RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 SCUBE3Q8IX30 993 aa16.66■□□□□ 0.26
APOE-205ENST00000485628 ZNF276Q8N554 614 aa16.66■□□□□ 0.26
APOE-205ENST00000485628 STKLD1Q8NE28 680 aa16.66■□□□□ 0.26
APOE-205ENST00000485628 FEZF2Q8TBJ5 459 aa16.66■□□□□ 0.26
APOE-205ENST00000485628 GPR152Q8TDT2 470 aa16.66■□□□□ 0.26
APOE-205ENST00000485628 IRGQQ8WZA9 623 aa16.66■□□□□ 0.26
APOE-205ENST00000485628 CASP10Q92851 521 aa16.66■□□□□ 0.26
APOE-205ENST00000485628 PIWIL1Q96J94 861 aaKnown RBP16.66■□□□□ 0.26
APOE-205ENST00000485628 CDX2Q99626 313 aaPredicted RBP16.66■□□□□ 0.26
APOE-205ENST00000485628 PRKD2Q9BZL6 878 aa16.66■□□□□ 0.26
APOE-205ENST00000485628 MIS12Q9H081 205 aa16.66■□□□□ 0.26
APOE-205ENST00000485628 THAP2Q9H0W7 228 aa16.66■□□□□ 0.26
APOE-205ENST00000485628 FBXO44Q9H4M3 255 aa16.66■□□□□ 0.26
APOE-205ENST00000485628 BRWD1Q9NSI6 2320 aa16.66■□□□□ 0.26
APOE-205ENST00000485628 SEPT11Q9NVA2 429 aaKnown RBP16.66■□□□□ 0.26
APOE-205ENST00000485628 ASNSD1Q9NWL6 643 aa16.66■□□□□ 0.26
APOE-205ENST00000485628 MTMR10Q9NXD2 777 aa16.66■□□□□ 0.26
APOE-205ENST00000485628 CLEC1BQ9P126 229 aa16.66■□□□□ 0.26
APOE-205ENST00000485628 WDR35Q9P2L0 1181 aa16.66■□□□□ 0.26
APOE-205ENST00000485628 TMEM59LQ9UK28 342 aa16.66■□□□□ 0.26
APOE-205ENST00000485628 OBSL1O75147 1896 aa16.65■□□□□ 0.26
APOE-205ENST00000485628 BTNL10A8MVZ5 291 aa16.65■□□□□ 0.26
APOE-205ENST00000485628 LINC01565O15544 149 aa16.65■□□□□ 0.26
APOE-205ENST00000485628 NCK2O43639 380 aa16.65■□□□□ 0.26
APOE-205ENST00000485628 RFPL2O75678 378 aa16.65■□□□□ 0.26
APOE-205ENST00000485628 F11P03951 625 aa16.65■□□□□ 0.26
APOE-205ENST00000485628 FYNP06241 537 aa16.65■□□□□ 0.26
APOE-205ENST00000485628 H2AFZP0C0S5 128 aa16.65■□□□□ 0.26
APOE-205ENST00000485628 TMEM253P0C7T8 217 aa16.65■□□□□ 0.26
APOE-205ENST00000485628 EPHB3P54753 998 aa16.65■□□□□ 0.26
APOE-205ENST00000485628 SNX16P57768 344 aa16.65■□□□□ 0.26
APOE-205ENST00000485628 SLC6A3Q01959 620 aa16.65■□□□□ 0.26
APOE-205ENST00000485628 ADIGQ0VDE8 80 aa16.65■□□□□ 0.26
APOE-205ENST00000485628 LIN9Q5TKA1 542 aa16.65■□□□□ 0.26
APOE-205ENST00000485628 SYCE2Q6PIF2 218 aa16.65■□□□□ 0.26
APOE-205ENST00000485628 H2AFVQ71UI9 128 aa16.65■□□□□ 0.26
APOE-205ENST00000485628 Q7L0L9 218 aa16.65■□□□□ 0.26
APOE-205ENST00000485628 SLC26A9Q7LBE3 791 aa16.65■□□□□ 0.26
APOE-205ENST00000485628 SCD5Q86SK9 330 aa16.65■□□□□ 0.26
APOE-205ENST00000485628 C3orf20Q8ND61 904 aa16.65■□□□□ 0.26
APOE-205ENST00000485628 ACRBPQ8NEB7 543 aa16.65■□□□□ 0.26
APOE-205ENST00000485628 GIPC2Q8TF65 315 aa16.65■□□□□ 0.26
APOE-205ENST00000485628 CLEC4CQ8WTT0 213 aa16.65■□□□□ 0.26
APOE-205ENST00000485628 OVCA2Q8WZ82 227 aa16.65■□□□□ 0.26
APOE-205ENST00000485628 C11orf70Q9BRQ4 267 aa16.65■□□□□ 0.26
APOE-205ENST00000485628 ULBP1Q9BZM6 244 aa16.65■□□□□ 0.26
APOE-205ENST00000485628 LRRC4Q9HBW1 653 aa16.65■□□□□ 0.26
APOE-205ENST00000485628 KCND1Q9NSA2 647 aa16.65■□□□□ 0.26
APOE-205ENST00000485628 DZANK1Q9NVP4 752 aa16.65■□□□□ 0.26
APOE-205ENST00000485628 STRIP2Q9ULQ0 834 aa16.65■□□□□ 0.26
APOE-205ENST00000485628 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.65■□□□□ 0.26
APOE-205ENST00000485628 C2orf16Q68DN1 1984 aa16.64■□□□□ 0.25
APOE-205ENST00000485628 TMCO5BA8MYB1 307 aa16.64■□□□□ 0.25
APOE-205ENST00000485628 TADA3O75528 432 aa16.64■□□□□ 0.25
APOE-205ENST00000485628 ZBED1O96006 694 aa16.64■□□□□ 0.25
APOE-205ENST00000485628 GLI1P08151 1106 aa16.64■□□□□ 0.25
APOE-205ENST00000485628 RRM1P23921 792 aa16.64■□□□□ 0.25
APOE-205ENST00000485628 YWHAQP27348 245 aa16.64■□□□□ 0.25
APOE-205ENST00000485628 MAGEA1P43355 309 aa16.64■□□□□ 0.25
APOE-205ENST00000485628 VAV2P52735 878 aa16.64■□□□□ 0.25
APOE-205ENST00000485628 GPC5P78333 572 aa16.64■□□□□ 0.25
APOE-205ENST00000485628 KRT83P78385 493 aa16.64■□□□□ 0.25
APOE-205ENST00000485628 MAMLD1Q13495 774 aa16.64■□□□□ 0.25
APOE-205ENST00000485628 PPM1LQ5SGD2 360 aa16.64■□□□□ 0.25
APOE-205ENST00000485628 CYP4A22Q5TCH4 519 aa16.64■□□□□ 0.25
APOE-205ENST00000485628 ANKRD54Q6NXT1 300 aa16.64■□□□□ 0.25
APOE-205ENST00000485628 LLGL2Q6P1M3 1020 aa16.64■□□□□ 0.25
APOE-205ENST00000485628 FAM183BPQ6ZVS7 135 aa16.64■□□□□ 0.25
APOE-205ENST00000485628 MSANTD4Q8NCY6 345 aa16.64■□□□□ 0.25
APOE-205ENST00000485628 NDRG1Q92597 394 aaKnown RBP16.64■□□□□ 0.25
APOE-205ENST00000485628 ARHGEF26Q96DR7 871 aa16.64■□□□□ 0.25
APOE-205ENST00000485628 TRIM11Q96F44 468 aa16.64■□□□□ 0.25
APOE-205ENST00000485628 MSLNLQ96KJ4 702 aa16.64■□□□□ 0.25
APOE-205ENST00000485628 FAM161BQ96MY7 647 aa16.64■□□□□ 0.25
APOE-205ENST00000485628 LACRTQ9GZZ8 138 aa16.64■□□□□ 0.25
APOE-205ENST00000485628 S1PR5Q9H228 398 aa16.64■□□□□ 0.25
APOE-205ENST00000485628 ZNF334Q9HCZ1 680 aaPredicted RBP16.64■□□□□ 0.25
APOE-205ENST00000485628 ST7Q9NRC1 585 aa16.64■□□□□ 0.25
APOE-205ENST00000485628 DNMT3BQ9UBC3 853 aaKnown RBP16.64■□□□□ 0.25
APOE-205ENST00000485628 MYO16Q9Y6X6 1858 aa16.63■□□□□ 0.25
APOE-205ENST00000485628 A0A0A6YYK5 440 aaPredicted RBP16.63■□□□□ 0.25
APOE-205ENST00000485628 A0A0U1RQJ8 604 aa16.63■□□□□ 0.25
APOE-205ENST00000485628 CCDC195A0A1B0GUA6 201 aa16.63■□□□□ 0.25
APOE-205ENST00000485628 SIGLEC16A6NMB1 481 aa16.63■□□□□ 0.25
APOE-205ENST00000485628 YJEFN3A6XGL0 299 aa16.63■□□□□ 0.25
APOE-205ENST00000485628 E7ENQ6 273 aa16.63■□□□□ 0.25
APOE-205ENST00000485628 PIK3R2O00459 728 aa16.63■□□□□ 0.25
APOE-205ENST00000485628 NRG2O14511 850 aaPredicted RBP16.63■□□□□ 0.25
APOE-205ENST00000485628 MTA2O94776 668 aa16.63■□□□□ 0.25
APOE-205ENST00000485628 USP17L7P0C7H9 530 aa16.63■□□□□ 0.25
APOE-205ENST00000485628 LCP1P13796 627 aa16.63■□□□□ 0.25
APOE-205ENST00000485628 HOXB8P17481 243 aaPredicted RBP16.63■□□□□ 0.25
APOE-205ENST00000485628 HADHBP55084 474 aaKnown RBP16.63■□□□□ 0.25
APOE-205ENST00000485628 SPA17Q15506 151 aa16.63■□□□□ 0.25
APOE-205ENST00000485628 TRNP1Q6NT89 227 aa16.63■□□□□ 0.25
APOE-205ENST00000485628 GAREM2Q75VX8 874 aa16.63■□□□□ 0.25
APOE-205ENST00000485628 BNIPLQ7Z465 357 aa16.63■□□□□ 0.25
APOE-205ENST00000485628 ITIH5Q86UX2 942 aa16.63■□□□□ 0.25
APOE-205ENST00000485628 MON1AQ86VX9 555 aa16.63■□□□□ 0.25
APOE-205ENST00000485628 IPO4Q8TEX9 1081 aaKnown RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms