RNA–Protein interactions for RNA: ENST00000485363.1

SIK3-211, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-211ENST00000485363 FILIP1Q7Z7B0 1213 aa16.83■□□□□ 0.28
SIK3-211ENST00000485363 GSDMAQ96QA5 445 aa16.83■□□□□ 0.28
SIK3-211ENST00000485363 DNAI2Q9GZS0 605 aa16.83■□□□□ 0.28
SIK3-211ENST00000485363 NIF3L1Q9GZT8 377 aa16.83■□□□□ 0.28
SIK3-211ENST00000485363 CSNK1G1Q9HCP0 422 aa16.83■□□□□ 0.28
SIK3-211ENST00000485363 FAM49BQ9NUQ9 324 aa16.83■□□□□ 0.28
SIK3-211ENST00000485363 IL37Q9NZH6 218 aa16.83■□□□□ 0.28
SIK3-211ENST00000485363 CFAP97Q9P2B7 532 aa16.83■□□□□ 0.28
SIK3-211ENST00000485363 CHORDC1Q9UHD1 332 aaPredicted RBP16.83■□□□□ 0.28
SIK3-211ENST00000485363 FAM92AA1XBS5 289 aa16.82■□□□□ 0.28
SIK3-211ENST00000485363 CETN3O15182 167 aa16.82■□□□□ 0.28
SIK3-211ENST00000485363 STX10O60499 249 aa16.82■□□□□ 0.28
SIK3-211ENST00000485363 FAM200BP0CF97 657 aa16.82■□□□□ 0.28
SIK3-211ENST00000485363 EPB41P11171 864 aaKnown RBP16.82■□□□□ 0.28
SIK3-211ENST00000485363 TUBP50607 506 aa16.82■□□□□ 0.28
SIK3-211ENST00000485363 MAP3K7CLP57077 242 aa16.82■□□□□ 0.28
SIK3-211ENST00000485363 MCCD1P59942 119 aaPredicted RBP16.82■□□□□ 0.28
SIK3-211ENST00000485363 LPAL2Q16609 132 aa16.82■□□□□ 0.28
SIK3-211ENST00000485363 ZNF658Q5TYW1 1059 aaPredicted RBP16.82■□□□□ 0.28
SIK3-211ENST00000485363 SNX30Q5VWJ9 437 aa16.82■□□□□ 0.28
SIK3-211ENST00000485363 KRT39Q6A163 491 aa16.82■□□□□ 0.28
SIK3-211ENST00000485363 WDR5BQ86VZ2 330 aa16.82■□□□□ 0.28
SIK3-211ENST00000485363 C12orf29Q8N999 325 aa16.82■□□□□ 0.28
SIK3-211ENST00000485363 ZMIZ2Q8NF64 920 aa16.82■□□□□ 0.28
SIK3-211ENST00000485363 CCDC26Q8TAB7 109 aa16.82■□□□□ 0.28
SIK3-211ENST00000485363 SMOQ99835 787 aa16.82■□□□□ 0.28
SIK3-211ENST00000485363 NT5C1AQ9BXI3 368 aa16.82■□□□□ 0.28
SIK3-211ENST00000485363 FBXO44Q9H4M3 255 aa16.82■□□□□ 0.28
SIK3-211ENST00000485363 APOBEC3GQ9HC16 384 aaKnown RBP16.82■□□□□ 0.28
SIK3-211ENST00000485363 MYO16Q9Y6X6 1858 aa16.82■□□□□ 0.28
SIK3-211ENST00000485363 CCDC163A0A0D9SF12 145 aa16.81■□□□□ 0.28
SIK3-211ENST00000485363 COCHO43405 550 aa16.81■□□□□ 0.28
SIK3-211ENST00000485363 BEST1O76090 585 aa16.81■□□□□ 0.28
SIK3-211ENST00000485363 SMC2O95347 1197 aa16.81■□□□□ 0.28
SIK3-211ENST00000485363 ZDHHC11BP0C7U3 371 aa16.81■□□□□ 0.28
SIK3-211ENST00000485363 ADORA2BP29275 332 aa16.81■□□□□ 0.28
SIK3-211ENST00000485363 FOXK2Q01167 660 aa16.81■□□□□ 0.28
SIK3-211ENST00000485363 SRSF5Q13243 272 aaKnown RBP16.81■□□□□ 0.28
SIK3-211ENST00000485363 COBLL1Q53SF7 1204 aa16.81■□□□□ 0.28
SIK3-211ENST00000485363 CEP68Q76N32 757 aa16.81■□□□□ 0.28
SIK3-211ENST00000485363 ADGRG2Q8IZP9 1017 aa16.81■□□□□ 0.28
SIK3-211ENST00000485363 ENGASEQ8NFI3 743 aa16.81■□□□□ 0.28
SIK3-211ENST00000485363 RPLP0P6Q8NHW5 317 aa16.81■□□□□ 0.28
SIK3-211ENST00000485363 RMDN1Q96DB5 314 aa16.81■□□□□ 0.28
SIK3-211ENST00000485363 CYFIP2Q96F07 1278 aa16.81■□□□□ 0.28
SIK3-211ENST00000485363 EEF2KMTQ96G04 330 aa16.81■□□□□ 0.28
SIK3-211ENST00000485363 TWNKQ96RR1 684 aa16.81■□□□□ 0.28
SIK3-211ENST00000485363 HNRNPABQ99729 332 aaKnown RBP16.81■□□□□ 0.28
SIK3-211ENST00000485363 TSG101Q99816 390 aa16.81■□□□□ 0.28
SIK3-211ENST00000485363 GTPBP4Q9BZE4 634 aaKnown RBP16.81■□□□□ 0.28
SIK3-211ENST00000485363 GMIPQ9P107 970 aa16.81■□□□□ 0.28
SIK3-211ENST00000485363 TBC1D14Q9P2M4 693 aa16.81■□□□□ 0.28
SIK3-211ENST00000485363 HOOK1Q9UJC3 728 aaKnown RBP16.81■□□□□ 0.28
SIK3-211ENST00000485363 KIAA1549LQ6ZVL6 1849 aa16.8■□□□□ 0.28
SIK3-211ENST00000485363 E2F8A0AVK6 867 aa16.8■□□□□ 0.28
SIK3-211ENST00000485363 CILPO75339 1184 aa16.8■□□□□ 0.28
SIK3-211ENST00000485363 CYP17A1P05093 508 aa16.8■□□□□ 0.28
SIK3-211ENST00000485363 RETP07949 1114 aa16.8■□□□□ 0.28
SIK3-211ENST00000485363 CD58P19256 250 aa16.8■□□□□ 0.28
SIK3-211ENST00000485363 HOXC13P31276 330 aa16.8■□□□□ 0.28
SIK3-211ENST00000485363 PRCPP42785 496 aa16.8■□□□□ 0.28
SIK3-211ENST00000485363 MXI1P50539 228 aa16.8■□□□□ 0.28
SIK3-211ENST00000485363 DHCR24Q15392 516 aa16.8■□□□□ 0.28
SIK3-211ENST00000485363 ERMP1Q7Z2K6 904 aa16.8■□□□□ 0.28
SIK3-211ENST00000485363 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.8■□□□□ 0.28
SIK3-211ENST00000485363 CAMKK1Q8N5S9 505 aa16.8■□□□□ 0.28
SIK3-211ENST00000485363 EZH1Q92800 747 aaPredicted RBP16.8■□□□□ 0.28
SIK3-211ENST00000485363 SMARCE1Q969G3 411 aa16.8■□□□□ 0.28
SIK3-211ENST00000485363 ACDQ96AP0 544 aa16.8■□□□□ 0.28
SIK3-211ENST00000485363 FAXDC2Q96IV6 333 aa16.8■□□□□ 0.28
SIK3-211ENST00000485363 TIGD1Q96MW7 591 aa16.8■□□□□ 0.28
SIK3-211ENST00000485363 NACA2Q9H009 215 aa16.8■□□□□ 0.28
SIK3-211ENST00000485363 CCSER2Q9H7U1 834 aa16.8■□□□□ 0.28
SIK3-211ENST00000485363 TLR8Q9NR97 1041 aaKnown RBP16.8■□□□□ 0.28
SIK3-211ENST00000485363 USP18Q9UMW8 372 aa16.8■□□□□ 0.28
SIK3-211ENST00000485363 SH3BP1Q9Y3L3 701 aa16.8■□□□□ 0.28
SIK3-211ENST00000485363 SCAMP3O14828 347 aaKnown RBP16.79■□□□□ 0.28
SIK3-211ENST00000485363 ADH1CP00326 375 aa16.79■□□□□ 0.28
SIK3-211ENST00000485363 OPRD1P41143 372 aa16.79■□□□□ 0.28
SIK3-211ENST00000485363 PXNP49023 591 aaPredicted RBP16.79■□□□□ 0.28
SIK3-211ENST00000485363 LMNB2Q03252 620 aa16.79■□□□□ 0.28
SIK3-211ENST00000485363 CLEC20AQ6ZU45 233 aa16.79■□□□□ 0.28
SIK3-211ENST00000485363 SYT13Q7L8C5 426 aa16.79■□□□□ 0.28
SIK3-211ENST00000485363 TTC39CQ8N584 583 aa16.79■□□□□ 0.28
SIK3-211ENST00000485363 FBXL13Q8NEE6 735 aa16.79■□□□□ 0.28
SIK3-211ENST00000485363 SPATA20Q8TB22 786 aa16.79■□□□□ 0.28
SIK3-211ENST00000485363 OTUB2Q96DC9 234 aa16.79■□□□□ 0.28
SIK3-211ENST00000485363 ZFRQ96KR1 1074 aaKnown RBP16.79■□□□□ 0.28
SIK3-211ENST00000485363 PNPLA8Q9NP80 782 aa16.79■□□□□ 0.28
SIK3-211ENST00000485363 RAB20Q9NX57 234 aa16.79■□□□□ 0.28
SIK3-211ENST00000485363 PCDHA5Q9Y5H7 936 aa16.79■□□□□ 0.28
SIK3-211ENST00000485363 CEP250Q9BV73 2442 aa16.79■□□□□ 0.28
SIK3-211ENST00000485363 MYOFQ9NZM1 2061 aa16.79■□□□□ 0.28
SIK3-211ENST00000485363 RALGAPA1Q6GYQ0 2036 aa16.79■□□□□ 0.28
SIK3-211ENST00000485363 SLC16A3O15427 465 aaKnown RBP16.78■□□□□ 0.28
SIK3-211ENST00000485363 TLR5O60602 858 aa16.78■□□□□ 0.28
SIK3-211ENST00000485363 LRP3O75074 770 aa16.78■□□□□ 0.28
SIK3-211ENST00000485363 SDHBP21912 280 aa16.78■□□□□ 0.28
SIK3-211ENST00000485363 FKBP3Q00688 224 aaKnown RBP16.78■□□□□ 0.28
SIK3-211ENST00000485363 SPEM2Q0P670 501 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms