC1-209ENST00000487211 PWWP2AQ96N64 755 aa6.98□□□□□ -1.29
RTFDC1-209ENST00000487211 IWS1Q96ST2 819 aa6.98□□□□□ -1.29
RTFDC1-209ENST00000487211 PDCD2LQ9BRP1 358 aa6.98□□□□□ -1.29
RTFDC1-209ENST00000487211 ACE2Q9BYF1 805 aaPredicted RBP6.98□□□□□ -1.29
RTFDC1-209ENST00000487211 SPATA6Q9NWH7 488 aaPredicted RBP6.98□□□□□ -1.29
RTFDC1-209ENST00000487211 RTEL1Q9NZ71 1219 aa6.98□□□□□ -1.29
RTFDC1-209ENST00000487211 ORC3Q9UBD5 711 aaPredicted RBP6.98□□□□□ -1.29
RTFDC1-209ENST00000487211 ADD3Q9UEY8 706 aaKnown RBP6.98□□□□□ -1.29
RTFDC1-209ENST00000487211 NRBP1Q9UHY1 535 aa6.98□□□□□ -1.29
RTFDC1-209ENST00000487211 FBXO10Q9UK96 956 aa6.98□□□□□ -1.29
RTFDC1-209ENST00000487211 PNMA8BQ9ULN7 279 aaPredicted RBP6.98□□□□□ -1.29
RTFDC1-209ENST00000487211 PCDHA6Q9UN73 950 aa6.98□□□□□ -1.29
RTFDC1-209ENST00000487211 KCNJ14Q9UNX9 436 aa6.98□□□□□ -1.29
RTFDC1-209ENST00000487211 CNPY2Q9Y2B0 182 aa6.98□□□□□ -1.29
RTFDC1-209ENST00000487211 LOC102724159A0A0B4J2E5 919 aa6.97□□□□□ -1.29
RTFDC1-209ENST00000487211 A0A0G2JNJ9 132 aa6.97□□□□□ -1.29
RTFDC1-209ENST00000487211 ESYT2A0FGR8 921 aa6.97□□□□□ -1.29
RTFDC1-209ENST00000487211 SEPT4O43236 478 aa6.97□□□□□ -1.29
RTFDC1-209ENST00000487211 EIF3JO75822 258 aaKnown RBP6.97□□□□□ -1.29
RTFDC1-209ENST00000487211 CDKL5O76039 1030 aa6.97□□□□□ -1.29
RTFDC1-209ENST00000487211 ZRANB2O95218 330 aaKnown RBP eCLIP6.97□□□□□ -1.29
RTFDC1-209ENST00000487211 TFRCP02786 760 aaKnown RBP6.97□□□□□ -1.29
RTFDC1-209ENST00000487211 COL6A1P12109 1028 aa6.97□□□□□ -1.29
RTFDC1-209ENST00000487211 MYCLP12524 364 aaPredicted RBP6.97□□□□□ -1.29
RTFDC1-209ENST00000487211 GPR15P49685 360 aa6.97□□□□□ -1.29
RTFDC1-209ENST00000487211 ADCY7P51828 1080 aa6.97□□□□□ -1.29
RTFDC1-209ENST00000487211 NLRP5P59047 1200 aa6.97□□□□□ -1.29
RTFDC1-209ENST00000487211 PWP2Q15269 919 aaKnown RBP6.97□□□□□ -1.29
RTFDC1-209ENST00000487211 STXBP2Q15833 593 aa6.97□□□□□ -1.29
RTFDC1-209ENST00000487211 GJC2Q5T442 439 aaPredicted RBP6.97□□□□□ -1.29
RTFDC1-209ENST00000487211 JAKMIP3Q5VZ66 844 aa6.97□□□□□ -1.29
RTFDC1-209ENST00000487211 NXNQ6DKJ4 435 aa6.97□□□□□ -1.29
RTFDC1-209ENST00000487211 GAREM2Q75VX8 874 aa6.97□□□□□ -1.29
RTFDC1-209ENST00000487211 TCEAL8Q8IYN2 117 aa6.97□□□□□ -1.29
RTFDC1-209ENST00000487211 U2AF1L4Q8WU68 220 aaKnown RBP6.97□□□□□ -1.29
RTFDC1-209ENST00000487211 ZCCHC14Q8WYQ9 949 aaKnown RBP6.97□□□□□ -1.29
RTFDC1-209ENST00000487211 CUL5Q93034 780 aa6.97□□□□□ -1.29
RTFDC1-209ENST00000487211 DYDC2Q96IM9 177 aa6.97□□□□□ -1.29
RTFDC1-209ENST00000487211 PGBD1Q96JS3 809 aa6.97□□□□□ -1.29
RTFDC1-209ENST00000487211 LLPHQ9BRT6 129 aaKnown RBP6.97□□□□□ -1.29
RTFDC1-209ENST00000487211 SH3GLB2Q9NR46 395 aa6.97□□□□□ -1.29
RTFDC1-209ENST00000487211 SAE1Q9UBE0 346 aaPredicted RBP6.97□□□□□ -1.29
RTFDC1-209ENST00000487211 Q9UFV3 132 aa6.97□□□□□ -1.29
RTFDC1-209ENST00000487211 DDX20Q9UHI6 824 aaKnown RBP6.97□□□□□ -1.29
RTFDC1-209ENST00000487211 EVLQ9UI08 416 aaPredicted RBP6.97□□□□□ -1.29
RTFDC1-209ENST00000487211 CDC42EP3Q9UKI2 254 aa6.97□□□□□ -1.29
RTFDC1-209ENST00000487211 ZHX1Q9UKY1 873 aaPredicted RBP6.97□□□□□ -1.29
RTFDC1-209ENST00000487211 OGDHLQ9ULD0 1010 aa6.97□□□□□ -1.29
RTFDC1-209ENST00000487211 FAM184BQ9ULE4 1060 aa6.97□□□□□ -1.29
RTFDC1-209ENST00000487211 CNOT6Q9ULM6 557 aaKnown RBP6.97□□□□□ -1.29
RTFDC1-209ENST00000487211 ACACBO00763 2458 aa6.96□□□□□ -1.29
RTFDC1-209ENST00000487211 ASH1LQ9NR48 2969 aaKnown RBP6.96□□□□□ -1.29
RTFDC1-209ENST00000487211 NCOR2Q9Y618 2525 aa6.96□□□□□ -1.29
RTFDC1-209ENST00000487211 ZNF318Q5VUA4 2279 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms