RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 DDX1Q92499 740 aaKnown RBP20.43■□□□□ 0.86
COL27A1-205ENST00000485397 DMAC2Q9NW81 257 aa20.43■□□□□ 0.86
COL27A1-205ENST00000485397 MMP17Q9ULZ9 603 aa20.43■□□□□ 0.86
COL27A1-205ENST00000485397 COCHO43405 550 aa20.42■□□□□ 0.86
COL27A1-205ENST00000485397 AP3M2P53677 418 aa20.42■□□□□ 0.86
COL27A1-205ENST00000485397 DLG4P78352 724 aa20.42■□□□□ 0.86
COL27A1-205ENST00000485397 CLDN10P78369 228 aa20.42■□□□□ 0.86
COL27A1-205ENST00000485397 DNM1Q05193 864 aaKnown RBP20.42■□□□□ 0.86
COL27A1-205ENST00000485397 RASSF3Q86WH2 238 aa20.42■□□□□ 0.86
COL27A1-205ENST00000485397 TTC30AQ86WT1 665 aa20.42■□□□□ 0.86
COL27A1-205ENST00000485397 PDZD8Q8NEN9 1154 aa20.42■□□□□ 0.86
COL27A1-205ENST00000485397 PAGE5Q96GU1 130 aa20.42■□□□□ 0.86
COL27A1-205ENST00000485397 ZFRQ96KR1 1074 aaKnown RBP20.42■□□□□ 0.86
COL27A1-205ENST00000485397 PNKPQ96T60 521 aa20.42■□□□□ 0.86
COL27A1-205ENST00000485397 CNOT1A5YKK6 2376 aaKnown RBP20.42■□□□□ 0.86
COL27A1-205ENST00000485397 BCLAF3A2AJT9 711 aaKnown RBP20.41■□□□□ 0.86
COL27A1-205ENST00000485397 TNFRSF10BO14763 440 aa20.41■□□□□ 0.86
COL27A1-205ENST00000485397 ACTN4O43707 911 aaKnown RBP20.41■□□□□ 0.86
COL27A1-205ENST00000485397 KAT7O95251 611 aa20.41■□□□□ 0.86
COL27A1-205ENST00000485397 CAVIN2O95810 425 aa20.41■□□□□ 0.86
COL27A1-205ENST00000485397 HSP90AA1P07900 732 aaKnown RBP20.41■□□□□ 0.86
COL27A1-205ENST00000485397 SLFN14P0C7P3 912 aa20.41■□□□□ 0.86
COL27A1-205ENST00000485397 CHRM1P11229 460 aaPredicted RBP20.41■□□□□ 0.86
COL27A1-205ENST00000485397 BCKDHBP21953 392 aa20.41■□□□□ 0.86
COL27A1-205ENST00000485397 SLC5A3P53794 718 aa20.41■□□□□ 0.86
COL27A1-205ENST00000485397 MRPS21P82921 87 aaKnown RBP20.41■□□□□ 0.86
COL27A1-205ENST00000485397 ORC1Q13415 861 aa20.41■□□□□ 0.86
COL27A1-205ENST00000485397 CRY1Q16526 586 aa20.41■□□□□ 0.86
COL27A1-205ENST00000485397 KMT5BQ4FZB7 885 aa20.41■□□□□ 0.86
COL27A1-205ENST00000485397 USP39Q53GS9 565 aaKnown RBP20.41■□□□□ 0.86
COL27A1-205ENST00000485397 LY6G5CQ5SRR4 150 aa20.41■□□□□ 0.86
COL27A1-205ENST00000485397 HECTD3Q5T447 861 aa20.41■□□□□ 0.86
COL27A1-205ENST00000485397 EMC10Q5UCC4 262 aa20.41■□□□□ 0.86
COL27A1-205ENST00000485397 TMEM92Q6UXU6 159 aa20.41■□□□□ 0.86
COL27A1-205ENST00000485397 ACOT1Q86TX2 421 aa20.41■□□□□ 0.86
COL27A1-205ENST00000485397 DDX42Q86XP3 938 aaKnown RBP eCLIP20.41■□□□□ 0.86
COL27A1-205ENST00000485397 HSCBQ8IWL3 235 aa20.41■□□□□ 0.86
COL27A1-205ENST00000485397 FUKQ8N0W3 1084 aa20.41■□□□□ 0.86
COL27A1-205ENST00000485397 ALLCQ8N6M5 410 aa20.41■□□□□ 0.86
COL27A1-205ENST00000485397 SPRYD3Q8NCJ5 442 aa20.41■□□□□ 0.86
COL27A1-205ENST00000485397 MDGA1Q8NFP4 955 aa20.41■□□□□ 0.86
COL27A1-205ENST00000485397 OVCA2Q8WZ82 227 aa20.41■□□□□ 0.86
COL27A1-205ENST00000485397 CNOT6LQ96LI5 555 aaKnown RBP20.41■□□□□ 0.86
COL27A1-205ENST00000485397 CCSER2Q9H7U1 834 aa20.41■□□□□ 0.86
COL27A1-205ENST00000485397 DMAP1Q9NPF5 467 aaPredicted RBP20.41■□□□□ 0.86
COL27A1-205ENST00000485397 EXOC1Q9NV70 894 aa20.41■□□□□ 0.86
COL27A1-205ENST00000485397 IL37Q9NZH6 218 aa20.41■□□□□ 0.86
COL27A1-205ENST00000485397 RCOR1Q9UKL0 485 aa20.41■□□□□ 0.86
COL27A1-205ENST00000485397 ATP8B3O60423 1300 aa20.41■□□□□ 0.86
COL27A1-205ENST00000485397 ABCA7Q8IZY2 2146 aa20.41■□□□□ 0.86
COL27A1-205ENST00000485397 ACACBO00763 2458 aa20.41■□□□□ 0.86
COL27A1-205ENST00000485397 AP1G2O75843 785 aa20.4■□□□□ 0.86
COL27A1-205ENST00000485397 ADH1CP00326 375 aa20.4■□□□□ 0.86
COL27A1-205ENST00000485397 APODP05090 189 aa20.4■□□□□ 0.86
COL27A1-205ENST00000485397 ADH5P11766 374 aa20.4■□□□□ 0.86
COL27A1-205ENST00000485397 PDIA4P13667 645 aaKnown RBP20.4■□□□□ 0.86
COL27A1-205ENST00000485397 TIE1P35590 1138 aa20.4■□□□□ 0.86
COL27A1-205ENST00000485397 KDSRQ06136 332 aa20.4■□□□□ 0.86
COL27A1-205ENST00000485397 N4BP2L1Q5TBK1 243 aaPredicted RBP20.4■□□□□ 0.86
COL27A1-205ENST00000485397 PMS2CLQ68D20 193 aa20.4■□□□□ 0.86
COL27A1-205ENST00000485397 RNF43Q68DV7 783 aa20.4■□□□□ 0.86
COL27A1-205ENST00000485397 ATL3Q6DD88 541 aa20.4■□□□□ 0.86
COL27A1-205ENST00000485397 SLC9A9Q8IVB4 645 aa20.4■□□□□ 0.86
COL27A1-205ENST00000485397 IL17RCQ8NAC3 791 aa20.4■□□□□ 0.86
COL27A1-205ENST00000485397 TXNDC5Q8NBS9 432 aaKnown RBP20.4■□□□□ 0.86
COL27A1-205ENST00000485397 ZMIZ2Q8NF64 920 aa20.4■□□□□ 0.86
COL27A1-205ENST00000485397 WBP2Q969T9 261 aa20.4■□□□□ 0.86
COL27A1-205ENST00000485397 SMARCD1Q96GM5 515 aa20.4■□□□□ 0.86
COL27A1-205ENST00000485397 TNIP3Q96KP6 325 aa20.4■□□□□ 0.86
COL27A1-205ENST00000485397 SMOQ99835 787 aa20.4■□□□□ 0.86
COL27A1-205ENST00000485397 KCTD10Q9H3F6 313 aa20.4■□□□□ 0.86
COL27A1-205ENST00000485397 ZDHHC4Q9NPG8 344 aa20.4■□□□□ 0.86
COL27A1-205ENST00000485397 ARHGEF4Q9NR80 690 aa20.4■□□□□ 0.86
COL27A1-205ENST00000485397 KRT82Q9NSB4 513 aa20.4■□□□□ 0.86
COL27A1-205ENST00000485397 MYOFQ9NZM1 2061 aa20.4■□□□□ 0.86
COL27A1-205ENST00000485397 GMIPQ9P107 970 aa20.4■□□□□ 0.86
COL27A1-205ENST00000485397 TBC1D14Q9P2M4 693 aa20.4■□□□□ 0.86
COL27A1-205ENST00000485397 CFAP45Q9UL16 551 aa20.4■□□□□ 0.86
COL27A1-205ENST00000485397 E2F8A0AVK6 867 aa20.39■□□□□ 0.85
COL27A1-205ENST00000485397 SGK1O00141 431 aa20.39■□□□□ 0.85
COL27A1-205ENST00000485397 KRT37O76014 449 aa20.39■□□□□ 0.85
COL27A1-205ENST00000485397 BEST1O76090 585 aa20.39■□□□□ 0.85
COL27A1-205ENST00000485397 KLF8O95600 359 aaPredicted RBP20.39■□□□□ 0.85
COL27A1-205ENST00000485397 CCDC130P13994 396 aa20.39■□□□□ 0.85
COL27A1-205ENST00000485397 EIF2DP41214 584 aaKnown RBP20.39■□□□□ 0.85
COL27A1-205ENST00000485397 PGFP49763 221 aa20.39■□□□□ 0.85
COL27A1-205ENST00000485397 SNX30Q5VWJ9 437 aa20.39■□□□□ 0.85
COL27A1-205ENST00000485397 HMGXB4Q9UGU5 601 aa20.39■□□□□ 0.85
COL27A1-205ENST00000485397 SH3BP1Q9Y3L3 701 aa20.39■□□□□ 0.85
COL27A1-205ENST00000485397 CACNA1BQ00975 2339 aa20.39■□□□□ 0.85
COL27A1-205ENST00000485397 A0A0A0MRY4 1105 aa20.38■□□□□ 0.85
COL27A1-205ENST00000485397 A0A1B0GVL5 298 aa20.38■□□□□ 0.85
COL27A1-205ENST00000485397 NR3C1P04150 777 aa20.38■□□□□ 0.85
COL27A1-205ENST00000485397 ZDHHC11BP0C7U3 371 aa20.38■□□□□ 0.85
COL27A1-205ENST00000485397 GRIA2P42262 883 aa20.38■□□□□ 0.85
COL27A1-205ENST00000485397 KIR2DL1P43626 348 aaPredicted RBP20.38■□□□□ 0.85
COL27A1-205ENST00000485397 NDST1P52848 882 aa20.38■□□□□ 0.85
COL27A1-205ENST00000485397 SGSM1Q2NKQ1 1148 aa20.38■□□□□ 0.85
COL27A1-205ENST00000485397 ZACNQ401N2 412 aa20.38■□□□□ 0.85
COL27A1-205ENST00000485397 SPOPLQ6IQ16 392 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms