RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 LINC00597Q9H2U6 94 aa13.65□□□□□ -0.22
HDAC1-209ENST00000484305 CHRDQ9H2X0 955 aa13.65□□□□□ -0.22
HDAC1-209ENST00000484305 COMMD8Q9NX08 183 aa13.65□□□□□ -0.22
HDAC1-209ENST00000484305 DUS2Q9NX74 493 aaKnown RBP13.65□□□□□ -0.22
HDAC1-209ENST00000484305 SMPD4Q9NXE4 827 aa13.65□□□□□ -0.22
HDAC1-209ENST00000484305 GMIPQ9P107 970 aa13.65□□□□□ -0.22
HDAC1-209ENST00000484305 WNT6Q9Y6F9 365 aa13.65□□□□□ -0.22
HDAC1-209ENST00000484305 MYOFQ9NZM1 2061 aa13.65□□□□□ -0.22
HDAC1-209ENST00000484305 USP34Q70CQ2 3546 aa13.64□□□□□ -0.23
HDAC1-209ENST00000484305 VPS13AQ96RL7 3174 aa13.64□□□□□ -0.23
HDAC1-209ENST00000484305 COCHO43405 550 aa13.64□□□□□ -0.23
HDAC1-209ENST00000484305 ZDHHC11BP0C7U3 371 aa13.64□□□□□ -0.23
HDAC1-209ENST00000484305 CSTF1Q05048 431 aaKnown RBP13.64□□□□□ -0.23
HDAC1-209ENST00000484305 CUL2Q13617 745 aa13.64□□□□□ -0.23
HDAC1-209ENST00000484305 GAS6Q14393 721 aa13.64□□□□□ -0.23
HDAC1-209ENST00000484305 EML3Q32P44 896 aa13.64□□□□□ -0.23
HDAC1-209ENST00000484305 SNX30Q5VWJ9 437 aa13.64□□□□□ -0.23
HDAC1-209ENST00000484305 TTC39CQ8N584 583 aa13.64□□□□□ -0.23
HDAC1-209ENST00000484305 TMEM176AQ96HP8 235 aa13.64□□□□□ -0.23
HDAC1-209ENST00000484305 DNAI2Q9GZS0 605 aa13.64□□□□□ -0.23
HDAC1-209ENST00000484305 CCSER2Q9H7U1 834 aa13.64□□□□□ -0.23
HDAC1-209ENST00000484305 ECT2Q9H8V3 914 aa13.64□□□□□ -0.23
HDAC1-209ENST00000484305 FBXO4Q9UKT5 387 aa13.64□□□□□ -0.23
HDAC1-209ENST00000484305 CPQQ9Y646 472 aa13.64□□□□□ -0.23
HDAC1-209ENST00000484305 R4GN57 208 aa13.64□□□□□ -0.23
HDAC1-209ENST00000484305 PMM2O15305 246 aa13.63□□□□□ -0.23
HDAC1-209ENST00000484305 MBL2P11226 248 aaPredicted RBP13.63□□□□□ -0.23
HDAC1-209ENST00000484305 GJA4P35212 333 aa13.63□□□□□ -0.23
HDAC1-209ENST00000484305 IFNAR2P48551 515 aa13.63□□□□□ -0.23
HDAC1-209ENST00000484305 MARSP56192 900 aaKnown RBP13.63□□□□□ -0.23
HDAC1-209ENST00000484305 CCINQ13939 588 aa13.63□□□□□ -0.23
HDAC1-209ENST00000484305 HECTD3Q5T447 861 aa13.63□□□□□ -0.23
HDAC1-209ENST00000484305 NAIF1Q69YI7 327 aaPredicted RBP13.63□□□□□ -0.23
HDAC1-209ENST00000484305 TSSK4Q6SA08 328 aa13.63□□□□□ -0.23
HDAC1-209ENST00000484305 CLEC17AQ6ZS10 378 aa13.63□□□□□ -0.23
HDAC1-209ENST00000484305 TRIM59Q8IWR1 403 aa13.63□□□□□ -0.23
HDAC1-209ENST00000484305 CPA6Q8N4T0 437 aa13.63□□□□□ -0.23
HDAC1-209ENST00000484305 LMO3Q8TAP4 145 aa13.63□□□□□ -0.23
HDAC1-209ENST00000484305 ATP2A3Q93084 1043 aa13.63□□□□□ -0.23
HDAC1-209ENST00000484305 ZFRQ96KR1 1074 aaKnown RBP13.63□□□□□ -0.23
HDAC1-209ENST00000484305 MED15Q96RN5 788 aa13.63□□□□□ -0.23
HDAC1-209ENST00000484305 DUSP16Q9BY84 665 aa13.63□□□□□ -0.23
HDAC1-209ENST00000484305 CLSTN2Q9H4D0 955 aa13.63□□□□□ -0.23
HDAC1-209ENST00000484305 FBXO44Q9H4M3 255 aa13.63□□□□□ -0.23
HDAC1-209ENST00000484305 FAM124BQ9H5Z6 455 aaPredicted RBP13.63□□□□□ -0.23
HDAC1-209ENST00000484305 TRDMT1O14717 391 aaKnown RBP13.62□□□□□ -0.23
HDAC1-209ENST00000484305 SCAMP3O14828 347 aaKnown RBP13.62□□□□□ -0.23
HDAC1-209ENST00000484305 CYP26A1O43174 497 aa13.62□□□□□ -0.23
HDAC1-209ENST00000484305 GFRA3O60609 400 aa13.62□□□□□ -0.23
HDAC1-209ENST00000484305 GNA14O95837 355 aa13.62□□□□□ -0.23
HDAC1-209ENST00000484305 ACO1P21399 889 aaKnown RBP13.62□□□□□ -0.23
HDAC1-209ENST00000484305 TUBP50607 506 aa13.62□□□□□ -0.23
HDAC1-209ENST00000484305 GALK1P51570 392 aa13.62□□□□□ -0.23
HDAC1-209ENST00000484305 KCNH2Q12809 1159 aa13.62□□□□□ -0.23
HDAC1-209ENST00000484305 LRRC32Q14392 662 aa13.62□□□□□ -0.23
HDAC1-209ENST00000484305 ZNF528Q3MIS6 628 aa13.62□□□□□ -0.23
HDAC1-209ENST00000484305 TMEM196Q5HYL7 178 aa13.62□□□□□ -0.23
HDAC1-209ENST00000484305 DGKKQ5KSL6 1271 aa13.62□□□□□ -0.23
HDAC1-209ENST00000484305 ARHGAP17Q68EM7 881 aa13.62□□□□□ -0.23
HDAC1-209ENST00000484305 FSTL4Q6MZW2 842 aa13.62□□□□□ -0.23
HDAC1-209ENST00000484305 MAMSTRQ6ZN01 415 aa13.62□□□□□ -0.23
HDAC1-209ENST00000484305 Q6ZS52 159 aa13.62□□□□□ -0.23
HDAC1-209ENST00000484305 ASCL5Q7RTU5 278 aa13.62□□□□□ -0.23
HDAC1-209ENST00000484305 UBR7Q8N806 425 aa13.62□□□□□ -0.23
HDAC1-209ENST00000484305 NKD2Q969F2 451 aaPredicted RBP13.62□□□□□ -0.23
HDAC1-209ENST00000484305 FBRSL1Q9HCM7 1045 aaKnown RBP13.62□□□□□ -0.23
HDAC1-209ENST00000484305 PNPLA8Q9NP80 782 aa13.62□□□□□ -0.23
HDAC1-209ENST00000484305 PRMT8Q9NR22 394 aaPredicted RBP13.62□□□□□ -0.23
HDAC1-209ENST00000484305 LMBRD1Q9NUN5 540 aa13.62□□□□□ -0.23
HDAC1-209ENST00000484305 OSER1Q9NX31 292 aa13.62□□□□□ -0.23
HDAC1-209ENST00000484305 CFAP97Q9P2B7 532 aa13.62□□□□□ -0.23
HDAC1-209ENST00000484305 RWDD2AQ9UIY3 292 aa13.62□□□□□ -0.23
HDAC1-209ENST00000484305 SCML2Q9UQR0 700 aa13.62□□□□□ -0.23
HDAC1-209ENST00000484305 PRR23AA6NEV1 266 aa13.61□□□□□ -0.23
HDAC1-209ENST00000484305 P4HA2O15460 535 aa13.61□□□□□ -0.23
HDAC1-209ENST00000484305 TBXAS1P24557 533 aaPredicted RBP13.61□□□□□ -0.23
HDAC1-209ENST00000484305 KIF11P52732 1056 aa13.61□□□□□ -0.23
HDAC1-209ENST00000484305 ADGRG2Q8IZP9 1017 aa13.61□□□□□ -0.23
HDAC1-209ENST00000484305 SPEM1Q8N4L4 309 aa13.61□□□□□ -0.23
HDAC1-209ENST00000484305 EHBP1Q8NDI1 1231 aa13.61□□□□□ -0.23
HDAC1-209ENST00000484305 KAT5Q92993 513 aa13.61□□□□□ -0.23
HDAC1-209ENST00000484305 NT5C1BQ96P26 610 aa13.61□□□□□ -0.23
HDAC1-209ENST00000484305 IER2Q9BTL4 223 aa13.61□□□□□ -0.23
HDAC1-209ENST00000484305 TLR8Q9NR97 1041 aaKnown RBP13.61□□□□□ -0.23
HDAC1-209ENST00000484305 C2orf42Q9NWW7 574 aa13.61□□□□□ -0.23
HDAC1-209ENST00000484305 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.61□□□□□ -0.23
HDAC1-209ENST00000484305 RIF1Q5UIP0 2472 aaKnown RBP13.61□□□□□ -0.23
HDAC1-209ENST00000484305 A0A1W2PQH9 124 aa13.6□□□□□ -0.23
HDAC1-209ENST00000484305 RNF225M0QZC1 329 aaPredicted RBP13.6□□□□□ -0.23
HDAC1-209ENST00000484305 TLR5O60602 858 aa13.6□□□□□ -0.23
HDAC1-209ENST00000484305 NFATC1O95644 943 aa13.6□□□□□ -0.23
HDAC1-209ENST00000484305 TBX18O95935 607 aa13.6□□□□□ -0.23
HDAC1-209ENST00000484305 EGFP01133 1207 aa13.6□□□□□ -0.23
HDAC1-209ENST00000484305 CCDC192P0DO97 292 aa13.6□□□□□ -0.23
HDAC1-209ENST00000484305 TDGF1P13385 188 aa13.6□□□□□ -0.23
HDAC1-209ENST00000484305 CXCL12P48061 93 aa13.6□□□□□ -0.23
HDAC1-209ENST00000484305 YWHAEP62258 255 aaKnown RBP13.6□□□□□ -0.23
HDAC1-209ENST00000484305 AMPD2Q01433 879 aa13.6□□□□□ -0.23
HDAC1-209ENST00000484305 SATB1Q01826 763 aa13.6□□□□□ -0.23
HDAC1-209ENST00000484305 CETN1Q12798 172 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms