RNA–Protein interactions for RNA: ENST00000486066.5

CHRD-216, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 546 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-216ENST00000486066 ACCSQ96QU6 501 aa20.55■□□□□ 0.88
CHRD-216ENST00000486066 SMPD4Q9NXE4 827 aa20.55■□□□□ 0.88
CHRD-216ENST00000486066 CFAP97Q9P2B7 532 aa20.55■□□□□ 0.88
CHRD-216ENST00000486066 EXOC7Q9UPT5 735 aa20.55■□□□□ 0.88
CHRD-216ENST00000486066 STARD13Q9Y3M8 1113 aa20.55■□□□□ 0.88
CHRD-216ENST00000486066 KIF3AQ9Y496 699 aa20.55■□□□□ 0.88
CHRD-216ENST00000486066 IGHV1OR15-9A0A0B4J2B8 117 aa20.54■□□□□ 0.88
CHRD-216ENST00000486066 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.54■□□□□ 0.88
CHRD-216ENST00000486066 ARHGAP33O14559 1287 aa20.54■□□□□ 0.88
CHRD-216ENST00000486066 TRIM66O15016 1216 aa20.54■□□□□ 0.88
CHRD-216ENST00000486066 HOXC11O43248 304 aaPredicted RBP20.54■□□□□ 0.88
CHRD-216ENST00000486066 CFIP05156 583 aa20.54■□□□□ 0.88
CHRD-216ENST00000486066 GRIK1P39086 918 aa20.54■□□□□ 0.88
CHRD-216ENST00000486066 KDSRQ06136 332 aa20.54■□□□□ 0.88
CHRD-216ENST00000486066 TAF10Q12962 218 aa20.54■□□□□ 0.88
CHRD-216ENST00000486066 SOWAHCQ53LP3 525 aaPredicted RBP20.54■□□□□ 0.88
CHRD-216ENST00000486066 LY6G5CQ5SRR4 150 aa20.54■□□□□ 0.88
CHRD-216ENST00000486066 MIB1Q86YT6 1006 aa20.54■□□□□ 0.88
CHRD-216ENST00000486066 OR2I1PQ8NGU4 316 aa20.54■□□□□ 0.88
CHRD-216ENST00000486066 HPDLQ96IR7 371 aa20.54■□□□□ 0.88
CHRD-216ENST00000486066 MRPL44Q9H9J2 332 aaKnown RBP20.54■□□□□ 0.88
CHRD-216ENST00000486066 EHD2Q9NZN4 543 aa20.54■□□□□ 0.88
CHRD-216ENST00000486066 CALCOCO1Q9P1Z2 691 aa20.54■□□□□ 0.88
CHRD-216ENST00000486066 BCCIPQ9P287 314 aaKnown RBP eCLIP20.54■□□□□ 0.88
CHRD-216ENST00000486066 E2F8A0AVK6 867 aa20.53■□□□□ 0.88
CHRD-216ENST00000486066 GOLGA8IPA6NC78 632 aa20.53■□□□□ 0.88
CHRD-216ENST00000486066 GOLGA8JA6NMD2 632 aa20.53■□□□□ 0.88
CHRD-216ENST00000486066 OPHN1O60890 802 aa20.53■□□□□ 0.88
CHRD-216ENST00000486066 BMP15O95972 392 aa20.53■□□□□ 0.88
CHRD-216ENST00000486066 KRT19P08727 400 aa20.53■□□□□ 0.88
CHRD-216ENST00000486066 GAP43P17677 238 aa20.53■□□□□ 0.88
CHRD-216ENST00000486066 GFPT1Q06210 699 aaPredicted RBP20.53■□□□□ 0.88
CHRD-216ENST00000486066 ZNF33AQ06730 810 aa20.53■□□□□ 0.88
CHRD-216ENST00000486066 HNRNPDQ14103 355 aaKnown RBP20.53■□□□□ 0.88
CHRD-216ENST00000486066 SLC36A4Q6YBV0 504 aa20.53■□□□□ 0.88
CHRD-216ENST00000486066 DDX42Q86XP3 938 aaKnown RBP eCLIP20.53■□□□□ 0.88
CHRD-216ENST00000486066 HDDC3Q8N4P3 179 aa20.53■□□□□ 0.88
CHRD-216ENST00000486066 ADAMTS14Q8WXS8 1223 aa20.53■□□□□ 0.88
CHRD-216ENST00000486066 OTUB2Q96DC9 234 aa20.53■□□□□ 0.88
CHRD-216ENST00000486066 EPSTI1Q96J88 318 aa20.53■□□□□ 0.88
CHRD-216ENST00000486066 TBC1D14Q9P2M4 693 aa20.53■□□□□ 0.88
CHRD-216ENST00000486066 STK17AQ9UEE5 414 aa20.53■□□□□ 0.88
CHRD-216ENST00000486066 FLNBO75369 2602 aaKnown RBP20.53■□□□□ 0.88
CHRD-216ENST00000486066 A0A1W2PQD8 194 aa20.52■□□□□ 0.88
CHRD-216ENST00000486066 TULP3O75386 442 aa20.52■□□□□ 0.88
CHRD-216ENST00000486066 TMEM191BP0C7N4 346 aa20.52■□□□□ 0.88
CHRD-216ENST00000486066 RPL6Q02878 288 aaKnown RBP20.52■□□□□ 0.88
CHRD-216ENST00000486066 SCAPQ12770 1279 aa20.52■□□□□ 0.88
CHRD-216ENST00000486066 SLC14A1Q13336 389 aa20.52■□□□□ 0.88
CHRD-216ENST00000486066 SNX30Q5VWJ9 437 aa20.52■□□□□ 0.88
CHRD-216ENST00000486066 RABEPKQ7Z6M1 372 aa20.52■□□□□ 0.88
CHRD-216ENST00000486066 TERB1Q8NA31 727 aa20.52■□□□□ 0.88
CHRD-216ENST00000486066 GTPBP2Q9BX10 602 aaKnown RBP20.52■□□□□ 0.88
CHRD-216ENST00000486066 IL37Q9NZH6 218 aa20.52■□□□□ 0.88
CHRD-216ENST00000486066 TACC1O75410 805 aa20.51■□□□□ 0.87
CHRD-216ENST00000486066 PDGFRBP09619 1106 aa20.51■□□□□ 0.87
CHRD-216ENST00000486066 ANXA13P27216 316 aa20.51■□□□□ 0.87
CHRD-216ENST00000486066 GJB2P29033 226 aa20.51■□□□□ 0.87
CHRD-216ENST00000486066 CYP27A1Q02318 531 aa20.51■□□□□ 0.87
CHRD-216ENST00000486066 GAD2Q05329 585 aa20.51■□□□□ 0.87
CHRD-216ENST00000486066 MYO1EQ12965 1108 aa20.51■□□□□ 0.87
CHRD-216ENST00000486066 GPD1LQ8N335 351 aa20.51■□□□□ 0.87
CHRD-216ENST00000486066 ZNF513Q8N8E2 541 aaPredicted RBP20.51■□□□□ 0.87
CHRD-216ENST00000486066 WBP2Q969T9 261 aa20.51■□□□□ 0.87
CHRD-216ENST00000486066 ZNF419Q96HQ0 510 aaPredicted RBP20.51■□□□□ 0.87
CHRD-216ENST00000486066 CAMK1GQ96NX5 476 aa20.51■□□□□ 0.87
CHRD-216ENST00000486066 MRPL45Q9BRJ2 306 aaKnown RBP20.51■□□□□ 0.87
CHRD-216ENST00000486066 TBC1D7Q9P0N9 293 aa20.51■□□□□ 0.87
CHRD-216ENST00000486066 CIZ1Q9ULV3 898 aaPredicted RBP20.51■□□□□ 0.87
CHRD-216ENST00000486066 PCDHB13Q9Y5F0 798 aa20.51■□□□□ 0.87
CHRD-216ENST00000486066 TRIM24O15164 1050 aa20.5■□□□□ 0.87
CHRD-216ENST00000486066 COCHO43405 550 aa20.5■□□□□ 0.87
CHRD-216ENST00000486066 GREM1O60565 184 aa20.5■□□□□ 0.87
CHRD-216ENST00000486066 CBFA2T3O75081 653 aa20.5■□□□□ 0.87
CHRD-216ENST00000486066 GCNT3O95395 438 aa20.5■□□□□ 0.87
CHRD-216ENST00000486066 FAM163BP0C2L3 166 aa20.5■□□□□ 0.87
CHRD-216ENST00000486066 ZDHHC11BP0C7U3 371 aa20.5■□□□□ 0.87
CHRD-216ENST00000486066 ATXN3P54252 364 aaPredicted RBP20.5■□□□□ 0.87
CHRD-216ENST00000486066 ALCAMQ13740 583 aa20.5■□□□□ 0.87
CHRD-216ENST00000486066 SF3A1Q15459 793 aaKnown RBP20.5■□□□□ 0.87
CHRD-216ENST00000486066 MDH1BQ5I0G3 518 aa20.5■□□□□ 0.87
CHRD-216ENST00000486066 CCNI2Q6ZMN8 369 aaPredicted RBP20.5■□□□□ 0.87
CHRD-216ENST00000486066 TRMT11Q7Z4G4 463 aaKnown RBP20.5■□□□□ 0.87
CHRD-216ENST00000486066 DEFB119Q8N690 84 aa20.5■□□□□ 0.87
CHRD-216ENST00000486066 OVCA2Q8WZ82 227 aa20.5■□□□□ 0.87
CHRD-216ENST00000486066 ANKRD36BP1Q96IX9 119 aa20.5■□□□□ 0.87
CHRD-216ENST00000486066 GABRG3Q99928 467 aa20.5■□□□□ 0.87
CHRD-216ENST00000486066 ZNF518BQ9C0D4 1074 aa20.5■□□□□ 0.87
CHRD-216ENST00000486066 PCIF1Q9H4Z3 704 aa20.5■□□□□ 0.87
CHRD-216ENST00000486066 FAM92AA1XBS5 289 aa20.49■□□□□ 0.87
CHRD-216ENST00000486066 KIAA0391O15091 583 aaKnown RBP20.49■□□□□ 0.87
CHRD-216ENST00000486066 SH3BP5O60239 455 aa20.49■□□□□ 0.87
CHRD-216ENST00000486066 MBL2P11226 248 aaPredicted RBP20.49■□□□□ 0.87
CHRD-216ENST00000486066 HOXB2P14652 356 aa20.49■□□□□ 0.87
CHRD-216ENST00000486066 NDUFV2P19404 249 aa20.49■□□□□ 0.87
CHRD-216ENST00000486066 NTSR1P30989 418 aa20.49■□□□□ 0.87
CHRD-216ENST00000486066 TRIP6Q15654 476 aaKnown RBP20.49■□□□□ 0.87
CHRD-216ENST00000486066 TDRD10Q5VZ19 366 aaKnown RBP20.49■□□□□ 0.87
CHRD-216ENST00000486066 GLRX5Q86SX6 157 aa20.49■□□□□ 0.87
CHRD-216ENST00000486066 PDZD3Q86UT5 571 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms