RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 PEX2P28328 305 aa12.9□□□□□ -0.34
HSPG2-211ENST00000486901 BPIFB4P59827 614 aa12.9□□□□□ -0.34
HSPG2-211ENST00000486901 AP1B1Q10567 949 aa12.9□□□□□ -0.34
HSPG2-211ENST00000486901 ASPHQ12797 758 aa12.9□□□□□ -0.34
HSPG2-211ENST00000486901 FSTL1Q12841 308 aa12.9□□□□□ -0.34
HSPG2-211ENST00000486901 CDC16Q13042 620 aa12.9□□□□□ -0.34
HSPG2-211ENST00000486901 CNPY1Q3B7I2 92 aa12.9□□□□□ -0.34
HSPG2-211ENST00000486901 SFT2D3Q587I9 215 aa12.9□□□□□ -0.34
HSPG2-211ENST00000486901 SATL1Q86VE3 508 aa12.9□□□□□ -0.34
HSPG2-211ENST00000486901 C12orf56Q8IXR9 622 aa12.9□□□□□ -0.34
HSPG2-211ENST00000486901 ADAM32Q8TC27 787 aa12.9□□□□□ -0.34
HSPG2-211ENST00000486901 E2F7Q96AV8 911 aa12.9□□□□□ -0.34
HSPG2-211ENST00000486901 TRIM11Q96F44 468 aa12.9□□□□□ -0.34
HSPG2-211ENST00000486901 PIWIL1Q96J94 861 aaKnown RBP12.9□□□□□ -0.34
HSPG2-211ENST00000486901 GCNAQ96QF7 691 aa12.9□□□□□ -0.34
HSPG2-211ENST00000486901 SAR1AQ9NR31 198 aa12.9□□□□□ -0.34
HSPG2-211ENST00000486901 SMYD2Q9NRG4 433 aa12.9□□□□□ -0.34
HSPG2-211ENST00000486901 SENP1Q9P0U3 644 aa12.9□□□□□ -0.34
HSPG2-211ENST00000486901 STX18Q9P2W9 335 aaKnown RBP12.9□□□□□ -0.34
HSPG2-211ENST00000486901 SLC24A2Q9UI40 661 aa12.9□□□□□ -0.34
HSPG2-211ENST00000486901 PCDHA10Q9Y5I2 948 aa12.9□□□□□ -0.34
HSPG2-211ENST00000486901 YDJCA8MPS7 323 aa12.9□□□□□ -0.34
HSPG2-211ENST00000486901 PHKA2P46019 1235 aa12.9□□□□□ -0.34
HSPG2-211ENST00000486901 AQP4P55087 323 aa12.9□□□□□ -0.34
HSPG2-211ENST00000486901 DLG1Q12959 904 aa12.9□□□□□ -0.34
HSPG2-211ENST00000486901 DPYSL3Q14195 570 aa12.9□□□□□ -0.34
HSPG2-211ENST00000486901 DLGAP5Q15398 846 aa12.9□□□□□ -0.34
HSPG2-211ENST00000486901 TRIP10Q15642 601 aa12.9□□□□□ -0.34
HSPG2-211ENST00000486901 RABGAP1LQ5R372 815 aa12.9□□□□□ -0.34
HSPG2-211ENST00000486901 STRIP1Q5VSL9 837 aa12.9□□□□□ -0.34
HSPG2-211ENST00000486901 NAT8LQ8N9F0 302 aa12.9□□□□□ -0.34
HSPG2-211ENST00000486901 TMC2Q8TDI7 906 aa12.9□□□□□ -0.34
HSPG2-211ENST00000486901 VTI1AQ96AJ9 217 aa12.9□□□□□ -0.34
HSPG2-211ENST00000486901 PDCD2LQ9BRP1 358 aa12.9□□□□□ -0.34
HSPG2-211ENST00000486901 PHACTR1Q9C0D0 580 aa12.9□□□□□ -0.34
HSPG2-211ENST00000486901 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.9□□□□□ -0.34
HSPG2-211ENST00000486901 RHBDL2Q9NX52 303 aa12.9□□□□□ -0.34
HSPG2-211ENST00000486901 TRPC5Q9UL62 973 aaPredicted RBP12.9□□□□□ -0.34
HSPG2-211ENST00000486901 MRPL42Q9Y6G3 142 aaKnown RBP12.9□□□□□ -0.34
HSPG2-211ENST00000486901 MAGEA13PA6NCF6 341 aa12.89□□□□□ -0.35
HSPG2-211ENST00000486901 IRF6O14896 467 aa12.89□□□□□ -0.35
HSPG2-211ENST00000486901 SCNN1BP51168 640 aa12.89□□□□□ -0.35
HSPG2-211ENST00000486901 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.89□□□□□ -0.35
HSPG2-211ENST00000486901 DEFB132Q7Z7B7 95 aa12.89□□□□□ -0.35
HSPG2-211ENST00000486901 PIP4K2CQ8TBX8 421 aa12.89□□□□□ -0.35
HSPG2-211ENST00000486901 MZB1Q8WU39 189 aa12.89□□□□□ -0.35
HSPG2-211ENST00000486901 UNKQ9C0B0 810 aaKnown RBP12.89□□□□□ -0.35
HSPG2-211ENST00000486901 ZNF358Q9NW07 568 aa12.89□□□□□ -0.35
HSPG2-211ENST00000486901 ZC3H7BQ9UGR2 993 aaKnown RBP12.89□□□□□ -0.35
HSPG2-211ENST00000486901 HMGXB4Q9UGU5 601 aa12.89□□□□□ -0.35
HSPG2-211ENST00000486901 SHOC2Q9UQ13 582 aa12.89□□□□□ -0.35
HSPG2-211ENST00000486901 MTO1Q9Y2Z2 717 aaKnown RBP12.89□□□□□ -0.35
HSPG2-211ENST00000486901 SNCAIPQ9Y6H5 919 aa12.89□□□□□ -0.35
HSPG2-211ENST00000486901 IQANK1A0A1B0GTG1 560 aa12.89□□□□□ -0.35
HSPG2-211ENST00000486901 RTN3O95197 1032 aaPredicted RBP12.89□□□□□ -0.35
HSPG2-211ENST00000486901 KLHL38Q2WGJ6 581 aa12.89□□□□□ -0.35
HSPG2-211ENST00000486901 HPS6Q86YV9 775 aa12.89□□□□□ -0.35
HSPG2-211ENST00000486901 C4orf19Q8IY42 314 aa12.89□□□□□ -0.35
HSPG2-211ENST00000486901 LRRC71Q8N4P6 559 aa12.89□□□□□ -0.35
HSPG2-211ENST00000486901 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.89□□□□□ -0.35
HSPG2-211ENST00000486901 ATG4CQ96DT6 458 aa12.89□□□□□ -0.35
HSPG2-211ENST00000486901 KIF13BQ9NQT8 1826 aa12.89□□□□□ -0.35
HSPG2-211ENST00000486901 MCF2LO15068 1137 aa12.89□□□□□ -0.35
HSPG2-211ENST00000486901 EXTL3O43909 919 aa12.89□□□□□ -0.35
HSPG2-211ENST00000486901 LMNAP02545 664 aaKnown RBP12.89□□□□□ -0.35
HSPG2-211ENST00000486901 CSH1P0DML2 217 aa12.89□□□□□ -0.35
HSPG2-211ENST00000486901 CSH2P0DML3 217 aa12.89□□□□□ -0.35
HSPG2-211ENST00000486901 SAT1P21673 171 aa12.89□□□□□ -0.35
HSPG2-211ENST00000486901 DSG1Q02413 1049 aa12.89□□□□□ -0.35
HSPG2-211ENST00000486901 TRPC3Q13507 836 aa12.89□□□□□ -0.35
HSPG2-211ENST00000486901 C6orf163Q5TEZ5 329 aa12.89□□□□□ -0.35
HSPG2-211ENST00000486901 OLFML2BQ68BL8 750 aa12.89□□□□□ -0.35
HSPG2-211ENST00000486901 APOPT1Q96IL0 206 aa12.89□□□□□ -0.35
HSPG2-211ENST00000486901 CPXM1Q96SM3 734 aa12.89□□□□□ -0.35
HSPG2-211ENST00000486901 ECSITQ9BQ95 431 aa12.89□□□□□ -0.35
HSPG2-211ENST00000486901 VPS11Q9H270 941 aa12.89□□□□□ -0.35
HSPG2-211ENST00000486901 NGRNQ9NPE2 291 aaKnown RBP12.89□□□□□ -0.35
HSPG2-211ENST00000486901 FARP1Q9Y4F1 1045 aaPredicted RBP12.89□□□□□ -0.35
HSPG2-211ENST00000486901 UBIAD1Q9Y5Z9 338 aa12.89□□□□□ -0.35
HSPG2-211ENST00000486901 GOLGA8QA0A0J9YX86 632 aa12.88□□□□□ -0.35
HSPG2-211ENST00000486901 GOLGA8OA6NCC3 632 aa12.88□□□□□ -0.35
HSPG2-211ENST00000486901 GOLGA8NF8WBI6 632 aa12.88□□□□□ -0.35
HSPG2-211ENST00000486901 TRAFD1O14545 582 aaPredicted RBP12.88□□□□□ -0.35
HSPG2-211ENST00000486901 TRPA1O75762 1119 aa12.88□□□□□ -0.35
HSPG2-211ENST00000486901 TCN1P20061 433 aaPredicted RBP12.88□□□□□ -0.35
HSPG2-211ENST00000486901 MIPP30301 263 aa12.88□□□□□ -0.35
HSPG2-211ENST00000486901 CUL3Q13618 768 aa12.88□□□□□ -0.35
HSPG2-211ENST00000486901 GK3PQ14409 553 aa12.88□□□□□ -0.35
HSPG2-211ENST00000486901 ZRSR2Q15696 482 aaKnown RBP12.88□□□□□ -0.35
HSPG2-211ENST00000486901 ZC3H12AQ5D1E8 599 aaKnown RBP12.88□□□□□ -0.35
HSPG2-211ENST00000486901 PTAR1Q7Z6K3 402 aaPredicted RBP12.88□□□□□ -0.35
HSPG2-211ENST00000486901 TDRPQ86YL5 185 aa12.88□□□□□ -0.35
HSPG2-211ENST00000486901 SLC35B2Q8TB61 432 aa12.88□□□□□ -0.35
HSPG2-211ENST00000486901 EZH1Q92800 747 aaPredicted RBP12.88□□□□□ -0.35
HSPG2-211ENST00000486901 GATA6Q92908 595 aa12.88□□□□□ -0.35
HSPG2-211ENST00000486901 GORASP1Q9BQQ3 440 aa12.88□□□□□ -0.35
HSPG2-211ENST00000486901 DNAJC16Q9Y2G8 782 aa12.88□□□□□ -0.35
HSPG2-211ENST00000486901 CFLARO15519 480 aa12.88□□□□□ -0.35
HSPG2-211ENST00000486901 ICAM1P05362 532 aa12.88□□□□□ -0.35
HSPG2-211ENST00000486901 NPR1P16066 1061 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms