RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 CA14Q9ULX7 337 aa5.78□□□□□ -1.48
PRPF38A-203ENST00000487160 HS3ST4Q9Y661 456 aa5.78□□□□□ -1.48
PRPF38A-203ENST00000487160 OR2W5A6NFC9 320 aa5.77□□□□□ -1.49
PRPF38A-203ENST00000487160 ZAR1LA6NP61 321 aa5.77□□□□□ -1.49
PRPF38A-203ENST00000487160 FCHO1O14526 889 aa5.77□□□□□ -1.49
PRPF38A-203ENST00000487160 PCDH17O14917 1159 aa5.77□□□□□ -1.49
PRPF38A-203ENST00000487160 DNPH1O43598 174 aa5.77□□□□□ -1.49
PRPF38A-203ENST00000487160 SNX2O60749 519 aa5.77□□□□□ -1.49
PRPF38A-203ENST00000487160 NTSR2O95665 410 aa5.77□□□□□ -1.49
PRPF38A-203ENST00000487160 VIPP01282 170 aa5.77□□□□□ -1.49
PRPF38A-203ENST00000487160 ITGA2BP08514 1039 aa5.77□□□□□ -1.49
PRPF38A-203ENST00000487160 YY1P25490 414 aa5.77□□□□□ -1.49
PRPF38A-203ENST00000487160 CTSWP56202 376 aa5.77□□□□□ -1.49
PRPF38A-203ENST00000487160 ARL4CP56559 192 aa5.77□□□□□ -1.49
PRPF38A-203ENST00000487160 TIAL1Q01085 375 aaKnown RBP eCLIP5.77□□□□□ -1.49
PRPF38A-203ENST00000487160 GUCY1B3Q02153 619 aa5.77□□□□□ -1.49
PRPF38A-203ENST00000487160 ATP1A4Q13733 1029 aa5.77□□□□□ -1.49
PRPF38A-203ENST00000487160 CDSNQ15517 529 aa5.77□□□□□ -1.49
PRPF38A-203ENST00000487160 TRIM71Q2Q1W2 868 aaKnown RBP5.77□□□□□ -1.49
PRPF38A-203ENST00000487160 NRN1LQ496H8 165 aa5.77□□□□□ -1.49
PRPF38A-203ENST00000487160 ERICH6BQ5W0A0 696 aa5.77□□□□□ -1.49
PRPF38A-203ENST00000487160 SLC9A4Q6AI14 798 aa5.77□□□□□ -1.49
PRPF38A-203ENST00000487160 KLHL17Q6TDP4 642 aa5.77□□□□□ -1.49
PRPF38A-203ENST00000487160 IZUMO1Q8IYV9 350 aa5.77□□□□□ -1.49
PRPF38A-203ENST00000487160 B3GALNT2Q8NCR0 500 aa5.77□□□□□ -1.49
PRPF38A-203ENST00000487160 OTUD7AQ8TE49 926 aaPredicted RBP5.77□□□□□ -1.49
PRPF38A-203ENST00000487160 SSH3Q8TE77 659 aa5.77□□□□□ -1.49
PRPF38A-203ENST00000487160 LPIN2Q92539 896 aa5.77□□□□□ -1.49
PRPF38A-203ENST00000487160 DVL3Q92997 716 aaPredicted RBP5.77□□□□□ -1.49
PRPF38A-203ENST00000487160 PLEKHG4BQ96PX9 1271 aa5.77□□□□□ -1.49
PRPF38A-203ENST00000487160 CDK5RAP1Q96SZ6 601 aaKnown RBP5.77□□□□□ -1.49
PRPF38A-203ENST00000487160 FAM167BQ9BTA0 163 aa5.77□□□□□ -1.49
PRPF38A-203ENST00000487160 GOLGA2P5Q9HBQ8 144 aa5.77□□□□□ -1.49
PRPF38A-203ENST00000487160 HERC5Q9UII4 1024 aaKnown RBP5.77□□□□□ -1.49
PRPF38A-203ENST00000487160 GTF2A1LQ9UNN4 478 aa5.77□□□□□ -1.49
PRPF38A-203ENST00000487160 ABCC8Q09428 1581 aa5.76□□□□□ -1.49
PRPF38A-203ENST00000487160 PBRM1Q86U86 1689 aa5.76□□□□□ -1.49
PRPF38A-203ENST00000487160 J3KTA2 159 aa5.76□□□□□ -1.49
PRPF38A-203ENST00000487160 ZSCAN9O15535 394 aaPredicted RBP5.76□□□□□ -1.49
PRPF38A-203ENST00000487160 VNN1O95497 513 aa5.76□□□□□ -1.49
PRPF38A-203ENST00000487160 ANXA6P08133 673 aa5.76□□□□□ -1.49
PRPF38A-203ENST00000487160 C1SP09871 688 aa5.76□□□□□ -1.49
PRPF38A-203ENST00000487160 SRGNP10124 158 aa5.76□□□□□ -1.49
PRPF38A-203ENST00000487160 EPHA3P29320 983 aa5.76□□□□□ -1.49
PRPF38A-203ENST00000487160 MAGEA10P43363 369 aaPredicted RBP5.76□□□□□ -1.49
PRPF38A-203ENST00000487160 MAPK9P45984 424 aa5.76□□□□□ -1.49
PRPF38A-203ENST00000487160 ALDH18A1P54886 795 aaKnown RBP5.76□□□□□ -1.49
PRPF38A-203ENST00000487160 SCAPQ12770 1279 aa5.76□□□□□ -1.49
PRPF38A-203ENST00000487160 EIF2B5Q13144 721 aaKnown RBP5.76□□□□□ -1.49
PRPF38A-203ENST00000487160 SF3B3Q15393 1217 aaKnown RBP5.76□□□□□ -1.49
PRPF38A-203ENST00000487160 TIGD2Q4W5G0 525 aa5.76□□□□□ -1.49
PRPF38A-203ENST00000487160 CLEC9AQ6UXN8 241 aa5.76□□□□□ -1.49
PRPF38A-203ENST00000487160 DTX2Q86UW9 622 aa5.76□□□□□ -1.49
PRPF38A-203ENST00000487160 CCDC117Q8IWD4 279 aaPredicted RBP5.76□□□□□ -1.49
PRPF38A-203ENST00000487160 C11orf44Q8N8P7 122 aa5.76□□□□□ -1.49
PRPF38A-203ENST00000487160 ABHD5Q8WTS1 349 aa5.76□□□□□ -1.49
PRPF38A-203ENST00000487160 RUBCNQ92622 972 aa5.76□□□□□ -1.49
PRPF38A-203ENST00000487160 HAPLN3Q96S86 360 aa5.76□□□□□ -1.49
PRPF38A-203ENST00000487160 KRTAP3-1Q9BYR8 98 aa5.76□□□□□ -1.49
PRPF38A-203ENST00000487160 INO80BQ9C086 356 aaPredicted RBP5.76□□□□□ -1.49
PRPF38A-203ENST00000487160 HELLSQ9NRZ9 838 aa5.76□□□□□ -1.49
PRPF38A-203ENST00000487160 C9orf78Q9NZ63 289 aaPredicted RBP5.76□□□□□ -1.49
PRPF38A-203ENST00000487160 LPAR3Q9UBY5 353 aa5.76□□□□□ -1.49
PRPF38A-203ENST00000487160 SRP68Q9UHB9 627 aaKnown RBP5.76□□□□□ -1.49
PRPF38A-203ENST00000487160 FZD1Q9UP38 647 aa5.76□□□□□ -1.49
PRPF38A-203ENST00000487160 USP22Q9UPT9 525 aa5.76□□□□□ -1.49
PRPF38A-203ENST00000487160 SLC27A6Q9Y2P4 619 aa5.76□□□□□ -1.49
PRPF38A-203ENST00000487160 CENPVL1A0A0U1RR11 272 aa5.75□□□□□ -1.49
PRPF38A-203ENST00000487160 FOXD2O60548 495 aaPredicted RBP5.75□□□□□ -1.49
PRPF38A-203ENST00000487160 PPFIA4O75335 1185 aa5.75□□□□□ -1.49
PRPF38A-203ENST00000487160 ACTL6BO94805 426 aa5.75□□□□□ -1.49
PRPF38A-203ENST00000487160 RHOP08100 348 aa5.75□□□□□ -1.49
PRPF38A-203ENST00000487160 ZNF20P17024 532 aa5.75□□□□□ -1.49
PRPF38A-203ENST00000487160 KLRK1P26718 216 aa5.75□□□□□ -1.49
PRPF38A-203ENST00000487160 ATXN1P54253 815 aaKnown RBP5.75□□□□□ -1.49
PRPF38A-203ENST00000487160 PNLIPRP1P54315 467 aa5.75□□□□□ -1.49
PRPF38A-203ENST00000487160 POLE2P56282 527 aa5.75□□□□□ -1.49
PRPF38A-203ENST00000487160 FZD5Q13467 585 aa5.75□□□□□ -1.49
PRPF38A-203ENST00000487160 GRM4Q14833 912 aa5.75□□□□□ -1.49
PRPF38A-203ENST00000487160 ANKRD18AQ8IVF6 992 aa5.75□□□□□ -1.49
PRPF38A-203ENST00000487160 TOR1AIP2Q8NFQ8 470 aa5.75□□□□□ -1.49
PRPF38A-203ENST00000487160 MBD3L2Q8NHZ7 208 aaPredicted RBP5.75□□□□□ -1.49
PRPF38A-203ENST00000487160 SCAMP5Q8TAC9 235 aa5.75□□□□□ -1.49
PRPF38A-203ENST00000487160 MYCBPAPQ8TBZ2 947 aa5.75□□□□□ -1.49
PRPF38A-203ENST00000487160 GLG1Q92896 1179 aa5.75□□□□□ -1.49
PRPF38A-203ENST00000487160 PABPC3Q9H361 631 aaKnown RBP5.75□□□□□ -1.49
PRPF38A-203ENST00000487160 TP63Q9H3D4 680 aaPredicted RBP5.75□□□□□ -1.49
PRPF38A-203ENST00000487160 FSCN3Q9NQT6 498 aa5.75□□□□□ -1.49
PRPF38A-203ENST00000487160 TBCCD1Q9NVR7 557 aa5.75□□□□□ -1.49
PRPF38A-203ENST00000487160 ANKFY1Q9P2R3 1169 aa5.75□□□□□ -1.49
PRPF38A-203ENST00000487160 RIMKLBQ9ULI2 386 aa5.75□□□□□ -1.49
PRPF38A-203ENST00000487160 SNAPC4Q5SXM2 1469 aa5.75□□□□□ -1.49
PRPF38A-203ENST00000487160 WDR97A6NE52 1622 aa5.74□□□□□ -1.49
PRPF38A-203ENST00000487160 PNMA6EA0A0J9YXQ4 647 aa5.74□□□□□ -1.49
PRPF38A-203ENST00000487160 A1L4Q6 167 aa5.74□□□□□ -1.49
PRPF38A-203ENST00000487160 EXOC5O00471 708 aa5.74□□□□□ -1.49
PRPF38A-203ENST00000487160 IRAK2O43187 625 aa5.74□□□□□ -1.49
PRPF38A-203ENST00000487160 SH3BP5O60239 455 aa5.74□□□□□ -1.49
PRPF38A-203ENST00000487160 RBL1P28749 1068 aa5.74□□□□□ -1.49
PRPF38A-203ENST00000487160 TIRAPP58753 221 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms